Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yarrowia_20sp._20JCM_2030694_20[genbank_20GCA_5F001600515.1_202016- 03-01] 19 sequences; 21,758,297 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq1 86.0 6e-12 >seq1 Length=4845111 Score = 86.0 bits (94), Expect = 6e-12 Identities = 142/200 (71%), Gaps = 4/200 (2%) Strand=Plus/Plus Query 139568 GTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGC-TCGAGTCTTCGAGCTGTTTACC 139626 |||||||| || || ||||| || ||| || || | || | ||||||||||| ||||| Sbjct 2007212 GTAGACTCCTTCTGGATGTTGTAGTCGGACAGAGTTCGTCCA-TCTTCGAGCTGCTTACC 2007270 Query 139627 AGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTG-TT 139685 ||| | || || || ||||| || || || || || || ||||| ||| | || | | Sbjct 2007271 AGCGAAAATGAGTCGCTGCTGGTCCGGGGGAATTCCCTCCTTGTC-CTGAATCTTGGACT 2007329 Query 139686 TTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACG 139745 | | | || | ||||||| || ||| ||||||| ||| | ||||| || || | | Sbjct 2007330 TGACATTGTCAATGGTGTCGGAGGACTCGACCTCAAGGGTAATGGTCTTTCCAGTGAGGG 2007389 Query 139746 TTTTTACGAATATTTGCATA 139765 | || ||||| || |||||| Sbjct 2007390 TCTTCACGAAAATCTGCATA 2007409 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496063882184800