Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20sp._20JCM_2030694_20[genbank_20GCA_5F001600515.1_202016-
03-01] 19 sequences; 21,758,297 total letters
Query= NC_009011.2
Length=131331
Score E
Sequences producing significant alignments: (Bits) Value
seq1 127 2e-24
seq2 91.5 1e-13
>seq1
Length=4845111
Score = 127 bits (140), Expect = 2e-24
Identities = 166/230 (72%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
||||| || || |||| | || | ||| | ||||| || || || |||||||| |||
Sbjct 2007179 ATACCACCTCGAAGTCGAAGGACCAGATGGAGAGTAGACTCCTTCTGGATGTTGTAGTCG 2007238
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
|| ||| || |||||| || || ||||||||| | ||||| ||||| ||||||||
Sbjct 2007239 GACAGAGTTCGTCCATCTTCGAGCTGCTTACCAGCGAAAATGAGTCGCTGCTGGTCCGGG 2007298
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
||||| || || ||||| |||||| || | | |||| |||||||| ||| |||
Sbjct 2007299 GGAATTCCCTCCTTGTCCTGAATCTTGGACTTGACATTGTCAATGGTGTCGGAGGACTCG 2007358
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| || | ||| | || || || || || || || || |||||||||||
Sbjct 2007359 ACCTCAAGGGTAATGGTCTTTCCAGTGAGGGTCTTCACGAAAATCTGCAT 2007408
Score = 107 bits (118), Expect = 2e-18
Identities = 142/197 (72%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245
|| || || || || ||||||||||| || ||| || ||| ||||| || |||||
Sbjct 2006984 GTGGACTCCTTCTGGATGTTGTAATCAGACAGAGTTCGTCCATCCTCAAGCTGCTTACCG 2007043
Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305
||| |||| || ||||| |||||||| ||||| || || ||||| |||||| ||
Sbjct 2007044 GCGAAGATAAGTCGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCCTGAATCTTAGACTTG 2007103
Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365
| | |||| |||||| | || || || || | ||| | || || || ||||||||
Sbjct 2007104 ACGTTGTCAATGGTGTCAGAAGACTCAACCTCGAGGGTGATGGTCTTTCCAGTCAGAGTC 2007163
Query 114366 TTTACAAAAATCTGCAT 114382
|| ||||| ||||||||
Sbjct 2007164 TTGACAAAGATCTGCAT 2007180
Score = 104 bits (114), Expect = 2e-17
Identities = 161/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
||||| || || |||| | || | ||| | || || || || || |||||||| ||
Sbjct 2007407 ATACCACCTCGGAGTCGGAGGACAAGATGAAGGGTGGACTCCTTCTGGATGTTGTAGTCA 2007466
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
|| ||| || || ||||| || || |||||| | ||||| ||||| ||||||||
Sbjct 2007467 GACAGAGTTCGTCCGTCCTCAAGCTGCTTTCCAGCGAAAATGAGTCGCTGCTGGTCCGGG 2007526
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
|| || || || ||||| |||||| || | | |||| |||||| | || |||
Sbjct 2007527 GGGATTCCCTCCTTGTCCTGAATCTTGGACTTGACGTTGTCAATGGTGTCAGAAGACTCG 2007586
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| || | ||| | || ||||||||||| || || || || ||||||||
Sbjct 2007587 ACCTCAAGGGTGATAGTCTTGCCGGTCAGGGTCTTGACGAAGATCTGCAT 2007636
>seq2
Length=4150472
Score = 91.5 bits (100), Expect = 1e-13
Identities = 157/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 114155 ACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCT 114214
||| || || |||| || ||| | ||| | || || || || || |||||||| ||
Sbjct 3070618 ACCACCTCGGAGTCGCAGAACGAGATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGA 3070559
Query 114215 CATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGG 114274
| || || || || || || ||||| ||| |||| || ||||| |||||||| ||
Sbjct 3070558 AAGGGTTCGGCCGTCCTCGAGCTGCTTACCGGCGAAGATAAGTCGCTGCTGGTCCGGGGG 3070499
Query 114275 AATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGAC 114334
||| || || ||||| ||||| || | | || | |||||||| || || ||
Sbjct 3070498 AATTCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCAC 3070439
Query 114335 GTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| | ||| | || || ||||| || || || ||||||||||||||
Sbjct 3070438 CTCAAGGGTGATAGTCTTACCGGTAAGGGTCTTGACAAAAATCTGCAT 3070391
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 420134302712628
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |