Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20sp._20JCM_2030694_20[genbank_20GCA_5F001600515.1_202016-
03-01] 19 sequences; 21,758,297 total letters
Query= NC_007151.1
Length=149622
Score E
Sequences producing significant alignments: (Bits) Value
seq1 104 2e-17
>seq1
Length=4845111
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828
||||| | || || || || | |||||||| | || ||| | || | || || |
Sbjct 2007408 ATGCAGATTTTCGTGAAGACCCTCACTGGAAAGACCATTACCCTTGAGGTCGAGTCCTCC 2007349
Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888
|||||||| || | ||||| |||||| ||||| || || || || || || ||
Sbjct 2007348 GACACCATTGACAATGTCAAGTCCAAGATTCAGGACAAGGAGGGAATTCCCCCGGACCAG 2007289
Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948
|| ||||||||| || || || || |||||||||| ||| | |||||| |||
Sbjct 2007288 CAGCGACTCATTTTCGCTGGTAAGCAGCTCGAAGATGGACGAACTCTGTCCGACTACAAC 2007229
Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995
|| || || || |||||| ||||||||||||| ||||| |||| ||
Sbjct 2007228 ATCCAGAAGGAGTCTACTCTCCATCTGGTCCTTCGACTTCGAGGTGG 2007182
Score = 82.4 bits (90), Expect = 7e-11
Identities = 119/168 (71%), Gaps = 0/168 (0%)
Strand=Plus/Minus
Query 26828 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCA 26887
||| || ||||| | ||||| |||||| ||||| || || || || || || ||
Sbjct 2007805 CGATACTATCGACAACGTCAAGTCCAAGATTCAGGACAAGGAGGGAATCCCCCCGGACCA 2007746
Query 26888 ACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAA 26947
|| ||||||| | || || || || || || |||| ||| | || |||||| ||
Sbjct 2007745 GCAGCGACTCATCTTCGCTGGAAAGCAGCTTGAGGATGGCCGAACCCTCTCCGACTACAA 2007686
Query 26948 CATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995
|||||| || || || ||| ||||||||||||| |||| |||| ||
Sbjct 2007685 CATTCAGAAGGAGTCCACTCTCCATCTGGTCCTCCGACTCCGAGGTGG 2007638
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 478662286317680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |