Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20sp._20JCM_2030694_20[genbank_20GCA_5F001600515.1_202016-
03-01] 19 sequences; 21,758,297 total letters
Query= NC_006966.1
Length=166259
Score E
Sequences producing significant alignments: (Bits) Value
seq6 89.7 5e-13
>seq6
Length=2655350
Score = 89.7 bits (98), Expect = 5e-13
Identities = 169/249 (68%), Gaps = 0/249 (0%)
Strand=Plus/Minus
Query 21472 CAAACATGCAAAATCACAATGCAAACCTTCATCCCTACTTATTAATTCATTAGAAAATGT 21531
|| ||| ||||| || |||| ||| ||||| | | || | || || || || ||
Sbjct 574913 CAGACAGGCAAAGTCGGTGTGCAGACCCTCATCTCGAGAAATGAGCTCGTTGGAGAAGGT 574854
Query 21532 TAAACCGGGCATTAATCCTCTCTTTTTTAACCAAAATATTGACGCAAATGCTCCTGAAAA 21591
| || ||||| | |||| ||| || | ||| || || || ||||| | ||| || ||
Sbjct 574853 CAGGCCAGGCATGAGACCTCGCTTCTTGAGCCAGAAAATGGAGGCAAAAGATCCGGAGAA 574794
Query 21592 GAAAATGCCCTCAACGGCAGCAAATGCAACTAATCGTTCACCGTATGTAGATTCTTTATC 21651
|||||| ||||||||||||||||| || | | ||| || || | ||||| || | ||
Sbjct 574793 GAAAATACCCTCAACGGCAGCAAAGGCGATAAGTCGCTCGCCAAAGGTAGACTCGTCGTC 574734
Query 21652 CAATATCCATTTTTCTGCCCATTTTGCCTTTTCTTTAATACAATCAATTGTATCAATAGC 21711
| ||||| || ||||| | ||||| | || || || ||| || ||||| ||
Sbjct 574733 GGAGATCCACTTGAGAGCCCAGTCGGCCTTCTTCTTGATGCAGGGAATGGTCTCAATGGC 574674
Query 21712 TTTTAAAAG 21720
|| || ||
Sbjct 574673 GTTGAACAG 574665
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 531900673673560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |