Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yarrowia_20sp._20JCM_2030694_20[genbank_20GCA_5F001600515.1_202016- 03-01] 19 sequences; 21,758,297 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq6 118 2e-21 >seq6 Length=2655350 Score = 118 bits (130), Expect = 2e-21 Identities = 340/511 (67%), Gaps = 23/511 (5%) Strand=Plus/Plus Query 101843 TTCCCCGCCATCAAGAAGAAGGAGCAGTGGGCTATTAATTGGATG--CAAAG-CAA---T 101896 ||||| || ||||||||||||| | |||||| | || ||||| | | | | | | Sbjct 574687 TTCCCTGC-ATCAAGAAGAAGGCCGACTGGGCTCTCAAGTGGATCTCCGACGACGAGTCT 574745 Query 101897 AACGATTTGGCGGAACTAATTGTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGT 101956 | | ||||||| | | | || | ||||||||||| ||||| || || ||||| || Sbjct 574746 ACC--TTTGGCG-AGCGACTTATCGCCTTTGCTGCCGTTGAGGGTATTTTCTTCTCCGGA 574802 Query 101957 GCATTCGCATCCATTTTCTGGATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCC 102016 | || || |||||||||||| ||||||| | ||| | ||||||| || |||| |||| Sbjct 574803 TCTTTTGCCTCCATTTTCTGGCTCAAGAAGCGAGGTCTCATGCCTGGCCTGACCTTCTCC 574862 Query 102017 AATGAGTTCATTTCTAGGGACGAAGGTCTTCATCGCGACTTTGCATGCATGCTGTTGAAA 102076 || ||| |||||||| | || || ||||| || ||||||||| || |||| || Sbjct 574863 AACGAGCTCATTTCTCGAGATGAGGGTCTGCACACCGACTTTGCCTGTCTGCTCTTCTCT 574922 Query 102077 AAGGGTTTTGTTGATACC--CCATCAAGAGAAAGGATTCTTGAAATTGTCACT---GAAG 102131 | | || ||| || || | |||| |||| | || |||| | || | Sbjct 574923 CA----CCTCGAGA-ACCGACCCTCCA-AGAA--GATTGTCGAGGACGTCATTGTCGAGG 574974 Query 102132 CCGTCCGAATTGAACAAGAATTTCTCACAGTTTCCCTGCCTGTTAAATTAGTGGGAATGA 102191 | || | ||||| || || || || || | | | || ||| | | | || |||| Sbjct 574975 CTGTTGGCATTGAGCAGGAGTTCCTTACTGATGCTCTCCCTTGTGGTCTGCTCGGTATGA 575034 Query 102192 ACTGCAAGTTGATGAGCCAGTACATTGAATTTGTGGCAGATAAACTATTGGTTGAAATGG 102251 || |||| | ||| | ||||||||||| |||||||| || || | |||| | | Sbjct 575035 ACGCCAAGCTCATGCGACAGTACATTGAGTTTGTGGCCGACCGTCTGCTTGTTGCTCTTG 575094 Query 102252 GACTAGAAAAGCACTATAATGTTACCAACCCCTTCCCATTCATGGACAATATTTCCCTCG 102311 || ||| ||| || ||||||||||| |||||||| || ||||| || | Sbjct 575095 GAAACCCCAAGGTCTACAACTCCACCAACCCCTTTGACTTCATGGAGAACATTTCTCTGG 575154 Query 102312 AGAATAAGACCAACTTTTTTGAAAAGAGAGT 102342 ||||||||||| || || ||| |||| Sbjct 575155 CTGGAAAGACCAACTTCTTCGAGAAGCGAGT 575185 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989583759098145