Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20sp._20JCM_2030694_20[genbank_20GCA_5F001600515.1_202016-
03-01] 19 sequences; 21,758,297 total letters
Query= NC_001611.1
Length=185578
Score E
Sequences producing significant alignments: (Bits) Value
seq6 205 1e-47
seq5 165 1e-35
>seq6
Length=2655350
Score = 205 bits (226), Expect = 1e-47
Identities = 402/592 (68%), Gaps = 8/592 (1%)
Strand=Plus/Minus
Query 24131 CAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGT 24190
|| ||| || || ||| ||| |||||||| |||| | ||| | |||||||| || ||
Sbjct 574913 CAGACAGGCAAAGTCGGTGTGCAGACCCTCATCTCGAGAAATGAGCTCGTTGGAGAAGGT 574854
Query 24191 GAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAA 24250
|| || ||||| || || ||||| || ||||| || ||||| ||||| ||||| || ||
Sbjct 574853 CAGGCCAGGCATGAGACCTCGCTTCTTGAGCCAGAAAATGGAGGCAAAAGATCCGGAGAA 574794
Query 24251 GAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTTTCTCCATAACCGG---CGCTGTC 24307
|||||| || || || || |||||||| ||||||| || ||| | | || |||
Sbjct 574793 GAAAATACCCTCAACGGCAGCAAAGGCGATAAGTCGCTCGCCAAAGGTAGACTCGTCGTC 574734
Query 24308 ATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGC 24367
|||||||| ||||||| ||||||||||| || | || || || ||||| || ||
Sbjct 574733 GGAGATCCACTTGAGAGCCCAGTCGGCCTTCTTCTTGATGCAGGGAATGGTCTCAATGGC 574674
Query 24368 ATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATA 24427
|| || || || || || || || || | || |||||||| | ||| ||
Sbjct 574673 GTTGAACAGGTAAGTTCGCTCCTTGGGGTCCTTGATGTAAGTATCAATGAGCAGAGAGTA 574614
Query 24428 CATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGT 24487
| || ||||| ||||| || || || || ||||||||||| || | ||||| |
Sbjct 574613 GGTCTCGGAATGGATGTTCTCCATCATGATCTGGAATCCGTAGAAGCACTTGGCCTCAGG 574554
Query 24488 AATCTGTACTTCTATACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGC 24547
| ||| || ||| | | || || || | | || || || || || |||||| |||
Sbjct 574553 AGCCTGAACCTCTCCAGAGAACCGCTCAACCAGGTTCTCGTTGACAATACCGTCAGAGGC 574494
Query 24548 TGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTT----AGTTTAT 24603
||||| || |||| || || || ||| | || ||||| | |||| | || |
Sbjct 574493 AGCAAAGAAAGCCAGCACGTGCGAAATGAAAAACTTCTCGTC-GCTGTTGAGCCGGTTCT 574435
Query 24604 TCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTG 24663
||| || ||||| || | ||| | || || | ||||| || || ||||| |
Sbjct 574434 CCCAGTCGCCCATATCCTTGCCGAGATCAATCTCCTCGGCGGTCCAGAAAGAAGCCTCGG 574375
Query 24664 CCTTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAA 24715
|||| || ||||| | ||| || ||||| || ||||| || || | |||||
Sbjct 574374 CCTTCTTGTACATCTGCCAAATCTCATGGTACTGAATAGGGAAGAGCACAAA 574323
>seq5
Length=2743614
Score = 165 bits (182), Expect = 1e-35
Identities = 622/949 (66%), Gaps = 40/949 (4%)
Strand=Plus/Minus
Query 53710 AGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCA 53769
||| |||||||||||||| || || || | || | || ||||| || |||||||| ||
Sbjct 1439859 AGAAGCCAGATTACAAACAGCAACTTCTTCAGGAGACGAGTATTGAATAATCTCAGTACA 1439800
Query 53770 AAGATTACTAC-ACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCAT 53828
| ||| | || | ||||| || || | ||| || || || || |||||| |
Sbjct 1439799 CAAATT-CGACGATTTGATCGTACCGAGATTCTGCTGGTTGGATTTCGCGTTACAGCTGT 1439741
Query 53829 CCTTATAAAGAATGAATGGCGTACCAGTTTCAATCTGGGATTCT--ATAATCGCTTTCCA 53886
| ||||| || ||||| || || ||||| || || | || | |||||| || |
Sbjct 1439740 CTTTATACAGCATGAACGGACCTCCTGTTTCGATTTG--ACTCGTGAGAATCGCCTTGAA 1439683
Query 53887 GACGACACGAGCCTTTATTATAGATTTGTAT---CTCTT-TTCTCTTTCGTATAGTGTAT 53942
| | |||| || ||| ||| ||||| | ||| ||||| | | || ||
Sbjct 1439682 CAGCTCCTGAGCGTTGATTTGAGAATTGTACAGCCCCTTCTTCTCATACTCATTGT---- 1439627
Query 53943 ACAATCGTTCAAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGA-CAC 54001
|||| | || || ||||||||||| |||| ||| ||| ||| | | || || ||
Sbjct 1439626 ACAACCTCTCGAAATCGTCTCCCCAGACATCAGCCAGTCCTGGAGCT-CTTCTGGGGCAG 1439568
Query 54002 ATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGA 54061
| | |||||| | | || | | | ||| ||||||||| | |||||| | ||| |||
Sbjct 1439567 AAAAGCGACCATTTTTCGCCGTTTTCGACTTTTTTCATAAACAAATCAGGCACCCAGAGA 1439508
Query 54062 GCTATA-AATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAG 54120
|| ||| || || || | | ||| | |||||| || ||| ||| | || ||
Sbjct 1439507 GC-ATAGAACAGGTCACGTGCTCTGTTTTCCTCTGCGCCATGATTTTTTCGCAAATTCAG 1439449
Query 54121 GAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGTCATAACTCCAGGCCGTTT 54180
|| ||| |||||| | |||||| || ||||| || | | | ||||||| |||||
Sbjct 1439448 AAAATCCAAAATATCCGCATGCCAAGGCTCCAAATACACTGCAAACGCTCCAGGTCGTTT 1439389
Query 54181 GTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAAT 54240
|||||| || ||||| | ||| | ||||| || || | ||||| | ||| |||| ||
Sbjct 1439388 GTTTCCCCCTTGATCAACGTACCGTGCGGTATTGTTGAACACTCTGAGCATGGGAACGAT 1439329
Query 54241 ACCATTGGATGCACCATTGGTCCCGGAGAT-ATAGCTTCCACTGGCACGAATATTACTAA 54299
||| || || | | || | || | ||| ||| |||| | || || ||
Sbjct 1439328 ACCTGAAGACCGTCCTTGAGAACCTGTAATGAGAGC-TCCTTTGGCTCTGATGTTGTGAA 1439270
Query 54300 TTGATAGACCTATCCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTT-AACGTATCA 54358
| |||||||| || ||||| |||| || || || || |||||| | ||| ||
Sbjct 1439269 TATGCAGACCTATACCTCCTGCTGTTTTGGAAATCTGAGCACA-CGTTTTGAGCGTGTCG 1439211
Query 54359 TAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGA 54418
|||||||| || || || | |||| || ||||||||| ||| | |||
Sbjct 1439210 TAGATGCCGTCAATGGAGTCTGCTGCCATGGCAACGAGAAAACAG---GACGAAAGCTGA 1439154
Query 54419 C---GACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAG-- 54473
| || ||| || ||||| || |||||||||||||| || || ||| ||| | ||
Sbjct 1439153 CCCTGAGGAGTACCTGCATTGAACAAGGTAGGAGAAGCATGAGTGAAC--TTTCTGAGAG 1439096
Query 54474 --AAAGTAGATTGTACGTCTCGA-TAGCTGAGTCTATATCCCATTGATGAATTCCTACTG 54530
|||| ||| |||||| |||| | || || |||| | || || ||| ||
Sbjct 1439095 ATAAAGCAGA--GTACGTTTCGAGCACCTTGGT-GGTATCGTCTCCGTGGATGGCTAGTG 1439039
Query 54531 CGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGT-TGTTTATTTTCAGCAAG 54589
|| ||||| | ||| || ||||||||||| || | || || | ||| ||| | |
Sbjct 1439038 ATACTCGCATGAGCATCTGTTGAGGTCTTTCCACTA-CTCGTCCCTGGATTCTCAAAAGG 1438980
Query 54590 TAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTC 54638
|| ||||||||||| || || || ||||| ||| ||| | | |||||
Sbjct 1438979 TACGATTTTTCCAACGTCTTGAATCCAAAGTAGGAGTAAGTGAGGTCTC 1438931
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 593721458991120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |