Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yarrowia_20lipolytica_20[genbank_20GCA_5F900087985.1_202016-06-22] 29 sequences; 20,590,669 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq14 150 2e-31 >seq14 Length=2997610 Score = 150 bits (166), Expect = 2e-31 Identities = 174/232 (75%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 41632 ACCGCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTC 41691 ||| || || || || || | || ||||| || ||| ||||||||| ||||| ||||| Sbjct 1826609 ACCACCACCTCGAAGTCGCAGGACGAGATGGAGAGTGGACTCCTTCTGGATGTTGTAGTC 1826668 Query 41692 GGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGC 41751 || ||||| || |||| ||||||||||| |||||||| || || ||||| ||||||| Sbjct 1826669 AGAAAGGGTTCGGCCGTCCTCGAGCTGCTTACCGGCGAAGATAAGTCGCTGCTGGTCCGG 1826728 Query 41752 GGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACT 41810 ||||| | |||||||||| ||| || ||| ||| | | | |||||| |||| Sbjct 1826729 GGGAATTCCCTCCTTGTCCTGGATCTTGGACTT-GACGTTGTCGATGGTGTCGGAAGACT 1826787 Query 41811 CCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||||||| | || || || ||||| || || ||||| || ||||||||||| Sbjct 1826788 CCACCTCGAGGGTGATAGTCTTACCGGTAAGGGTCTTGACAAAAATCTGCAT 1826839 Score = 123 bits (136), Expect = 2e-23 Identities = 165/227 (73%), Gaps = 2/227 (1%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || || || | || ||||| || ||| ||||||||| ||||| |||||||| Sbjct 1945176 CCTCCTCGGAGTCGCAGAACGAGATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAA 1945235 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || || || |||| ||||||||||| |||||||| || || ||||| ||||||| ||| Sbjct 1945236 AGAGTTCGGCCGTCCTCGAGCTGCTTACCGGCGAAGATAAGTCGCTGCTGGTCCGGGGGG 1945295 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | | |||||||||| ||| || ||| ||| | | | ||||| |||||||| Sbjct 1945296 ATTCCCTCCTTGTCCTGGATCTTGGACTT-GACGTTGTCAATGGTGTCAGAGGACTCCAC 1945354 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCA 41861 ||| | || || || || || || || ||||| || || || |||| Sbjct 1945355 CTCGAGGGTGATAGTCTTGCCAGTAAGGGTCTTGACAAAGATTTGCA 1945401 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462303832414800