Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20sp._20JCM_2030694_20[genbank_20GCA_5F001600515.1_202016-
03-01] 19 sequences; 21,758,297 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq6 260 2e-64
seq2 125 1e-23
seq5 100 4e-16
>seq6
Length=2655350
Score = 260 bits (288), Expect = 2e-64
Identities = 585/866 (68%), Gaps = 47/866 (5%)
Strand=Plus/Plus
Query 125009 GTATCATGACATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGA 125068
||| ||||| |||||| | |||||||| ||||| |||| || || ||||| | ||| ||
Sbjct 574343 GTACCATGAGATTTGGCAGATGTACAAGAAGGCCGAGGCTTCTTTCTGGACCGCCGAGGA 574402
Query 125069 GGTCGATCTGTCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGA 125128
| | ||||| |||||| || ||| ||||||| || | | | | || |||||
Sbjct 574403 GATTGATCTCGGCAAGGATATGGGCGACTGGGAGAACCGGCTCA---ACAGCGA-CGAGA 574458
Query 125129 -GTTT---ATATCGCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACA 125184
|||| || |||||| | |||| |||||||| | ||| || || || |||||||| |
Sbjct 574459 AGTTTTTCATTTCGCACGTGCTGGCTTTCTTTGCTGCCTCTGACGGTATTGTCAACGAGA 574518
Query 125185 ATCTG-TTGACACGATTCTCTCAAGAGTTGACCATTCCAGAGGTGTCGTGCTTTTACGGA 125243
| ||| |||| || |||||| |||| | ||| |||| |||||| ||||||
Sbjct 574519 ACCTGGTTGAG-CGGTTCTCTGGAGAGGTTCAGGCTCCTGAGGCCAAGTGCTTCTACGGA 574577
Query 125244 TTCCAAATCATGATTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTAC 125303
||||| |||||||| |||||| | || || || | |||||| || ||||| | |||
Sbjct 574578 TTCCAGATCATGATGGAGAACATCCATTCCGAGACCTACTCTCTGCTCATTGATACTTAC 574637
Query 125304 ATTCGCGATCCGCAACGTAAACACAT-GCTCTTTAACGCAATCGACACGGTGCCGTCTAT 125362
| || | || ||| | || | || || ||||| || || || | || | ||
Sbjct 574638 A-TCAAGGACCCCAAGGAGCGAACTTACCTGTTCAACGCCATTGAGACCATTCCCTGCAT 574696
Query 125363 ACGTAAAAAGGCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGA 125422
|| ||||| | |||| | ||||||| |||||| ||||| | | | |||
Sbjct 574697 CAAGAAGAAGGCCGACTGGGCTCTCAAGTGGATCTCCGACGACGAGTCTACCTTTGGCGA 574756
Query 125423 CAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCAT 125482
|||| | || || || ||||| ||||| || ||||| || || |||||| ||||
Sbjct 574757 GCGACTTATCGCCTTTGCTGCCGTTGAGGGTATTTTCTTCTCCGGATCTTTTGCCTCCAT 574816
Query 125483 CTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATC 125542
|| |||||||||||||| || |||||||| || ||||| | |||||| | || ||
Sbjct 574817 TTTCTGGCTCAAGAAGCGAGGTCTCATGCCTGGCCTGACCTTCTCCAACGAGCTCATTTC 574876
Query 125543 TCGAGACGAGGGCCTACACTGTGACTTTGCCATTCTACTGTT-TCGCAACTATCTGCGTC 125601
|||||| ||||| || ||| ||||||||| ||| || || || || ||
Sbjct 574877 TCGAGATGAGGGTCTGCACACCGACTTTGCCTGTCTGCTCTTCTCTCACCT--------- 574927
Query 125602 CCGAGTGCAGATCCAGCGATGAAAAGGTC---ATCAACATTGTAACCGATGCCGTGAGGA 125658
|||| | || || | | | | ||| | |||||| ||| || || | |
Sbjct 574928 -CGAGAACCGACCCTCCAAGAAGATTGTCGAGGACGTCATTGT---CGAGGCTGTTGGCA 574983
Query 125659 TAGAACAAGAGTTTCTAACCGA----ATCCCTACCGGTCAGCATGATTGGCATGAACTGC 125714
| || || ||||| || || || ||||| |||| || | || |||||| |
Sbjct 574984 TTGAGCAGGAGTTCCTTACTGATGCTCTCCCTTGTGGTC----TGCTCGGTATGAACGCC 575039
Query 125715 AAGCTAATGTGCGAGTACATAGAGTTTGTGGCAGATCGTCTACTGTACGAGTTG--ATTG 125772
||||| ||| | ||||||| ||||||||||| || ||||| || |||| |||
Sbjct 575040 AAGCTCATGCGACAGTACATTGAGTTTGTGGCCGACCGTCTGCT-----TGTTGCTCTTG 575094
Query 125773 G---CCGCAAGATTTACAACGCCAAGAATCCCTTTGATTTCATGACCAGCATATCACTAG 125829
| || |||| | |||||| ||| || |||||||| |||||| | ||| || || |
Sbjct 575095 GAAACCCCAAGGTCTACAACTCCACCAACCCCTTTGACTTCATGGAGAACATTTCTCTGG 575154
Query 125830 AGGGTAAGACCAACTTTTTCGAGAAG 125855
|| ||||||||||| |||||||||
Sbjct 575155 CTGGAAAGACCAACTTCTTCGAGAAG 575180
>seq2
Length=4150472
Score = 125 bits (138), Expect = 1e-23
Identities = 376/571 (66%), Gaps = 12/571 (2%)
Strand=Plus/Plus
Query 96807 ACAAACGGCAACGCCAGTGGCCTAGTGCCAATGCTCAGAATGTACAATG-CAATGTCACG 96865
|| ||||| | | ||| || | ||||| |||||| || | ||||| || || | ||
Sbjct 324866 ACCAACGGTACCTCCAACGGTATCGTGCCCATGCTCCGAGTCTACAACAACACTGCC-CG 324924
Query 96866 ATACGTTACACAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTG 96925
||||||| ||||| || || || || || || || | ||| | ||| | || |||||
Sbjct 324925 ATACGTTGACCAGGGTGGTAACAAGCGACCCGGAGCCTTTGCCATGTACCTTGAGCCTTG 324984
Query 96926 GCACGCGGACGTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACG 96985
||||| ||| | || || || |||| |||| || ||| || || ||| ||
Sbjct 324985 GCACGACGACATCTTCGAGTTCTGCGAGCTGCGAAAGAACCACGGAAAGGAGGAGATCCG 325044
Query 96986 AGCCAGGGACTTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAACGA 97045
|||| | ||| |||| || || ||| | || || |||||||| |||| ||| | |
Sbjct 325045 AGCCCGAGACCTGTTCCTGGCCCTGTGGATTCCCGACCTGTTCATGGAGCGAGTCGAGCA 325104
Query 97046 CGGTGGCTACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGGGG 97105
||| | |||| ||| ||||||||| || || |||||||| ||| || ||
Sbjct 325105 GAACGGCGAGTGGACCCTCATGTGCCCCAACGAGTGCCCCGGTCTTGACGACGTCTACGG 325164
Query 97106 CGAAGAGTTTGAGGCCAAGTACACGGCCTACGAGCAAGAGGGCCGATACGTGAGACGAGT 97165
|| ||||| || |||| | ||||||| |||||| ||| | |||||
Sbjct 325165 TGACGAGTTCAAGAAGCTGTACGAGCAGTACGAGCGAGAGGGACGAGGCC---GACGAAC 325221
Query 97166 CGATGCACG---AGAA-CTGTGGAAGGCCATCGT-GACGGCTCAGGTAGAGACTGGAACT 97220
| || | || |||| |||||| | ||| | ||| || ||| ||| | ||||
Sbjct 325222 C-ATCCCCGCCCAGAAGCTGTGGTACCACATTCTCGACTGC-CAGACCGAGTCCGGAAAC 325279
Query 97221 CCGTACATTCTCTACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCACC 97280
|| | ||| ||||||||||| || || || || |||||| || |||| |||
Sbjct 325280 CCCTTCATGCTCTACAAGGACTCCTGCAACCGAAAGTCCAACCAGAAGAACCTGGGAACC 325339
Query 97281 ATCAAGGGCTCCAATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAGACGGCA 97340
|||||| ||||| ||||| || ||||| |||||| | ||||| || ||| ||
Sbjct 325340 ATCAAGTCTTCCAACCTGTGTTGCGAGATTGTCGAGTACTCTTCTCCCGATGAGGTTGCC 325399
Query 97341 GTTTGCGTTCTGGCATCGGTCAATCTGCCCA 97371
|| ||| ||||| || | ||||||||
Sbjct 325400 GTCTGCAACCTGGCCTCCATTGCTCTGCCCA 325430
>seq5
Length=2743614
Score = 100 bits (110), Expect = 4e-16
Identities = 149/208 (72%), Gaps = 10/208 (5%)
Strand=Plus/Plus
Query 96831 GTGCCAATGCTCAGAATGTACAATGCAATGTC--ACGATACGTTACACAGGGCGGCAATA 96888
|| || ||||||||| ||| ||| |||| | ||| |||||| || || || || |
Sbjct 1439332 GTTCCCATGCTCAGAGTGTTCAA--CAATACCGCACGGTACGTTGATCAAGGGGGAAACA 1439389
Query 96889 AACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGGCACGCGGACGTTTTTGACTTTA 96948
|||| || || || | || || || ||||| |||||||| ||||| |||| || |||
Sbjct 1439390 AACGACCTGGAGCGTTTGCAGTGTATTTGGAGCCTTGGCATGCGGATATTTTGGATTTTC 1439449
Query 96949 TCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCAC---GAGCCAGGGACTTGTTTTATG 97005
| | |||| ||||| |||| | ||||| | |||| | ||| |||| ||||
Sbjct 1439450 TGAATTTGCGAAAAAATCATGGC---GCAGAGGAAAACAGAGCACGTGACCTGTTCTATG 1439506
Query 97006 CACTCTGGGTGCCAGATTTGTTCATGAA 97033
| ||||||||||| |||||||| |||||
Sbjct 1439507 CTCTCTGGGTGCCTGATTTGTTTATGAA 1439534
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 741059023998440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |