Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20lipolytica_20[genbank_20GCA_5F900087985.1_202016-06-22]
29 sequences; 20,590,669 total letters
Query= NC_031465.1
Length=360610
Score E
Sequences producing significant alignments: (Bits) Value
seq14 127 5e-24
>seq14
Length=2997610
Score = 127 bits (140), Expect = 5e-24
Identities = 159/218 (73%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945
||||| || || ||||| ||||| ||||| || ||||||||||| |||| | |||||
Sbjct 1945184 GAGTCGCAGAACGAGATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAAAGAGTTCG 1945243
Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005
|| || || || || |||||||||||||| | ||||||||||| | |||||| ||
Sbjct 1945244 GCCGTCCTCGAGCTGCTTACCGGCGAAGATAAGTCGCTGCTGGTCCGGGGGGATTCCCTC 1945303
Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065
||| || || || || ||||| | || | | |||| || ||| || || || ||
Sbjct 1945304 CTTGTCCTGGATCTTGGACTTGACGTTGTCAATGGTGTCAGAGGACTCCACCTCGAGGGT 1945363
Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCA 152103
||||| ||||| || || ||||| || |||| ||||
Sbjct 1945364 GATAGTCTTGCCAGTAAGGGTCTTGACAAAGATTTGCA 1945401
Score = 122 bits (134), Expect = 2e-22
Identities = 159/220 (72%), Gaps = 0/220 (0%)
Strand=Plus/Plus
Query 151887 AGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTC 151946
|||| ||||| ||||| ||||| ||||| || ||||||||||| || | | ||||
Sbjct 1826622 AGTCGCAGGACGAGATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGAAAGGGTTCGG 1826681
Query 151947 CCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCC 152006
|| || || || || |||||||||||||| | ||||||||||| | ||||| |||
Sbjct 1826682 CCGTCCTCGAGCTGCTTACCGGCGAAGATAAGTCGCTGCTGGTCCGGGGGAATTCCCTCC 1826741
Query 152007 TTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTA 152066
|| || || || || ||||| | || | | |||| ||| ||| || || || ||
Sbjct 1826742 TTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACCTCGAGGGTG 1826801
Query 152067 ATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTT 152106
||||| || || || || ||||| || || | ||||||||
Sbjct 1826802 ATAGTCTTACCGGTAAGGGTCTTGACAAAAATCTGCATTT 1826841
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1153820371283459
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |