Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20sp._20JCM_2030694_20[genbank_20GCA_5F001600515.1_202016-
03-01] 19 sequences; 21,758,297 total letters
Query= NC_008291.1
Length=198050
Score E
Sequences producing significant alignments: (Bits) Value
seq6 214 2e-50
seq5 199 5e-46
>seq6
Length=2655350
Score = 214 bits (236), Expect = 2e-50
Identities = 404/592 (68%), Gaps = 8/592 (1%)
Strand=Plus/Minus
Query 32657 CAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGT 32716
|| ||| || || ||| ||| |||||||| |||| | ||| | |||||||| || ||
Sbjct 574913 CAGACAGGCAAAGTCGGTGTGCAGACCCTCATCTCGAGAAATGAGCTCGTTGGAGAAGGT 574854
Query 32717 GAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAA 32776
|| || ||||| || || ||||| || ||||| || ||||| ||||| ||||| || ||
Sbjct 574853 CAGGCCAGGCATGAGACCTCGCTTCTTGAGCCAGAAAATGGAGGCAAAAGATCCGGAGAA 574794
Query 32777 GAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGG---CGCTGTC 32833
|||||| || || || || |||||||| ||||||| ||| ||| | | || |||
Sbjct 574793 GAAAATACCCTCAACGGCAGCAAAGGCGATAAGTCGCTCGCCAAAGGTAGACTCGTCGTC 574734
Query 32834 ATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGC 32893
|||||||| ||||||| ||||||||||| || | || || || ||||| || ||
Sbjct 574733 GGAGATCCACTTGAGAGCCCAGTCGGCCTTCTTCTTGATGCAGGGAATGGTCTCAATGGC 574674
Query 32894 ATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATA 32953
|| || || || || || || || || | || |||||||| | ||| ||
Sbjct 574673 GTTGAACAGGTAAGTTCGCTCCTTGGGGTCCTTGATGTAAGTATCAATGAGCAGAGAGTA 574614
Query 32954 CATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAGCATCTAGCCTCGGT 33013
| || ||||| ||||| || || || || |||||||||||||| | ||||| |
Sbjct 574613 GGTCTCGGAATGGATGTTCTCCATCATGATCTGGAATCCGTAGAAGCACTTGGCCTCAGG 574554
Query 33014 AATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGC 33073
| ||| || ||| | | || || || | | || || || || || |||||| |||
Sbjct 574553 AGCCTGAACCTCTCCAGAGAACCGCTCAACCAGGTTCTCGTTGACAATACCGTCAGAGGC 574494
Query 33074 TGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTT----AGTTTAT 33129
||||| || |||| || || || ||| | || ||||| | |||| | || |
Sbjct 574493 AGCAAAGAAAGCCAGCACGTGCGAAATGAAAAACTTCTCGTC-GCTGTTGAGCCGGTTCT 574435
Query 33130 TCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTG 33189
||| || ||||| || | ||| | || || | ||||| || || ||||| |
Sbjct 574434 CCCAGTCGCCCATATCCTTGCCGAGATCAATCTCCTCGGCGGTCCAGAAAGAAGCCTCGG 574375
Query 33190 CCTTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAA 33241
|||| || ||||| | ||| || ||||| || ||||| || || | |||||
Sbjct 574374 CCTTCTTGTACATCTGCCAAATCTCATGGTACTGAATAGGGAAGAGCACAAA 574323
>seq5
Length=2743614
Score = 199 bits (220), Expect = 5e-46
Identities = 630/952 (66%), Gaps = 36/952 (4%)
Strand=Plus/Minus
Query 62747 GCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCA 62806
|| ||||| |||||||||||||| || || || | || | || ||||| || ||||||
Sbjct 1439864 GCCACAGAAGCCAGATTACAAACAGCAACTTCTTCAGGAGACGAGTATTGAATAATCTCA 1439805
Query 62807 GTGCAAAGATTACTAC-ACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACA 62865
|| || | ||| | || | ||||| || || | ||| || || || || ||||||
Sbjct 1439804 GTACACAAATT-CGACGATTTGATCGTACCGAGATTCTGCTGGTTGGATTTCGCGTTACA 1439746
Query 62866 CGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTT 62925
|| ||||| || ||||| ||| || ||||| || ||| | |||||| ||
Sbjct 1439745 GCTGTCTTTATACAGCATGAACGGACCTCCTGTTTCGATTTGACTCGTGAGAATCGCCTT 1439686
Query 62926 CCAGACGACTCGAGCCTTTATTATAGATTTGTAT---CTCTT-TTCTCTTTCGTATAGTG 62981
| | | |||| || ||| ||| ||||| | ||| ||||| | | || ||
Sbjct 1439685 GAACAGCTCCTGAGCGTTGATTTGAGAATTGTACAGCCCCTTCTTCTCATACTCATTGT- 1439627
Query 62982 TATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAGTCCAGGACATTCATCCGGA- 63040
|||| | ||||| ||||||||||| |||| ||||||| ||| | | || ||
Sbjct 1439626 ---ACAACCTCTCGAAATCGTCTCCCCAGACATCAGCCAGTCCTGGAGCT-CTTCTGGGG 1439571
Query 63041 CACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAA 63100
|| | | |||||| | | || | | | ||| ||||||||| | |||||| | |||
Sbjct 1439570 CAGAAAAGCGACCATTTTTCGCCGTTTTCGACTTTTTTCATAAACAAATCAGGCACCCAG 1439511
Query 63101 AGAGCTATA-AATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATC 63159
||||| ||| || || || | | ||| | |||||| || ||| ||| | ||
Sbjct 1439510 AGAGC-ATAGAACAGGTCACGTGCTCTGTTTTCCTCTGCGCCATGATTTTTTCGCAAATT 1439452
Query 63160 GAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCG 63219
|| || ||| |||||| | |||||| || ||||| || | || | ||||||| ||
Sbjct 1439451 CAGAAAATCCAAAATATCCGCATGCCAAGGCTCCAAATACACTGCAAACGCTCCAGGTCG 1439392
Query 63220 TTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAAT 63279
||||||||| || ||||| | ||| | ||||| || || | ||||| | ||| ||||
Sbjct 1439391 TTTGTTTCCCCCTTGATCAACGTACCGTGCGGTATTGTTGAACACTCTGAGCATGGGAAC 1439332
Query 63280 AATACCATTGGATGTACCATTGGTCCCTGAGAT-ATAGCTTCCACTGGCACGAATATTAC 63338
||||| || || | | |||| || | ||| ||| |||| | || ||
Sbjct 1439331 GATACCTGAAGACCGTCCTTGAGAACCTGTAATGAGAGC-TCCTTTGGCTCTGATGTTGT 1439273
Query 63339 TAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTT-AACGTA 63397
||| |||||||| || ||||| |||| || || || || |||||| | |||
Sbjct 1439272 GAATATGCAGACCTATACCTCCTGCTGTTTTGGAAATCTGAGCACA-CGTTTTGAGCGTG 1439214
Query 63398 TCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGG 63457
|| |||||||| || || || | |||| || ||||||||| ||| |
Sbjct 1439213 TCGTAGATGCCGTCAATGGAGTCTGCTGCCATGGCAACGAGAAAACAG---GACGAAAGC 1439157
Query 63458 TGAC---GACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGAGTAAACCATTTTTCA 63514
|||| || ||| || ||||| || |||||||||||||| ||||| ||| ||| | |
Sbjct 1439156 TGACCCTGAGGAGTACCTGCATTGAACAAGGTAGGAGAAGCATGAGTGAAC--TTTCTGA 1439099
Query 63515 G----AAAGTAGATTGTACGTCTC-AATAGCTGAGTCTATATCCCATTGATGAATTCCTA 63569
| |||| ||| |||||| || | | || || |||| | || || |||
Sbjct 1439098 GAGATAAAGCAGA--GTACGTTTCGAGCACCTTGGT-GGTATCGTCTCCGTGGATGGCTA 1439042
Query 63570 CTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGT-TGTTTATTTTCAAC 63628
|| || ||||| | ||| || ||||||||||| || | || || | ||| ||||
Sbjct 1439041 GTGATACTCGCATGAGCATCTGTTGAGGTCTTTCCACTA-CTCGTCCCTGGATTCTCAAA 1438983
Query 63629 AAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTC 63680
| ||| ||||||||||| || || || ||||| ||| ||| | | |||||
Sbjct 1438982 AGGTACGATTTTTCCAACGTCTTGAATCCAAAGTAGGAGTAAGTGAGGTCTC 1438931
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 633631849512400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |