Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20sp._20JCM_2030694_20[genbank_20GCA_5F001600515.1_202016-
03-01] 19 sequences; 21,758,297 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq2 163 4e-36
seq4 120 5e-23
>seq2
Length=4150472
Score = 163 bits (180), Expect = 4e-36
Identities = 208/284 (73%), Gaps = 2/284 (1%)
Strand=Plus/Plus
Query 16432 CGCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490
||||||||| || || | ||| | | ||||||||||| || |||||||||||||| ||||
Sbjct 1314982 CGCTAAGCGACACCGAAAGATTT-TGCGAGATAACATTCAGGGAATCACCAAGCCCGCTA 1315040
Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGA 16550
|||| ||||| || || || ||||| |||||||| | || | | |||| || ||||
Sbjct 1315041 TCCGACGTCTTGCGCGACGAGGTGGTGTCAAGCGAATTTCCGCCCAGATCTACGAGGAGA 1315100
Query 16551 TTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCG 16610
|| | ||| ||||| ||||||| || |||| || | ||||| || || ||||
Sbjct 1315101 CCCGAAACGTTCTGAAGTCCTTCCTCGAGTCCGTCATTCGAGATGCCGTCACTTACACCG 1315160
Query 16611 AGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAG 16670
||||||| || || ||||||||||| || | ||| | ||||| || | || || || |
Sbjct 1315161 AGCACGCCAAGCGAAAGACTGTCACTTCTCTCGATGTTGTCTACGCCCTCAAGCGACAGG 1315220
Query 16671 GCCGTAAGATTTATGGTTTTGGAAGTTAATCTTCTAATCAAACT 16714
|||| | |||| ||||| || ||||| || || || ||||
Sbjct 1315221 GCCGAACCCTTTACGGTTTCGGTGGTTAAGCTGCTTGTCTAACT 1315264
>seq4
Length=2864709
Score = 120 bits (132), Expect = 5e-23
Identities = 190/270 (70%), Gaps = 2/270 (1%)
Strand=Plus/Minus
Query 16432 CGCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490
||||||||| || || | ||| |||||||||||||||||| || ||||||||||| || |
Sbjct 154747 CGCTAAGCGACACCGAAAGAT-TCTTCGAGATAACATCCAGGGTATCACCAAGCCCGCCA 154689
Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGA 16550
| || ||||| || || || || || |||||||| | || | | | || || ||||
Sbjct 154688 TTCGACGTCTTGCACGACGAGGAGGTGTCAAGCGAATTTCCGCCCAGATTTACGAGGAGA 154629
Query 16551 TTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCG 16610
|| | || | ||| ||||| || | || || | || || | ||| || |
Sbjct 154628 CCCGAAACGTGCTCAAGTCGTTCCTGGAGTCTGTCATTCGAGACGCCGTGACCTACACTG 154569
Query 16611 AGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAG 16670
||||||| || || ||||| |||||||| |||| | ||||| || | || || || |
Sbjct 154568 AGCACGCCAAGCGAAAGACCGTCACCTCTCTGGACGTGGTCTACGCCCTCAAGCGACAGG 154509
Query 16671 GCCGTAAGATTTATGGTTTTGGAAGTTAAT 16700
|||| | | || ||||| ||| ||||||
Sbjct 154508 GCCGAACCCTCTACGGTTTCGGAGGTTAAT 154479
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79075182628167
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |