Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20sp._20JCM_2030694_20[genbank_20GCA_5F001600515.1_202016-
03-01] 19 sequences; 21,758,297 total letters
Query= NC_001266.1
Length=159857
Score E
Sequences producing significant alignments: (Bits) Value
seq6 141 1e-28
>seq6
Length=2655350
Score = 141 bits (156), Expect = 1e-28
Identities = 385/586 (66%), Gaps = 14/586 (2%)
Strand=Plus/Minus
Query 16199 AGACACGCGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTT 16258
||||| || |||||| || || || || |||| || || |||||||| || ||
Sbjct 574912 AGACAGGCAAAGTCGGTGTGCAGACCCTCATCTCGAGAAATGAGCTCGTTGGAGAAGGTC 574853
Query 16259 AACCCTGGCATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCAAATGACCCCGAAAAG 16318
| || ||||| ||||| ||||| | |||||| || | ||||| || || || |||
Sbjct 574852 AGGCCAGGCATGAGACCTCGCTTCTTGAGCCAGAAAATGGAGGCAAAAGATCCGGAGAAG 574793
Query 16319 AATATACCCTCAACAGATGCAAAAGCGATTAATCGTTCCGCGTACGTAGCATCTTTATTA 16378
|| ||||||||||| | ||||| ||||| | ||| || | | |||| || | |
Sbjct 574792 AAAATACCCTCAACGGCAGCAAAGGCGATAAGTCGCTCGCCAAAGGTAGACTCGTCGTCG 574733
Query 16379 CGAATCCATTTCTGTACCCATTCGGCTTTTTGTTTTATACAATCCATCGTTTCTATGGCC 16438
||||| || | |||| ||||| || | || || || || || || |||||
Sbjct 574732 GAGATCCACTTGAGAGCCCAGTCGGCCTTCTTCTTGATGCAGGGAATGGTCTCAATGGCG 574673
Query 16439 TTAAAC----AATTTCTCTTTTTCCTGAATATCGATTATATACGTATCAATCAGTAAACT 16494
|| ||| || ||| | |||| || | || || |||||||| || | |
Sbjct 574672 TTGAACAGGTAAGTTCGC----TCCTTGGGGTCCTTGATGTAAGTATCAATGAGCAGAGA 574617
Query 16495 GTACATTTCTGAGTGTATGTTCTCTATGGCTATCTGAAATCCATAGAAGCATCGAGCCTC 16554
||| | || || || |||||||| || ||||| ||||| |||||||| |||||
Sbjct 574616 GTAGGTCTCGGAATGGATGTTCTCCATCATGATCTGGAATCCGTAGAAGCACTTGGCCTC 574557
Query 16555 CGCTATTTGTACTTCCACGTAAAATCGTTCCGCCAGGTTCTCATTCACGATACCGTCACT 16614
| || || || | | || || || |||||||||| || || |||||||||
Sbjct 574556 AGGAGCCTGAACCTCTCCAGAGAACCGCTCAACCAGGTTCTCGTTGACAATACCGTCAGA 574497
Query 16615 TGCAGCAAAAAACGCCAATATGTGCTTAATGAAATATTTTTCGTCAGATGT----AAGAA 16670
|||||||| || |||| | |||| ||||||| | || ||||| | ||| |
Sbjct 574496 GGCAGCAAAGAAAGCCAGCACGTGCGAAATGAAAAACTTCTCGTC-GCTGTTGAGCCGGT 574438
Query 16671 TATGCCAATCTTTTAAATCTTTGGATATATCCACTTCTTCTGGCGTCCAAAAGCTAGCCA 16730
| | ||| || | ||| ||| | ||| | || || | ||||| || ||||
Sbjct 574437 TCTCCCAGTCGCCCATATCCTTGCCGAGATCAATCTCCTCGGCGGTCCAGAAAGAAGCCT 574378
Query 16731 CTGCCTTTTTATACATTTTCCAAATATCATTGTATTGTAT-GGGAA 16775
| ||||| || ||||| | |||||| |||| ||| || || |||||
Sbjct 574377 CGGCCTTCTTGTACATCTGCCAAATCTCATGGTACTGAATAGGGAA 574332
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 511414278539080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |