Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20sp._20JCM_2030694_20[genbank_20GCA_5F001600515.1_202016-
03-01] 19 sequences; 21,758,297 total letters
Query= NC_006998.1
Length=194711
Score E
Sequences producing significant alignments: (Bits) Value
seq6 219 5e-52
seq5 196 6e-45
>seq6
Length=2655350
Score = 219 bits (242), Expect = 5e-52
Identities = 405/592 (68%), Gaps = 8/592 (1%)
Strand=Plus/Minus
Query 33300 CAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGT 33359
|| ||| || || ||| |||||||||||| |||| | ||| || |||||||| || ||
Sbjct 574913 CAGACAGGCAAAGTCGGTGTGCAGACCCTCATCTCGAGAAATGAGCTCGTTGGAGAAGGT 574854
Query 33360 GAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAA 33419
|| || ||||| || || ||||| || ||||| || ||||| || || ||||| || ||
Sbjct 574853 CAGGCCAGGCATGAGACCTCGCTTCTTGAGCCAGAAAATGGAGGCAAAAGATCCGGAGAA 574794
Query 33420 GAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCGCTGTC 33476
||| || || || || ||||||||||| ||||||| ||| ||| | | || |||
Sbjct 574793 GAAAATACCCTCAACGGCAGCAAAGGCGATAAGTCGCTCGCCAAAGGTAGACTCGTCGTC 574734
Query 33477 ATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGC 33536
|||||||| ||||||| ||||||||||| || | || || || || || |||||
Sbjct 574733 GGAGATCCACTTGAGAGCCCAGTCGGCCTTCTTCTTGATGCAGGGAATGGTCTCAATGGC 574674
Query 33537 ATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATA 33596
|| || || || || || || || || | |||||||| || | ||| ||
Sbjct 574673 GTTGAACAGGTAAGTTCGCTCCTTGGGGTCCTTGATGTAAGTATCAATGAGCAGAGAGTA 574614
Query 33597 CATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGT 33656
| || ||||| ||||| || || ||||| ||||||||||| || | ||||| |
Sbjct 574613 GGTCTCGGAATGGATGTTCTCCATCATGATCTGGAATCCGTAGAAGCACTTGGCCTCAGG 574554
Query 33657 AATCTGTACTTCTGTACAAAATCGTTCCGCCAAATTTTCATTCACTATTCCGTCACTGGC 33716
| ||| || ||| | | || || || ||| || || || || || |||||| |||
Sbjct 574553 AGCCTGAACCTCTCCAGAGAACCGCTCAACCAGGTTCTCGTTGACAATACCGTCAGAGGC 574494
Query 33717 TGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTT----AGTTTAT 33772
||||| || |||| || || || ||| | || ||||| | |||| | || |
Sbjct 574493 AGCAAAGAAAGCCAGCACGTGCGAAATGAAAAACTTCTCGTC-GCTGTTGAGCCGGTTCT 574435
Query 33773 TCCAATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTG 33832
||| || ||||| || | ||| | || || | ||||| || || ||||| |
Sbjct 574434 CCCAGTCGCCCATATCCTTGCCGAGATCAATCTCCTCGGCGGTCCAGAAAGAAGCCTCGG 574375
Query 33833 CCTTTTTATACATGTTCCAGATGTCATAATATTGGATTGGGAAAATAACAAA 33884
|||| || ||||| | ||| || |||| || || || ||||| | |||||
Sbjct 574374 CCTTCTTGTACATCTGCCAAATCTCATGGTACTGAATAGGGAAGAGCACAAA 574323
>seq5
Length=2743614
Score = 196 bits (216), Expect = 6e-45
Identities = 634/956 (66%), Gaps = 44/956 (5%)
Strand=Plus/Minus
Query 62892 GCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCA 62951
|| ||||| |||||||||||||| || || || | || | || ||||| || ||||||
Sbjct 1439864 GCCACAGAAGCCAGATTACAAACAGCAACTTCTTCAGGAGACGAGTATTGAATAATCTCA 1439805
Query 62952 GTGCAAAGATTACTAC-ACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACA 63010
|| || | ||| | || | ||||| || || | ||| || || || || ||||||
Sbjct 1439804 GTACACAAATT-CGACGATTTGATCGTACCGAGATTCTGCTGGTTGGATTTCGCGTTACA 1439746
