Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20sp._20JCM_2030694_20[genbank_20GCA_5F001600515.1_202016-
03-01] 19 sequences; 21,758,297 total letters
Query= NC_003310.1
Length=196858
Score E
Sequences producing significant alignments: (Bits) Value
seq6 210 3e-49
seq5 199 5e-46
>seq6
Length=2655350
Score = 210 bits (232), Expect = 3e-49
Identities = 403/592 (68%), Gaps = 8/592 (1%)
Strand=Plus/Minus
Query 33578 CAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGT 33637
|| ||| || || ||| |||||||||||| |||| | ||| | ||||| || || ||
Sbjct 574913 CAGACAGGCAAAGTCGGTGTGCAGACCCTCATCTCGAGAAATGAGCTCGTTGGAGAAGGT 574854
Query 33638 GAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAA 33697
|| || ||||| || || ||||| || ||||| || ||||| || || |||||||| ||
Sbjct 574853 CAGGCCAGGCATGAGACCTCGCTTCTTGAGCCAGAAAATGGAGGCAAAAGATCCGGAGAA 574794
Query 33698 GAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCGCTGTC 33754
||| || || || || ||||||||||| ||||||| ||| ||| | | || |||
Sbjct 574793 GAAAATACCCTCAACGGCAGCAAAGGCGATAAGTCGCTCGCCAAAGGTAGACTCGTCGTC 574734
Query 33755 ATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGC 33814
|||||||| ||||||| ||||||||||| || | || || || || || |||||
Sbjct 574733 GGAGATCCACTTGAGAGCCCAGTCGGCCTTCTTCTTGATGCAGGGAATGGTCTCAATGGC 574674
Query 33815 ATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATA 33874
|| || || || || || || || || | |||||||| || | ||| ||
Sbjct 574673 GTTGAACAGGTAAGTTCGCTCCTTGGGGTCCTTGATGTAAGTATCAATGAGCAGAGAGTA 574614
Query 33875 CATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGT 33934
| || ||||| ||||| || || ||||| ||||||||||| || | ||||| |
Sbjct 574613 GGTCTCGGAATGGATGTTCTCCATCATGATCTGGAATCCGTAGAAGCACTTGGCCTCAGG 574554
Query 33935 AATCTGCACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCATCACTGGC 33994
| ||| || ||| | | || || || | | || || || || || || ||| |||
Sbjct 574553 AGCCTGAACCTCTCCAGAGAACCGCTCAACCAGGTTCTCGTTGACAATACCGTCAGAGGC 574494
Query 33995 TGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTT----AGTTTAT 34050
||||| || |||| || || || ||| | || ||||| | |||| | || |
Sbjct 574493 AGCAAAGAAAGCCAGCACGTGCGAAATGAAAAACTTCTCGTC-GCTGTTGAGCCGGTTCT 574435
Query 34051 TCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTG 34110
||| || ||||| || | ||| | || || | ||||| || || ||||| |
Sbjct 574434 CCCAGTCGCCCATATCCTTGCCGAGATCAATCTCCTCGGCGGTCCAGAAAGAAGCCTCGG 574375
Query 34111 CCTTTTTATACATATTCCAGATGTCATGATATTGGATTGGGAAAATAACAAA 34162
|||| || ||||| | ||| || ||||| || || || ||||| | |||||
Sbjct 574374 CCTTCTTGTACATCTGCCAAATCTCATGGTACTGAATAGGGAAGAGCACAAA 574323
>seq5
Length=2743614
Score = 199 bits (220), Expect = 5e-46
Identities = 631/952 (66%), Gaps = 36/952 (4%)
Strand=Plus/Minus
Query 62943 GCAACAGATGCCAGATTACACACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCA 63002
|| ||||| ||||||||||| || || || || | || | || ||||| || ||||||
Sbjct 1439864 GCCACAGAAGCCAGATTACAAACAGCAACTTCTTCAGGAGACGAGTATTGAATAATCTCA 1439805
Query 63003 GTGCAAAGATTACTAC-ACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACA 63061
|| || | ||| | || | ||||| || || | ||| || || || || ||||||
Sbjct 1439804 GTACACAAATT-CGACGATTTGATCGTACCGAGATTCTGCTGGTTGGATTTCGCGTTACA 1439746
Query 63062 CGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTT 63121
|| ||||| || ||||| ||| || ||||| || ||| | |||||| ||
Sbjct 1439745 GCTGTCTTTATACAGCATGAACGGACCTCCTGTTTCGATTTGACTCGTGAGAATCGCCTT 1439686
Query 63122 CCAGACGACTCGAGCCTTTATTATAGATTTGTATCTCCTTTCTCTT-TCGTATAGAGTAT 63180
| | | |||| || ||| ||| ||||| || | |||| || || | | |
Sbjct 1439685 GAACAGCTCCTGAGCGTTGATTTGAGAATTGTACAGCCCCT-TCTTCTCATACTCATTGT 1439627
Query 63181 ACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCTAGGACATTCATCCGGA-CAC 63239
|||| | ||||| ||||||||||| |||| ||| || ||| | | || || ||
Sbjct 1439626 ACAACCTCTCGAAATCGTCTCCCCAGACATCAGCCAGTCCTGGAGCT-CTTCTGGGGCAG 1439568
Query 63240 ATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGA 63299
| | |||||| | | || | | | ||| ||||||||| | |||||| | ||| |||
Sbjct 1439567 AAAAGCGACCATTTTTCGCCGTTTTCGACTTTTTTCATAAACAAATCAGGCACCCAGAGA 1439508
Query 63300 GCTATA-AATAGATCTCTTGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAG 63358
|| ||| || || || | || ||| | |||||| || ||| ||| | || ||
Sbjct 1439507 GC-ATAGAACAGGTCACGTGCTCTGTTTTCCTCTGCGCCATGATTTTTTCGCAAATTCAG 1439449
Query 63359 GAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTT 63418
|| ||| |||||| | |||||| || ||||| || | || | ||||||| |||||
Sbjct 1439448 AAAATCCAAAATATCCGCATGCCAAGGCTCCAAATACACTGCAAACGCTCCAGGTCGTTT 1439389
Query 63419 GTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAAT 63478
|||||| || ||||| | ||| | ||||| || || | ||||| | ||| |||| ||
Sbjct 1439388 GTTTCCCCCTTGATCAACGTACCGTGCGGTATTGTTGAACACTCTGAGCATGGGAACGAT 1439329
Query 63479 ACCGTTTGATATAC---CATTG-GTACCGGAGAT-ATAGCCTCCACTGGCACGAATATTA 63533
||| ||| | || | ||| | ||| | || | || |||| |||| | || ||
Sbjct 1439328 ACC---TGA-AGACCGTCCTTGAGAACCTGTAATGAGAG-CTCCTTTGGCTCTGATGTTG 1439274
Query 63534 CTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTT-AACGT 63592
||| |||||||| || ||||| |||| || || || || |||||| | |||
Sbjct 1439273 TGAATATGCAGACCTATACCTCCTGCTGTTTTGGAAATCTGAGCACA-CGTTTTGAGCGT 1439215
Query 63593 GTCATAGATGCCTTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTG 63652
||| |||||||| || ||| || | |||| || ||||||||| ||| |
Sbjct 1439214 GTCGTAGATGCCGTCAATGGAGTCTGCTGCCATGGCAACGAGAAAACAG---GACGAAAG 1439158
Query 63653 GTGAC---GAGTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTC 63709
|||| ||| ||| || ||||| || |||||||||||||| || || ||| ||| |
Sbjct 1439157 CTGACCCTGAGGAGTACCTGCATTGAACAAGGTAGGAGAAGCATGAGTGAAC--TTTCTG 1439100
Query 63710 AG----AAAGTAGATTGTACGTCTC-AATAGCTGAGTCTATATCCCATTGATGAATTCCT 63764
|| |||| ||| |||||| || | | || || |||| | || || ||
Sbjct 1439099 AGAGATAAAGCAGA--GTACGTTTCGAGCACCTTGGT-GGTATCGTCTCCGTGGATGGCT 1439043
Query 63765 ACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACAATTTTGTTGTTTATTTTCAAC 63824
| || || ||||| | ||| || ||||||||||| || | | | ||| ||||
Sbjct 1439042 AGTGATACTCGCATGAGCATCTGTTGAGGTCTTTCCACTACTCGTCCCTGGATTCTCAAA 1438983
Query 63825 AAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTC 63876
| ||| ||||||||||| || || || ||||| ||| ||| | | |||||
Sbjct 1438982 AGGTACGATTTTTCCAACGTCTTGAATCCAAAGTAGGAGTAAGTGAGGTCTC 1438931
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 629817450418320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |