Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yarrowia_20sp._20JCM_2030694_20[genbank_20GCA_5F001600515.1_202016- 03-01] 19 sequences; 21,758,297 total letters Query= NC_005946.1 Length=105903 Score E Sequences producing significant alignments: (Bits) Value seq5 89.7 3e-13 >seq5 Length=2743614 Score = 89.7 bits (98), Expect = 3e-13 Identities = 133/184 (72%), Gaps = 6/184 (3%) Strand=Plus/Minus Query 71416 ACGGTCATCCTGGAGGGAAAGGCGTGGGGGTTGATGATGAGGTCGGGCACCACCCCGTCC 71475 |||||||| | || |||| |||||||||||||||||||| ||||||||||| || || Sbjct 360262 ACGGTCATACGCGAAGGAATGGCGTGGGGGTTGATGATGATATCGGGCACCACTCCCTCG 360203 Query 71476 TTGTCGAAG--GGCATGTCCTCCTGGGTCAGGACAGCTCCGCATGTCCCCTTTTGCGCCG 71533 | |||| ||||||||||| || | | | | || || ||||| || ||| Sbjct 360202 --GCCGAAAACGGCATGTCCTCGTGTCTAAACGTAACACCAATGGTTCCCTTCTG-TCCG 360146 Query 71534 TGA-ATGACGCAAACTTGTCGCCCATCTCTGGGTGCCTGGGGGTCCTCAGCCTCACCTTG 71592 ||| || ||||||||||| || |||| ||| | ||| ||| | || || |||||| Sbjct 360145 TGACGAGATGCAAACTTGTCTCCAATCTGGGGGATCTTGGTGGTTCGCATTCTTACCTTG 360086 Query 71593 ACGA 71596 |||| Sbjct 360085 ACGA 360082 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 338764721554776