Query 63011 CGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTT 63070
|| ||||| || ||||| ||| || ||||| || ||| | |||||| ||
Sbjct 1439745 GCTGTCTTTATACAGCATGAACGGACCTCCTGTTTCGATTTGACTCGTGAGAATCGCCTT 1439686
Query 63071 CCAGACGACTCGAGCCTTTATTATAGATTTGTAT--CTCCTT--TCTCTTTCGTATAGTG 63126
| | | |||| || ||| ||| ||||| | |||| |||| | | || ||
Sbjct 1439685 GAACAGCTCCTGAGCGTTGATTTGAGAATTGTACAGCCCCTTCTTCTCATACTCATTGT- 1439627
Query 63127 TATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGA- 63185
|||| | ||||| ||||||||||| |||| ||| ||| ||| | | || ||
Sbjct 1439626 ---ACAACCTCTCGAAATCGTCTCCCCAGACATCAGCCAGTCCTGGAGCT-CTTCTGGGG 1439571
Query 63186 CACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAA 63245
|| | | |||||| | | || | | | ||| ||||||||| | |||||| | |||
Sbjct 1439570 CAGAAAAGCGACCATTTTTCGCCGTTTTCGACTTTTTTCATAAACAAATCAGGCACCCAG 1439511
Query 63246 AGAGCTATA-AATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATC 63304
||||| ||| || || || | | ||| | |||||| || ||| ||| | ||
Sbjct 1439510 AGAGC-ATAGAACAGGTCACGTGCTCTGTTTTCCTCTGCGCCATGATTTTTTCGCAAATT 1439452
Query 63305 GAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCG 63364
|| || ||| |||||| | |||||| || ||||| || | || | ||||||| ||
Sbjct 1439451 CAGAAAATCCAAAATATCCGCATGCCAAGGCTCCAAATACACTGCAAACGCTCCAGGTCG 1439392
Query 63365 TTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAAT 63424
||||||||| || ||||| | ||| | ||||| || || | ||||| | ||| ||||
Sbjct 1439391 TTTGTTTCCCCCTTGATCAACGTACCGTGCGGTATTGTTGAACACTCTGAGCATGGGAAC 1439332
Query 63425 AATACCGTTTGATATAC---CATTG-GTACCGGAGAT-ATAGCTTCCACTGGCACGAATA 63479
||||| ||| | || | ||| | ||| | || | ||| ||| |||| | ||
Sbjct 1439331 GATACC---TGA-AGACCGTCCTTGAGAACCTGTAATGAGAGC-TCCTTTGGCTCTGATG 1439277
Query 63480 TTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTT-AA 63538
|| ||| |||||||| || ||||| |||| || || || || |||||| |
Sbjct 1439276 TTGTGAATATGCAGACCTATACCTCCTGCTGTTTTGGAAATCTGAGCACA-CGTTTTGAG 1439218
Query 63539 CGTGTCATAGATACCCTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACAT 63598
|||||| ||||| || || ||| || | |||| || ||||||||| |||
Sbjct 1439217 CGTGTCGTAGATGCCGTCAATGGAGTCTGCTGCCATGGCAACGAGAAAACAG---GACGA 1439161
Query 63599 TTGGTGAC---GACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTT 63655
| |||| || ||| || ||||| || |||||||||||||| || || ||| |||
Sbjct 1439160 AAGCTGACCCTGAGGAGTACCTGCATTGAACAAGGTAGGAGAAGCATGAGTGAAC--TTT 1439103
Query 63656 TTCAG----AAAGTAGATTGTACGTCTC-AATAGCTGAGTCTATATCCCATTGATGAATT 63710
| || |||| ||| |||||| || | | || || |||| | || ||
Sbjct 1439102 CTGAGAGATAAAGCAGA--GTACGTTTCGAGCACCTTGGT-GGTATCGTCTCCGTGGATG 1439046
Query 63711 CCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGT-TGTTTATTTT 63769
||| || || ||||| | ||| || ||||||||||| || | || || | ||| |
Sbjct 1439045 GCTAGTGATACTCGCATGAGCATCTGTTGAGGTCTTTCCACTA-CTCGTCCCTGGATTCT 1438987
Query 63770 CAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTC 63825
||| | ||| ||||||||||| || || || ||||| ||| ||| | | |||||
Sbjct 1438986 CAAAAGGTACGATTTTTCCAACGTCTTGAATCCAAAGTAGGAGTAAGTGAGGTCTC 1438931
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 622947052050040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |