Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20sp._20JCM_2030694_20[genbank_20GCA_5F001600515.1_202016-
03-01] 19 sequences; 21,758,297 total letters
Query= NC_005832.1
Length=106332
Score E
Sequences producing significant alignments: (Bits) Value
seq5 84.2 1e-11
>seq5
Length=2743614
Score = 84.2 bits (92), Expect = 1e-11
Identities = 134/186 (72%), Gaps = 10/186 (5%)
Strand=Plus/Plus
Query 44367 TCGTCAAGGTGAGGCTGAGGACCCCCAGGCACCCAGAGATGGGCGACAAGTTTGCGTCGT 44426
|||||||||| || || | ||| ||| | ||| |||| || ||||||||||| ||
Sbjct 360082 TCGTCAAGGTAAGAATGCGAACCACCAAGATCCCCCAGATTGGAGACAAGTTTGCATCTC 360141
Query 44427 -TCACGGCGCAAAAGGGGACATGCGGAGC--CGTCCTGACCCAGGAGGACATGCCCTT-- 44481
|||||| || ||||| || || | ||| ||| | ||||||||||| ||
Sbjct 360142 GTCACGGA-CAGAAGGGAACCATTGGTGTTACGTTTAGACAC--GAGGACATGCCGTTTT 360198
Query 44482 CGACAAAAACGGGGTGGTGCCCGACCTCATCATCAACCCCCACGCCTTTCCCTCCAGGAT 44541
|| | | || ||||||||||| |||||||||||||||||||| |||| || | ||
Sbjct 360199 CGGCCGAG--GGAGTGGTGCCCGATATCATCATCAACCCCCACGCCATTCCTTCGCGTAT 360256
Query 44542 GACCGT 44547
||||||
Sbjct 360257 GACCGT 360262
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 340137521236887
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |