Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yarrowia_20sp._20JCM_2030694_20[genbank_20GCA_5F001600515.1_202016- 03-01] 19 sequences; 21,758,297 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq6 141 1e-28 >seq6 Length=2655350 Score = 141 bits (156), Expect = 1e-28 Identities = 385/586 (66%), Gaps = 14/586 (2%) Strand=Plus/Minus Query 16199 AGACACGCGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTT 16258 ||||| || |||||| || || || || |||| || || |||||||| || || Sbjct 574912 AGACAGGCAAAGTCGGTGTGCAGACCCTCATCTCGAGAAATGAGCTCGTTGGAGAAGGTC 574853 Query 16259 AACCCTGGCATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCAAATGACCCCGAAAAG 16318 | || ||||| ||||| ||||| | |||||| || | ||||| || || || ||| Sbjct 574852 AGGCCAGGCATGAGACCTCGCTTCTTGAGCCAGAAAATGGAGGCAAAAGATCCGGAGAAG 574793 Query 16319 AATATACCCTCAACAGATGCAAAAGCGATTAATCGTTCCGCGTACGTAGCATCTTTATTA 16378 || ||||||||||| | ||||| ||||| | ||| || | | |||| || | | Sbjct 574792 AAAATACCCTCAACGGCAGCAAAGGCGATAAGTCGCTCGCCAAAGGTAGACTCGTCGTCG 574733 Query 16379 CGAATCCATTTCTGTACCCATTCGGCTTTTTGTTTTATACAATCCATCGTTTCTATGGCC 16438 ||||| || | |||| ||||| || | || || || || || || ||||| Sbjct 574732 GAGATCCACTTGAGAGCCCAGTCGGCCTTCTTCTTGATGCAGGGAATGGTCTCAATGGCG 574673 Query 16439 TTAAAC----AATTTCTCTTTTTCCTGAATATCGATTATATACGTATCAATCAGTAAACT 16494 || ||| || ||| | |||| || | || || |||||||| || | | Sbjct 574672 TTGAACAGGTAAGTTCGC----TCCTTGGGGTCCTTGATGTAAGTATCAATGAGCAGAGA 574617 Query 16495 GTACATTTCTGAGTGTATGTTCTCTATGGCTATCTGAAATCCATAGAAGCATCGAGCCTC 16554 ||| | || || || |||||||| || ||||| ||||| |||||||| ||||| Sbjct 574616 GTAGGTCTCGGAATGGATGTTCTCCATCATGATCTGGAATCCGTAGAAGCACTTGGCCTC 574557 Query 16555 CGCTATTTGTACTTCCACGTAAAATCGTTCCGCCAGGTTCTCATTCACGATACCGTCACT 16614 | || || || | | || || || |||||||||| || || ||||||||| Sbjct 574556 AGGAGCCTGAACCTCTCCAGAGAACCGCTCAACCAGGTTCTCGTTGACAATACCGTCAGA 574497 Query 16615 TGCAGCAAAAAACGCCAATATGTGCTTAATGAAATATTTTTCGTCAGATGT----AAGAA 16670 |||||||| || |||| | |||| ||||||| | || ||||| | ||| | Sbjct 574496 GGCAGCAAAGAAAGCCAGCACGTGCGAAATGAAAAACTTCTCGTC-GCTGTTGAGCCGGT 574438 Query 16671 TATGCCAATCTTTTAAATCTTTGGATATATCCACTTCTTCTGGCGTCCAAAAGCTAGCCA 16730 | | ||| || | ||| ||| | ||| | || || | ||||| || |||| Sbjct 574437 TCTCCCAGTCGCCCATATCCTTGCCGAGATCAATCTCCTCGGCGGTCCAGAAAGAAGCCT 574378 Query 16731 CTGCCTTTTTATACATTTTCCAAATATCATTGTATTGTAT-GGGAA 16775 | ||||| || ||||| | |||||| |||| ||| || || ||||| Sbjct 574377 CGGCCTTCTTGTACATCTGCCAAATCTCATGGTACTGAATAGGGAA 574332 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511414278539080