Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20sp._20JCM_2030694_20[genbank_20GCA_5F001600515.1_202016-
03-01] 19 sequences; 21,758,297 total letters
Query= NC_000852.5
Length=330611
Score E
Sequences producing significant alignments: (Bits) Value
seq6 163 6e-35
seq1 120 6e-22
>seq6
Length=2655350
Score = 163 bits (180), Expect = 6e-35
Identities = 320/469 (68%), Gaps = 8/469 (2%)
Strand=Plus/Plus
Query 230173 TTTGCCGAGCGTCTCGTCGCCTGGGTGTGTGTTGAAGGTATTCTGTTTTCCGGGAGTTTC 230232
|||| |||||| || |||||| | ||||| |||||| | || ||||| |||
Sbjct 574749 TTTGGCGAGCGACTTATCGCCTTTGCTGCCGTTGAGGGTATTTTCTTCTCCGGATCTTTT 574808
Query 230233 TGCGCCATCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTCTAACGAG 230292
| |||| || ||||| ||| |||| | ||||||||||| | || ||||||
Sbjct 574809 GCCTCCATTTTCTGGCTCAAGAAGCGAGGTCTCATGCCTGGCCTGACCTTCTCCAACGAG 574868
Query 230293 TTCATCAGTCGCGACGAGGGTCTCCATCAAC-AGTTCGGCGAGCTTATGTATTCAAAGCT 230351
|||| ||| || |||||||| || || | | || | | || | | || | ||
Sbjct 574869 CTCATTTCTCGAGATGAGGGTCTGCA-CACCGACTTTGCCTGTCTGCTCTTCTCTCACCT 574927
Query 230352 CCAGAACAAGCTACCATTCGAGACG---GTCAAACAAATCATTACAGAAGCAGTTGAAAA 230408
| ||||| | ||| | | ||| | ||| | | ||||| || || |||| |
Sbjct 574928 CGAGAAC---CGACCCTCCAAGAAGATTGTCGAGGACGTCATTGTCGAGGCTGTTGGCAT 574984
Query 230409 CGAAAAGGAGTTCATTTGTGACGCTATTCCATGTCGCCTTATTGGCATGAACGCTGAACT 230468
|| |||||||| || ||| ||| | || ||| | || | || |||||||| | ||
Sbjct 574985 TGAGCAGGAGTTCCTTACTGATGCTCTCCCTTGTGGTCTGCTCGGTATGAACGCCAAGCT 575044
Query 230469 TATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTTGTTGCACTTGGTTACGAGAA 230528
||| |||||||||| || || || |||||||| | ||||||| ||||| || ||
Sbjct 575045 CATGCGACAGTACATTGAGTTTGTGGCCGACCGTCTGCTTGTTGCTCTTGGAAACCCCAA 575104
Query 230529 AGTGTACAACTCTAAGAACCCCTTTGCATTTATGGAGCTCATTTCGCTTCAAGGGAAGAC 230588
|| |||||||| | |||||||||| || |||||| |||||| || || |||||
Sbjct 575105 GGTCTACAACTCCACCAACCCCTTTGACTTCATGGAGAACATTTCTCTGGCTGGAAAGAC 575164
Query 230589 CAACTTCTTCGAAAAGCGTGTCAGTGACTATCAGAGGCCTGGTGTGATG 230637
|||||||||||| ||||| || |||||| |||| | | ||||| |||
Sbjct 575165 CAACTTCTTCGAGAAGCGAGTGTCTGACTACCAGAAGGCCGGTGTCATG 575213
>seq1
Length=4845111
Score = 120 bits (132), Expect = 6e-22
Identities = 131/174 (75%), Gaps = 0/174 (0%)
Strand=Plus/Plus
Query 319857 GGGGAACCCTTCAAGCTGGCCGTTCACAATAGCGCGCATCAGGGTTGATTTACCCGCCCC 319916
|||||| || || | ||||||||| |||| || |||||||| || || ||||| || ||
Sbjct 2675900 GGGGAAACCCTCGACCTGGCCGTTGGCAATGGCTCGCATCAGAGTAGACTTACCAGCACC 2675959
Query 319917 GTTTGGCCCACACAGACCGTAGCGGTTTCCGCGTTTCAGGTTGAACCGCGTGTTGTTCAG 319976
||| || |||||||||||||| || || || || || | | | || ||||||
Sbjct 2675960 GTTGGGGCCACACAGACCGTATCGTCGGCCTCGCTTGAGACGCAGCTGGGTTCGGTTCAG 2676019
Query 319977 AAGAATTTTTCCACCATATGCCAGAGAAAATTCACAATCACACAGATCCTCACC 320030
||||| || |||| || |||||||| || ||||| | |||||||||||||||
Sbjct 2676020 CAGAATCTTGGCACCGTAAGCCAGAGAGAACTCACAGTTACACAGATCCTCACC 2676073
Score = 96.9 bits (106), Expect = 7e-15
Identities = 244/361 (68%), Gaps = 14/361 (4%)
Strand=Plus/Plus
Query 319313 TGATACCCTCGAGGAACCCGGGCTCGGGGAACTTCCACGTGGTCTTCGTCTCGGTAAGGG 319372
||| |||||| ||||| |||||||||||||| | || ||| | | ||
Sbjct 2675368 TGACACCCTCAAGGAAACCGGGCTCGGGGAAGGAGAAGTTGATCTCGGAGGCTCCCAGCT 2675427
Query 319373 CGTAGTA--ACTCG-CTGATTCGGGACGCTTCTTCACGAACTCGGACAGATTTCCCTTGT 319429
||||||| ||| | | || || || |||||| || |||||||| || || |||||||
Sbjct 2675428 CGTAGTAGGACTTGGCGGAA--GGCAC-CTTCTTGACAAACTCGGAGAGGTTACCCTTGT 2675484
Query 319430 ACTTCTTCAGCTTTAGGTTAGGTTCGTAATGGATAATAGAGGTGCAAACAGCGTCGAGGA 319489
|||| |||||| | | ||||| |||||||| | ||| || ||||||||
Sbjct 2675485 ACTTTCGCAGCTT---GAATCGCTCGTAGTGGATAATGTACTCGCAGACGTTGTCGAGGA 2675541
Query 319490 ACCCGGAGTCGTGTGACACAATCACGCACGAAACGTCCTTAAGGTTGATCAGGTATTCAA 319549
| || ||||| || ||||| || | | | | | | | ||| || | ||||| | |
Sbjct 2675542 AACCAGAGTCATGGGACACGATGATGGAGGTGA--TACCACAGG-TGTTGAGGTAGTTGA 2675598
Query 319550 TCAACCACCTCACGTTAGAC-ACAGAAAGATGGTTGGTCGGCTCGTCAAGAAGCAGTAGC 319608
|||||| |||||| ||| | ||||||||||| ||||| ||||| ||||| |
Sbjct 2675599 CCAACCAGGCCACGTT-GACGGTATCCAGATGGTTGGTGGGCTCATCAAGCAGCAGGATA 2675657
Query 319609 TTTGCGTTCAGGAGCATTGCACGTGCAAGAGCGAGTTTCATTTTCCACCCTCCGGAAAGA 319668
| || || | || | || || ||||| || ||||| ||||| |||||||| |||
Sbjct 2675658 TCGGCCTTTCGCAGAACGGCGGTGGCCAGAGCCAGCTTCATCTTCCATCCTCCGGACAGA 2675717
Query 319669 G 319669
|
Sbjct 2675718 G 2675718
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1057823742485970
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |