Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20sp._20JCM_2030694_20[genbank_20GCA_5F001600515.1_202016-
03-01] 19 sequences; 21,758,297 total letters
Query= NC_001132.2
Length=161773
Score E
Sequences producing significant alignments: (Bits) Value
seq6 163 3e-35
>seq6
Length=2655350
Score = 163 bits (180), Expect = 3e-35
Identities = 391/588 (66%), Gaps = 15/588 (3%)
Strand=Plus/Minus
Query 16960 CAGACATGCGAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGT 17019
|||||| || || ||| || | ||||| |||| || || ||||| || || ||
Sbjct 574913 CAGACAGGCAAAGTCGGTGTGCAGACCCTCATCTCGAGAAATGAGCTCGTTGGAGAAGGT 574854
Query 17020 CAACCCGGGCATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAA 17079
|| || ||||| ||||| ||||| | ||| || || | ||| || || || || ||
Sbjct 574853 CAGGCCAGGCATGAGACCTCGCTTCTTGAGCCAGAAAATGGAGGCAAAAGATCCGGAGAA 574794
Query 17080 GAATATACCCTCGACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTT 17139
||| |||||||| |||| ||||| ||||| | ||| ||| | | || | || | ||
Sbjct 574793 GAAAATACCCTCAACGGCAGCAAAGGCGATAAGTCGCTCGCCAAAGGTAGACTCGTCGTC 574734
Query 17140 ACGAATCCATTTCTGCACCCACTCGGCTTTTTGCTTTATGCAATCCATCGTTTCTATGGC 17199
||||| || | |||| ||||| || | ||| ||||| || || || |||||
Sbjct 574733 GGAGATCCACTTGAGAGCCCAGTCGGCCTTCTTCTTGATGCAGGGAATGGTCTCAATGGC 574674
Query 17200 CTTAAA----TAATTTCTCTTTTTCCTGTAGGTCGATTATATACGTATCGATGAGTAGGC 17255
|| || ||| ||| || ||| |||| | || || ||||| ||||| ||
Sbjct 574673 GTTGAACAGGTAAGTTCGCT----CCTTGGGGTCCTTGATGTAAGTATCAATGAGCAGAG 574618
Query 17256 TGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCTT 17315
||| | ||||| || ||||||||||| ||||| |||||||| ||||| ||| |
Sbjct 574617 AGTAGGTCTCGGAATGGATGTTCTCCATCATGATCTGGAATCCGTAGAAGCACTTGGCCT 574558
Query 17316 CCGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGATTTTCGTTCACGATGCCGTCGC 17375
| | ||||| || | |||| || || | || || ||||| || || |||||
Sbjct 574557 CAGGAGCCTGAACCTCTCCAGAGAACCGCTCAACCAGGTTCTCGTTGACAATACCGTCAG 574498
Query 17376 TCGCGGCGAAAAACGCCAATATATGCTTAATGAAATATTTTTCGTCCGGTGTAAGAACGC 17435
|| || || || |||| | ||| ||||||| | || |||| || ||| || |
Sbjct 574497 AGGCAGCAAAGAAAGCCAGCACGTGCGAAATGAAAAACTTCTCGT-CGCTGT-TGAGCCG 574440
Query 17436 G-----CCAGTCCTTTAAATCTTTGGATATATCCACTTCTTCGGGGGTCCAAAAACTAGC 17490
| |||||| | ||| ||| | ||| | || |||| |||||| ||| |||
Sbjct 574439 GTTCTCCCAGTCGCCCATATCCTTGCCGAGATCAATCTCCTCGGCGGTCCAGAAAGAAGC 574380
Query 17491 CACTGCCTTTTTATACATATTCCAAATATCATTGTATTGTATGGGGAA 17538
| | ||||| || ||||| | |||||| |||| ||| || || |||||
Sbjct 574379 CTCGGCCTTCTTGTACATCTGCCAAATCTCATGGTACTGAATAGGGAA 574332
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 517545477082920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |