Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20sp._20JCM_2030694_20[genbank_20GCA_5F001600515.1_202016-
03-01] 19 sequences; 21,758,297 total letters
Query= NC_002593.1
Length=100999
Score E
Sequences producing significant alignments: (Bits) Value
seq1 116 2e-21
seq2 114 8e-21
>seq1
Length=4845111
Score = 116 bits (128), Expect = 2e-21
Identities = 153/212 (72%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237
|| ||||| || | |||| || ||||| ||||||||||||||||| || | ||
Sbjct 2007197 AGGACCAGATGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGGACAGAGTTCGTCCATCT 2007256
Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297
|| | |||||| || ||||||||||| ||||||||||| ||| | | |||||||||
Sbjct 2007257 TCGAGCTGCTTACCAGCGAAAATGAGTCGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCC 2007316
Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357
||||| ||| | || | | || | |||| || ||||| || | || |||||
Sbjct 2007317 TGAATCTTGGACTTGACATTGTCAATGGTGTCGGAGGACTCGACCTCAAGGGTAATGGTC 2007376
Query 34358 TTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|| || ||||| || ||||| || ||||||||
Sbjct 2007377 TTTCCAGTGAGGGTCTTCACGAAAATCTGCAT 2007408
Score = 105 bits (116), Expect = 4e-18
Identities = 138/191 (72%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258
|| ||||| ||||||||||| ||||| || |||| || | |||||| || ||||||
Sbjct 2007446 TCCTTCTGGATGTTGTAGTCAGACAGAGTTCGTCCGTCCTCAAGCTGCTTTCCAGCGAAA 2007505
Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCG 34318
||||| ||||||||||| ||| | | ||||||||| ||||| ||| | | |
Sbjct 2007506 ATGAGTCGCTGCTGGTCCGGGGGGATTCCCTCCTTGTCCTGAATCTTGGACTTGACGTTG 2007565
Query 34319 GCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACA 34378
| || | || | || ||||| || | ||||| || |||||||| || || || ||
Sbjct 2007566 TCAATGGTGTCAGAAGACTCGACCTCAAGGGTGATAGTCTTGCCGGTCAGGGTCTTGACG 2007625
Query 34379 AAGATCTGCAT 34389
|||||||||||
Sbjct 2007626 AAGATCTGCAT 2007636
Score = 98.7 bits (108), Expect = 6e-16
Identities = 149/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237
||||| ||||| | ||| ||| ||||| ||||| ||||| || || || ||||
Sbjct 2006546 AGCACAAGGTGGAGAGTGGATTCCTTCTGGATGTTATAGTCAGAAAGGGTTCGTCCGTCC 2006605
Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297
|| | |||||| || ||||| || || ||||||||||| ||| | | |||||||||
Sbjct 2006606 TCAAGCTGCTTACCGGCGAAGATAAGTCGCTGCTGGTCCGGGGGGATACCCTCCTTGTCC 2006665
Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357
||||| ||| | | | | || | |||| || || || || | ||||| ||
Sbjct 2006666 TGGATCTTGGACTTGACGTTGTCAATGGTGTCGGAGGACTCAACCTCAAGAGTGATAGTC 2006725
Query 34358 TTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|| || || ||||| || ||||||||||||||
Sbjct 2006726 TTTCCAGTCAGAGTCTTGACAAAGATCTGCAT 2006757
Score = 87.8 bits (96), Expect = 1e-12
Identities = 134/191 (70%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258
|| ||||| |||||||| || ||||| || | || || | |||||| || |||||
Sbjct 2006990 TCCTTCTGGATGTTGTAATCAGACAGAGTTCGTCCATCCTCAAGCTGCTTACCGGCGAAG 2007049
Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCG 34318
|| || ||||||||||| ||| | | ||||||||| ||||| ||| | | |
Sbjct 2007050 ATAAGTCGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCCTGAATCTTAGACTTGACGTTG 2007109
Query 34319 GCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACA 34378
| || | || | || || || || | |||||||| || || || ||||| || |||
Sbjct 2007110 TCAATGGTGTCAGAAGACTCAACCTCGAGGGTGATGGTCTTTCCAGTCAGAGTCTTGACA 2007169
Query 34379 AAGATCTGCAT 34389
|||||||||||
Sbjct 2007170 AAGATCTGCAT 2007180
>seq2
Length=4150472
Score = 114 bits (126), Expect = 8e-21
Identities = 161/226 (71%), Gaps = 0/226 (0%)
Strand=Plus/Plus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
|| || || || | ||| || || || | ||| || ||||| ||||||||||| ||
Sbjct 3374809 CCACCTCGGAGTCGCAGAACAAGATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGAG 3374868
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282
|| ||| |||| || | ||||||||| ||||||||||| ||||||||||| |||
Sbjct 3374869 AGAGTTCGGCCGTCCTCGAGCTGCTTGCCGGCGAAAATGAGTCGCTGCTGGTCCGGGGGA 3374928
Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342
| || ||||||||| ||||| ||| | | | | || | |||| || || ||
Sbjct 3374929 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCAATGGTGTCGGAAGACTCCACC 3374988
Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCA 34388
|| | |||||||| ||||| || || || || |||||||| ||||
Sbjct 3374989 TCGAGGGTGATGGTCTTGCCAGTAAGGGTCTTGACAAAGATTTGCA 3375034
Score = 95.1 bits (104), Expect = 8e-15
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
|| || || || | ||| || || || | ||| || ||||| ||||||||||| ||
Sbjct 3070617 CCACCTCGGAGTCGCAGAACGAGATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGAA 3070558
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282
|| ||| |||| || | |||||| || ||||| || || ||||||||||| |||
Sbjct 3070557 AGGGTTCGGCCGTCCTCGAGCTGCTTACCGGCGAAGATAAGTCGCTGCTGGTCCGGGGGA 3070498
Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342
| | ||||||||| ||||| ||| | | | | || | |||| || || ||
Sbjct 3070497 ATTCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACC 3070438
Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|| | ||||| || || ||||| || || || ||||| ||||||||
Sbjct 3070437 TCAAGGGTGATAGTCTTACCGGTAAGGGTCTTGACAAAAATCTGCAT 3070391
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 323071925188640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |