Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yarrowia_20sp._20JCM_2030694_20[genbank_20GCA_5F001600515.1_202016- 03-01] 19 sequences; 21,758,297 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq5 105 4e-18 >seq5 Length=2743614 Score = 105 bits (116), Expect = 4e-18 Identities = 204/301 (68%), Gaps = 0/301 (0%) Strand=Plus/Plus Query 6193 CGGACGCGTTCTACCGCTACAAAATGCCGCGCATCTGCGCCAAGGTCGAGGGTAAGGGAA 6252 ||||| | |||||||| ||||| ||||| |||| | ||||| | |||||| || | Sbjct 1068398 CGGACCCTTTCTACCGGTACAAGATGCCTGCCATCACCTCCAAGATTGAGGGTCGAGGTA 1068457 Query 6253 ACGGTATTAAAACCGTCATTGTCAACATGCCTGAAGTCGCTAAGGCGCTCGGACGCCCTG 6312 ||||||| || |||| | | ||||| |||| || ||| ||| ||| | || Sbjct 1068458 ACGGTATCAAGACCGCCGTGATCAACGGCTCTGATGTTGCTCGGGCTCTCAACAGACCCC 1068517 Query 6313 CCACCTACCCGACGAAATATTTCGGGTGCGAACTTGGCGCTCAGACGCAGTTTGATCACA 6372 || | ||| | || || || || ||| ||||| || ||||| ||| || | Sbjct 1068518 CCTCGTACGTCATCAAGTACTTTGGAATCGAGCTTGGAGCCCAGACCCAGATTTCCGAGG 1068577 Query 6373 AAAACGAGCGCTTCATCGTTAACGGATCGCATAACTCTGCCAAGCTGCAGGACTTACTTG 6432 | || || || | | | || ||||| |||| ||||||| |||||||||| || | Sbjct 1068578 ACAAGGACCGGTACCTTGTCAACGGTCAGCATGACTCTGCTTCTCTGCAGGACTCTCTGG 1068637 Query 6433 ACGGCTTTATTCGCAAGTTTGTGCTGTGTCGGGAATGCGATAACCCGGAGACCGAGCTTA 6492 ||||||| || | |||||||| ||| || ||| | ||||| ||||||||||| | Sbjct 1068638 ACGGCTTCATCAACCGTTTTGTGCTCTGTGAGGCCTGCAAGAACCCCGAGACCGAGCTCA 1068697 Query 6493 T 6493 | Sbjct 1068698 T 1068698 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334947122438789