Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yarrowia_20sp._20JCM_2030694_20[genbank_20GCA_5F001600515.1_202016- 03-01] 19 sequences; 21,758,297 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq7 113 4e-20 >seq7 Length=1104867 Score = 113 bits (124), Expect = 4e-20 Identities = 275/420 (65%), Gaps = 15/420 (4%) Strand=Plus/Plus Query 20196 TGGATTTGACAACCGTCAAGAGGGGGATTTGGGTCCTGTGTATGGATTTCAATGGAGACA 20255 |||||| | |||| | || || ||| |||| ||||| ||||| || |||||| | || Sbjct 845205 TGGATTGGGACACCGACGTGAAGGTGATCTGGGACCTGTCTATGGCTTCCAATGGCGTCA 845264 Query 20256 TTTTGGAGCTGAATATGTTGACATGAACACAAATTATTTTGGACAAGGAGTAGATCAATT 20315 ||||||||| || || || ||||| |||| || || || || ||||| | Sbjct 845265 TTTTGGAGCAGAGTACAAGGATTGTGACACAGATTACACCGGTCAGGGTGTGGATCAGCT 845324 Query 20316 ACAAAATGTTATTAATTTAATTAAAACGAACCCAAACGACAGAAGAATTATTTTATGCGC 20375 || | || ||| | | ||||| ||||| | |||||| |||| ||| | | || Sbjct 845325 CAAACAGGTGATTCACACTCTGAAAACTAACCCTCAAGACAGACGAATCATTCTTTCAGC 845384 Query 20376 CTGGAACGCTAAAGATGTGCCTTTAATGGCTTTGCCTCCATGTCATATGCTATGCCAATT 20435 ||||||| | || || | |||||| ||||||| ||||| ||| | ||||| || Sbjct 845385 CTGGAACCCCGCTGACCTGAAAATCATGGCTCTGCCTCCTTGTCACATGTTTTGCCAGTT 845444 Query 20436 TTACGTTGCTAATAATGA---------------ATTGTCGTGTCAAATGTATCAACGATC 20480 |||||| | | || || ||||| || ||| |||| || || || Sbjct 845445 TTACGTGTCGTACAAAGACTCTGAGCGAGGTCGGTTGTCATGCCAACTGTACCAGCGGTC 845504 Query 20481 CGCTGATATGGGACTGGGTGTTCCTTTCAATATTGCAAGTTATGCGCTGCTTACGTATAT 20540 ||| ||||||| |||||||| |||||||| || || || |||| || || Sbjct 845505 ATGTGACTTGGGACTCGGTGTTCCCTTCAATATCGCGTCGTACGCTTTGCTCACACGAAT 845564 Query 20541 GATTGCACATGTTACAGATTTAAAAACGGGTGACTTAGTCCACACCATAGGAGACGCGCA 20600 |||||| || || || ||| | | || || | | ||||| || ||||||||||| Sbjct 845565 GATTGCCCAGGTGACGGATCTGGACTGTGGAGAGCTCATTCACACTATGGGAGACGCGCA 845624 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399183907563955