Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yarrowia_20sp._20JCM_2030694_20[genbank_20GCA_5F001600515.1_202016- 03-01] 19 sequences; 21,758,297 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq6 219 5e-52 >seq6 Length=2655350 Score = 219 bits (242), Expect = 5e-52 Identities = 403/590 (68%), Gaps = 3/590 (1%) Strand=Plus/Minus Query 93092 CACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAAA 93151 || ||||||||||| || | ||| || ||||| || || | ||| ||| ||| || | Sbjct 574909 CAGGCAAAGTCGGTGTGCAGACCCTCATCTCGAGAAATGAGCTCGTTGGAGAAGGTCAGG 574850 Query 93152 CCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaaT 93211 || || | || ||||| ||||||||||| || || || |||||| || || || || Sbjct 574849 CCAGGCATGAGACCTCGCTTCTTGAGCCAGAAAATGGAGGCAAAAGATCCGGAGAAGAAA 574790 Query 93212 ATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTACTGCTG 93271 ||||| || ||||| ||||| || | || || ||| |||| | | | | | Sbjct 574789 ATACCCTCAACGGCAGCAAAGGCGATAAGTCGCTCGCCAAAGGTAGACTCGTCGTCGGAG 574730 Query 93272 ATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGCGTTA 93331 ||||| || | |||||| ||||| || ||||| || || || | || || || ||||| Sbjct 574729 ATCCACTTGAGAGCCCAGTCGGCCTTCTTCTTGATGCAGGGAATGGTCTCAATGGCGTTG 574670 Query 93332 AATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATACATT 93391 || |||||| |||||| | | || ||||| ||||| || | |||||| || | Sbjct 574669 AACAGGTAAGTTCGCTCCTTGGGGTCCTTGATGTAAGTATCAATGAGCAGAGAGTAGGTC 574610 Query 93392 TCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGTGATC 93451 || ||||||| |||||||| || |||||||||||||| || | || || | | Sbjct 574609 TCGGAATGGATGTTCTCCATCATGATCTGGAATCCGTAGAAGCACTTGGCCTCAGGAGCC 574550 Query 93452 TGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGCTGCa 93511 || || ||| ||| || | ||| || || || || ||||| ||||| || || || ||| Sbjct 574549 TGAACCTCTCCAGAGAACCGCTCAACCAGGTTCTCGTTGACAATACCGTCAGAGGCAGCA 574490 Query 93512 aaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATCTTTAAGC---TTATCCCAA 93568 || ||||||| | ||| || ||| ||||| || || ||| || ||||| Sbjct 574489 AAGAAAGCCAGCACGTGCGAAATGAAAAACTTCTCGTCGCTGTTGAGCCGGTTCTCCCAG 574430 Query 93569 TCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGCTTTT 93628 ||| | ||| || ||||| | || ||| | ||||| || || || || || || Sbjct 574429 TCGCCCATATCCTTGCCGAGATCAATCTCCTCGGCGGTCCAGAAAGAAGCCTCGGCCTTC 574370 Query 93629 TTGTACATATCCCATATGTCTTGATATTGAATTGGAAATATGACAAAACG 93678 |||||||| | ||| || || || || ||||| || || | ||||| || Sbjct 574369 TTGTACATCTGCCAAATCTCATGGTACTGAATAGGGAAGAGCACAAACCG 574320 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556860667745560