Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yarrowia_20lipolytica_20[genbank_20GCA_5F900087985.1_202016-06-22] 29 sequences; 20,590,669 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq14 188 2e-42 seq20 116 9e-21 >seq14 Length=2997610 Score = 188 bits (208), Expect = 2e-42 Identities = 173/219 (79%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| || || || || || || || || || ||||||||||||||||| ||| ||| Sbjct 1945399 CAAATCTTTGTCAAGACCCTTACTGGCAAGACTATCACCCTCGAGGTGGAGTCCTCTGAC 1945340 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| || |||||||| ||||| |||||||| || |||||||| ||||||||||| Sbjct 1945339 ACCATTGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGAATCCCCCCGGACCAGCAG 1945280 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 ||||||||||||||||| || |||||||| || || | |||||| |||| || ||| || Sbjct 1945279 CGACTTATCTTCGCCGGTAAGCAGCTCGAGGACGGCCGAACTCTTTCCGACTACAACATC 1945220 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142 || || || || || || ||||| ||| || ||||| || Sbjct 1945219 CAGAAGGAGTCCACTCTCCATCTCGTTCTGCGACTCCGA 1945181 Score = 167 bits (184), Expect = 6e-36 Identities = 166/215 (77%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || ||||| || || || || || || || || ||||||||||||||||| || ||| Sbjct 1826836 CAGATTTTTGTCAAGACCCTTACCGGTAAGACTATCACCCTCGAGGTGGAGTCTTCCGAC 1826777 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| |||||||| ||||| |||||||| || ||||| || ||||||||||| Sbjct 1826776 ACCATCGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGAATTCCCCCGGACCAGCAG 1826717 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 ||||||||||||||||| || |||||||| || || | || ||| | || || ||| || Sbjct 1826716 CGACTTATCTTCGCCGGTAAGCAGCTCGAGGACGGCCGAACCCTTTCTGACTACAACATC 1826657 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACT 178138 || || || || || || ||||| || || |||| Sbjct 1826656 CAGAAGGAGTCCACTCTCCATCTCGTCCTGCGACT 1826622 >seq20 Length=352371 Score = 116 bits (128), Expect = 9e-21 Identities = 93/112 (83%), Gaps = 0/112 (0%) Strand=Plus/Plus Query 177977 CTCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGA 178036 ||| ||||||||||| |||||||| |||||||||||||| || ||||| |||||||| Sbjct 352258 CTCCGACACCATCGACAACGTCAAGTCCAAGATTCAGGACAAGGAGGGAATTCCTCCGGA 352317 Query 178037 CCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTT 178088 |||||| ||||| || ||||| || || |||||||| ||||| | |||||| Sbjct 352318 CCAGCAGCGACTGATTTTCGCTGGTAAGCAGCTCGAGGATGGTCGAACTCTT 352369 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203730752738626