Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20sp._20JCM_2030694_20[genbank_20GCA_5F001600515.1_202016-
03-01] 19 sequences; 21,758,297 total letters
Query= NC_004105.1
Length=209771
Score E
Sequences producing significant alignments: (Bits) Value
seq6 226 4e-54
>seq6
Length=2655350
Score = 226 bits (250), Expect = 4e-54
Identities = 408/593 (69%), Gaps = 10/593 (2%)
Strand=Plus/Minus
Query 42061 CAAACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGT 42120
|| ||| || || ||| ||||||||||||||||| | ||| | |||||||| || ||
Sbjct 574913 CAGACAGGCAAAGTCGGTGTGCAGACCCTCATCTCGAGAAATGAGCTCGTTGGAGAAGGT 574854
Query 42121 GAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGAAAA 42180
|| || ||||| || || ||||| || ||||| || || || ||||| ||||| || ||
Sbjct 574853 CAGGCCAGGCATGAGACCTCGCTTCTTGAGCCAGAAAATGGAGGCAAAAGATCCGGAGAA 574794
Query 42181 GAAGATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCACT----GT 42236
||| || || || || || |||||||| ||||||| ||| ||| || ||| ||
Sbjct 574793 GAAAATACCCTCAACGGCAGCAAAGGCGATAAGTCGCTCGCCA-AAGGTAGACTCGTCGT 574735
Query 42237 CATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGG 42296
| |||||||| ||||||| ||||||||||| || | || || || || || ||||
Sbjct 574734 CGGAGATCCACTTGAGAGCCCAGTCGGCCTTCTTCTTGATGCAGGGAATGGTCTCAATGG 574675
Query 42297 CATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCGATCAAAAGACTAT 42356
| || || || || || || || || || | || ||||| || | ||| |
Sbjct 574674 CGTTGAACAGGTAAGTTCGCTCCTTGGGGTCCTTGATGTAAGTATCAATGAGCAGAGAGT 574615
Query 42357 ACATTTCTGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCCTCGG 42416
| | || ||||| ||||| || || ||||| ||||||||||| || ||||||| |
Sbjct 574614 AGGTCTCGGAATGGATGTTCTCCATCATGATCTGGAATCCGTAGAAGCACTTGGCCTCAG 574555
Query 42417 TAACCTGTACTTCTGTACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTCACTGG 42476
| |||| || ||| | | || || ||| | | || ||||| || || |||||| ||
Sbjct 574554 GAGCCTGAACCTCTCCAGAGAACCGCTCAACCAGGTTCTCGTTGACAATACCGTCAGAGG 574495
Query 42477 CTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCCGGTGTTAA----TTTA 42532
| ||||| || |||| || || || ||| | || |||| || |||| | ||
Sbjct 574494 CAGCAAAGAAAGCCAGCACGTGCGAAATGAAAAACTTCTCGT-CGCTGTTGAGCCGGTTC 574436
Query 42533 TTCCAATCATTGATATCTTTAGATATATCTACTTCTTCTACCGTCCAAAATGATGCTTCT 42592
| ||| || ||||| || | ||| | || || | ||||| || || || ||
Sbjct 574435 TCCCAGTCGCCCATATCCTTGCCGAGATCAATCTCCTCGGCGGTCCAGAAAGAAGCCTCG 574376
Query 42593 GCCTTTTTATACATATTCCAGATATCATGATATTGAATTGGGAAAATAACAAA 42645
||||| || ||||| | ||| || ||||| || ||||| ||||| | |||||
Sbjct 574375 GCCTTCTTGTACATCTGCCAAATCTCATGGTACTGAATAGGGAAGAGCACAAA 574323
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 671139040604440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |