Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20sp._20JCM_2030694_20[genbank_20GCA_5F001600515.1_202016-
03-01] 19 sequences; 21,758,297 total letters
Query= NC_008518.1
Length=174059
Score E
Sequences producing significant alignments: (Bits) Value
seq6 219 5e-52
>seq6
Length=2655350
Score = 219 bits (242), Expect = 5e-52
Identities = 403/590 (68%), Gaps = 3/590 (1%)
Strand=Plus/Minus
Query 93092 CACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAAA 93151
|| ||||||||||| || | ||| || ||||| || || | ||| ||| ||| || |
Sbjct 574909 CAGGCAAAGTCGGTGTGCAGACCCTCATCTCGAGAAATGAGCTCGTTGGAGAAGGTCAGG 574850
Query 93152 CCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaaT 93211
|| || | || ||||| ||||||||||| || || || |||||| || || || ||
Sbjct 574849 CCAGGCATGAGACCTCGCTTCTTGAGCCAGAAAATGGAGGCAAAAGATCCGGAGAAGAAA 574790
Query 93212 ATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTACTGCTG 93271
||||| || ||||| ||||| || | || || ||| |||| | | | | |
Sbjct 574789 ATACCCTCAACGGCAGCAAAGGCGATAAGTCGCTCGCCAAAGGTAGACTCGTCGTCGGAG 574730
Query 93272 ATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGCGTTA 93331
||||| || | |||||| ||||| || ||||| || || || | || || || |||||
Sbjct 574729 ATCCACTTGAGAGCCCAGTCGGCCTTCTTCTTGATGCAGGGAATGGTCTCAATGGCGTTG 574670
Query 93332 AATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATACATT 93391
|| |||||| |||||| | | || ||||| ||||| || | |||||| || |
Sbjct 574669 AACAGGTAAGTTCGCTCCTTGGGGTCCTTGATGTAAGTATCAATGAGCAGAGAGTAGGTC 574610
Query 93392 TCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGTGATC 93451
|| ||||||| |||||||| || |||||||||||||| || | || || | |
Sbjct 574609 TCGGAATGGATGTTCTCCATCATGATCTGGAATCCGTAGAAGCACTTGGCCTCAGGAGCC 574550
Query 93452 TGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGCTGCa 93511
|| || ||| ||| || | ||| || || || || ||||| ||||| || || || |||
Sbjct 574549 TGAACCTCTCCAGAGAACCGCTCAACCAGGTTCTCGTTGACAATACCGTCAGAGGCAGCA 574490
Query 93512 aaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATCTTTAAGC---TTATCCCAA 93568
|| ||||||| | ||| || ||| ||||| || || ||| || |||||
Sbjct 574489 AAGAAAGCCAGCACGTGCGAAATGAAAAACTTCTCGTCGCTGTTGAGCCGGTTCTCCCAG 574430
Query 93569 TCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGCTTTT 93628
||| | ||| || ||||| | || ||| | ||||| || || || || || ||
Sbjct 574429 TCGCCCATATCCTTGCCGAGATCAATCTCCTCGGCGGTCCAGAAAGAAGCCTCGGCCTTC 574370
Query 93629 TTGTACATATCCCATATGTCTTGATATTGAATTGGAAATATGACAAAACG 93678
|||||||| | ||| || || || || ||||| || || | ||||| ||
Sbjct 574369 TTGTACATCTGCCAAATCTCATGGTACTGAATAGGGAAGAGCACAAACCG 574320
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 556860667745560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |