Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20sp._20JCM_2030694_20[genbank_20GCA_5F001600515.1_202016-
03-01] 19 sequences; 21,758,297 total letters
Query= NC_003391.1
Length=205719
Score E
Sequences producing significant alignments: (Bits) Value
seq6 205 1e-47
seq5 172 7e-38
>seq6
Length=2655350
Score = 205 bits (226), Expect = 1e-47
Identities = 403/593 (68%), Gaps = 10/593 (2%)
Strand=Plus/Minus
Query 36154 CAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGT 36213
|| ||| || || ||| ||| |||||||| |||| | ||| | |||||||| || ||
Sbjct 574913 CAGACAGGCAAAGTCGGTGTGCAGACCCTCATCTCGAGAAATGAGCTCGTTGGAGAAGGT 574854
Query 36214 GAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAA 36273
|| || ||||| || || ||||| || ||||| || ||||| ||||| ||||| || ||
Sbjct 574853 CAGGCCAGGCATGAGACCTCGCTTCTTGAGCCAGAAAATGGAGGCAAAAGATCCGGAGAA 574794
Query 36274 GAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCACT----GT 36329
|||||| || || || || |||||||| ||||||| ||| ||| | | ||| ||
Sbjct 574793 GAAAATACCCTCAACGGCAGCAAAGGCGATAAGTCGCTCGCCAAAGGTAG-ACTCGTCGT 574735
Query 36330 CATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAG 36389
| |||||||| ||||||| ||||||||||| || | || || || ||||| || |
Sbjct 574734 CGGAGATCCACTTGAGAGCCCAGTCGGCCTTCTTCTTGATGCAGGGAATGGTCTCAATGG 574675
Query 36390 CATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTAT 36449
| || || || || || || || || || | || |||||||| | ||| |
Sbjct 574674 CGTTGAACAGGTAAGTTCGCTCCTTGGGGTCCTTGATGTAAGTATCAATGAGCAGAGAGT 574615
Query 36450 ACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGG 36509
| | || ||||| ||||| || || || || ||||||||||| || | ||||| |
Sbjct 574614 AGGTCTCGGAATGGATGTTCTCCATCATGATCTGGAATCCGTAGAAGCACTTGGCCTCAG 574555
Query 36510 TAATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGG 36569
| ||| || ||| | | || || || | | || || || || || |||||| ||
Sbjct 574554 GAGCCTGAACCTCTCCAGAGAACCGCTCAACCAGGTTCTCGTTGACAATACCGTCAGAGG 574495
Query 36570 CTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTTTGGTGTT----AGTTTA 36625
| ||||| || |||| || || || ||| | || ||| | | |||| | ||
Sbjct 574494 CAGCAAAGAAAGCCAGCACGTGCGAAATGAAAAACTTCTCG-TCGCTGTTGAGCCGGTTC 574436
Query 36626 TTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCT 36685
| ||| || ||||| || | ||| | || || | ||||| || || |||||
Sbjct 574435 TCCCAGTCGCCCATATCCTTGCCGAGATCAATCTCCTCGGCGGTCCAGAAAGAAGCCTCG 574376
Query 36686 GCCTTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAA 36738
||||| || ||||| | ||| || ||||| || ||||| || || | |||||
Sbjct 574375 GCCTTCTTGTACATCTGCCAAATCTCATGGTACTGAATAGGGAAGAGCACAAA 574323
>seq5
Length=2743614
Score = 172 bits (190), Expect = 7e-38
Identities = 624/952 (66%), Gaps = 36/952 (4%)
Strand=Plus/Minus
Query 65736 GCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCA 65795
|| ||||| |||||||||||||| || || || | || | || ||||| || ||||||
Sbjct 1439864 GCCACAGAAGCCAGATTACAAACAGCAACTTCTTCAGGAGACGAGTATTGAATAATCTCA 1439805
Query 65796 GTGCAAAGATTACTAC-ACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACA 65854
|| || | ||| | || | ||||| || || | ||| || || || || ||||||
Sbjct 1439804 GTACACAAATT-CGACGATTTGATCGTACCGAGATTCTGCTGGTTGGATTTCGCGTTACA 1439746
Query 65855 CGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTT 65914
|| ||||| || ||||| ||| || ||||| || ||| | |||||| ||
Sbjct 1439745 GCTGTCTTTATACAGCATGAACGGACCTCCTGTTTCGATTTGACTCGTGAGAATCGCCTT 1439686
Query 65915 CCAGACGACTCGAGCCTTTATTATAGATTTGTAT---CTCTT-TTCTCTTTCGTATAGTG 65970
| | | |||| || ||| ||| ||||| | ||| ||||| | | || ||
Sbjct 1439685 GAACAGCTCCTGAGCGTTGATTTGAGAATTGTACAGCCCCTTCTTCTCATACTCATTGT- 1439627
Query 65971 TATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGA- 66029
|||| | ||||| ||||||||||| |||| ||| ||| ||| | | || ||
Sbjct 1439626 ---ACAACCTCTCGAAATCGTCTCCCCAGACATCAGCCAGTCCTGGAGCT-CTTCTGGGG 1439571
Query 66030 CACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAA 66089
|| | | |||||| | | || | | | ||| ||||||||| | |||||| | |||
Sbjct 1439570 CAGAAAAGCGACCATTTTTCGCCGTTTTCGACTTTTTTCATAAACAAATCAGGCACCCAG 1439511
Query 66090 AGAGCTATA-AATAAATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATC 66148
||||| ||| || | || | | ||| | |||||| || ||| ||| | ||
Sbjct 1439510 AGAGC-ATAGAACAGGTCACGTGCTCTGTTTTCCTCTGCGCCATGATTTTTTCGCAAATT 1439452
Query 66149 GAGGAACGCCATAATATCATAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCG 66208
|| || ||| |||||| |||||| || ||||| || | || | ||||||| ||
Sbjct 1439451 CAGAAAATCCAAAATATCCGCATGCCAAGGCTCCAAATACACTGCAAACGCTCCAGGTCG 1439392
Query 66209 TTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAAT 66268
||||||||| || ||||| | ||| | ||||| || || | ||||| | ||| ||||
Sbjct 1439391 TTTGTTTCCCCCTTGATCAACGTACCGTGCGGTATTGTTGAACACTCTGAGCATGGGAAC 1439332
Query 66269 AATACCATTGGATGTACCATTGGTCCCGGAGAT-ATAGCTTCCACTTGCACGAATATTAC 66327
||||| || || | | || | || | ||| ||| | || | || ||
Sbjct 1439331 GATACCTGAAGACCGTCCTTGAGAACCTGTAATGAGAGC-TCCTTTGGCTCTGATGTTGT 1439273
Query 66328 TAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTT-AACGTA 66386
||| |||||||| || ||||| |||| || || || || |||||| | |||
Sbjct 1439272 GAATATGCAGACCTATACCTCCTGCTGTTTTGGAAATCTGAGCACA-CGTTTTGAGCGTG 1439214
Query 66387 TCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGG 66446
|| |||||||| || || || | |||| || ||||||||| ||| |
Sbjct 1439213 TCGTAGATGCCGTCAATGGAGTCTGCTGCCATGGCAACGAGAAAACAG---GACGAAAGC 1439157
Query 66447 TGAC---GACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCA 66503
|||| || ||| || ||||| || |||||||||||||| || || ||| ||| | |
Sbjct 1439156 TGACCCTGAGGAGTACCTGCATTGAACAAGGTAGGAGAAGCATGAGTGAAC--TTTCTGA 1439099
Query 66504 G----AAAGTAGATTGTACGTCTC-AATAGCTGAGTCTATATCCCATTGATGAATTCCTA 66558
| |||| ||| |||||| || | | || || |||| | || || |||
Sbjct 1439098 GAGATAAAGCAGA--GTACGTTTCGAGCACCTTGGT-GGTATCGTCTCCGTGGATGGCTA 1439042
Query 66559 CTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGT-TGTTTATTTTCAAC 66617
|| || ||||| | ||| || ||||||||||| || | || || | ||| ||||
Sbjct 1439041 GTGATACTCGCATGAGCATCTGTTGAGGTCTTTCCACTA-CTCGTCCCTGGATTCTCAAA 1438983
Query 66618 AAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTC 66669
| ||| ||||||||||| || || || ||||| ||| ||| | | |||||
Sbjct 1438982 AGGTACGATTTTTCCAACGTCTTGAATCCAAAGTAGGAGTAAGTGAGGTCTC 1438931
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 658172643683960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |