Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yarrowia_20sp._20JCM_2030694_20[genbank_20GCA_5F001600515.1_202016- 03-01] 19 sequences; 21,758,297 total letters Query= NC_005832.1 Length=106332 Score E Sequences producing significant alignments: (Bits) Value seq5 84.2 1e-11 >seq5 Length=2743614 Score = 84.2 bits (92), Expect = 1e-11 Identities = 134/186 (72%), Gaps = 10/186 (5%) Strand=Plus/Plus Query 44367 TCGTCAAGGTGAGGCTGAGGACCCCCAGGCACCCAGAGATGGGCGACAAGTTTGCGTCGT 44426 |||||||||| || || | ||| ||| | ||| |||| || ||||||||||| || Sbjct 360082 TCGTCAAGGTAAGAATGCGAACCACCAAGATCCCCCAGATTGGAGACAAGTTTGCATCTC 360141 Query 44427 -TCACGGCGCAAAAGGGGACATGCGGAGC--CGTCCTGACCCAGGAGGACATGCCCTT-- 44481 |||||| || ||||| || || | ||| ||| | ||||||||||| || Sbjct 360142 GTCACGGA-CAGAAGGGAACCATTGGTGTTACGTTTAGACAC--GAGGACATGCCGTTTT 360198 Query 44482 CGACAAAAACGGGGTGGTGCCCGACCTCATCATCAACCCCCACGCCTTTCCCTCCAGGAT 44541 || | | || ||||||||||| |||||||||||||||||||| |||| || | || Sbjct 360199 CGGCCGAG--GGAGTGGTGCCCGATATCATCATCAACCCCCACGCCATTCCTTCGCGTAT 360256 Query 44542 GACCGT 44547 |||||| Sbjct 360257 GACCGT 360262 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 340137521236887