Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yarrowia_20sp._20JCM_2030694_20[genbank_20GCA_5F001600515.1_202016- 03-01] 19 sequences; 21,758,297 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq2 508 1e-138 seq6 389 7e-103 >seq2 Length=4150472 Score = 508 bits (562), Expect = 1e-138 Identities = 1150/1717 (67%), Gaps = 63/1717 (4%) Strand=Plus/Minus Query 243741 TGAACTGGACGGGTGCGACGGCGGCCTTGGTCCTCAGGTAGTACATGCCGGTCTTGAGTC 243800 ||||||||| ||| || |||| ||| |||| | |||||||||||| ||||||||||| | Sbjct 326333 TGAACTGGATGGGGGCAGCGGCAGCCATGGTTCGCAGGTAGTACATACCGGTCTTGAGAC 326274 Query 243801 CACTGGACCAGGCGTGGAGGTGCATGGCCGTCAGCTTCTTCATCTTGAGCTTTGGGTCGT 243860 | | |||| ||| || |||||||| || ||||| ||| || ||| Sbjct 326273 CCTTCTTCCAGCCGTAGAAGTGCATGGAAGTGAGCTTACCCATGGTGGGCT--------- 326223 Query 243861 CCTCGCACAGAAAGAGGTTGAGGGACTGGCTCTGGTCGACGAAGGGCGCCCGCTCTGCGG 243920 ||| | ||| | |||||||||||| |||||| | |||||| | || || |||| Sbjct 326222 CCTTGATGTGAATG---TTGAGGGACTGGGACTGGTCAATGAAGGGAGATCGGTCGGCGG 326166 Query 243921 CCATGGTGATGAGGTCCTTCTGAGATATCTCATACGCCGTCTTGTAGATGGGCTTGAGGT 243980 |||| ||||| |||||| || ||||| || | |||||||| | ||||| | Sbjct 326165 CCATCTCGATGATTCGCTTCTGGGAAATCTCCCACACGGTCTTGTACAGCTCCTTGATCT 326106 Query 243981 GCTCGGGGAACCCTTCGATGTTCTGCACCGAGCCCTTGTGGACGATGAGCTGGGTGCGCA 244040 || ||||| |||||||||||| || || |||| | ||| | || | || Sbjct 326105 CCTGGGGGATGTTGGGGATGTTCTGCACGGATCCGTTGTCGGCGACAATTCGGTTCTTCA 326046 Query 244041 TGTTATCGTTCCACAGGCCCAAGCGCTCCAGCGCCTCGA----CCAGGTGCCTGTTCACC 244096 | | |||||||| || || | | || ||| || ||||| | || || Sbjct 326045 TAGTCTCGTTCCAGAGACCGACCTCAACAAGGTCCTTGAGAAGCCAGGGG----TTGACA 325990 Query 244097 ACCTGAAACTCTCCCGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGGCTCGATG 244156 | ||| ||||| || | || || || || ||| | |||| | || ||||||| | Sbjct 325989 ATCTGGAACTCACCGGCAAGAACTCGTCGAGAGTAAATGTTGGAGGTGTAAGGCTCGAAG 325930 Query 244157 CTCTCCGTGTTGCCCAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACACCAGCAGA 244216 | ||| || ||| || ||||| | || ||||| ||||| || | ||||||||| Sbjct 325929 CACTCGTTGAAGCCGAGAATCTGAGAGGTAGAAGCAGTGGGCATAGGAGCGACCAGCAGA 325870 Query 244217 CTGTTCCTCACGCCGTGCCTCTGGATGC-GGAGTCTGAGCTCGTTCCAGTCCCACATGCC 244275 ||| | || |||||| | | ||| | |||| |||| ||| ||||| | || Sbjct 325869 GAGTTTCGCAGACCGTGCTTGACAACCTTGGACT-TGAGGTCGTCCCACTCCCAGA-GCT 325812 Query 244276 CGAGAGGTCCTCGCGTTTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTTGCTGACGGG 244335 || | || |||| ||||||||| |||||||| |||||| | | || Sbjct 325811 CG-GTGGGGGAAACGTT-------CCACATGTCGAACTGCAGGTCTCCCTTGGAGGCAGG 325760 Query 244336 GCTGCCCTCGTAGGTCGGGTAGGGACCGTCGCGCTGGGCCAGCT---TACAGCTCTCGTC 244392 ||||| | ||||| ||||| ||| || ||||| || || || |||| | Sbjct 325759 AGAGCCCTGGAAGGTCTCGTAGGCACCCTCCTCAATGGCCATCTCCATAGAGGCCTCGAC 325700 Query 244393 GAGGGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCTTGCCGCA 244452 | || ||| ||||||||||||||||||| |||| | | ||||| | || | Sbjct 325699 G---GCTCCGTGGTAGATGGTCTCGAAGATCTGGATGTTGAGCTTCTTGGCCTCGTCGGA 325643 Query 244453 GGTGAAGGGGATGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCGATGCCGAT 244512 ||||||| | || ||||||| || ||||| ||||| || || | |||| Sbjct 325642 CTCAAAGGGGAGACGCAGAGCCATGAAGGTATCAGCCAGACCCTGGACACCCAGAGCGAT 325583 Query 244513 GGGTCTGTGTCGCTTGTTGGAGCGCATGGCTTCGGGCACGGGGTAAAAGTTGCCGTCGAT 244572 ||||| ||||||| ||||||| | |||| ||||| |||||||| |||| | |||||| Sbjct 325582 GGGTCGGTGTCGCATGTTGGACTTCTTGGCCTCGGGAACGGGGTAGTAGTTTCGGTCGAT 325523 Query 244573 CACCTTGTTGAGGTTGCGGGTGATCATGCGGACGACGTCGGCCAGCAGCTGAAAGTCGTA 244632 | ||||||||| || || | | | | || |||| || |||||||| Sbjct 325522 GATGGCGTTGAGGTTTCGCACAATGACCTTGGCAATATCATGCAGCTTCTTGAAGTCGTA 325463 Query 244633 ---CTCGTAGGGATCCTCGGCGATGGTGATCCTCACAAACTCGTTGAGGGCGACGCTGGC 244689 | || || || || ||| |||| || | || || | | ||| Sbjct 325462 GAACGAGTTGGTCTCGTCT-CGAG--------TCACGAAAGTGGGCAGAGCAATGGAGGC 325412 Query 244690 CAGGTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGGTT 244749 ||||||||||||||| ||||| || | | ||||| |||||||||| || ||||| Sbjct 325411 CAGGTTGCAGACGGCAACCTCATCGGGAGAAGAGTACTCGACAATCTCGCAACACAGGTT 325352 Query 244750 ACTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTGTA 244809 |||||||||| ||||||| || || |||||||| |||||||| ||||||||| Sbjct 325351 GGAAGACTTGATGGTTCCCAGGTTCTTCTGGTTGGACTTTCGGTTGCAGGAGTCCTTGTA 325292 Query 244810 GAGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGGTCCCT 244869 |||||||||||| |||| |||| |||| | |||| | | || ||| || | | Sbjct 325291 GAGCATGAAGGGGTTTCCGGACTCGGTCTGGCAGTCGAGAATGTGGTACCACAGCTTCTG 325232 Query 244870 AGCCTTGACCGTCCTGCGAGCCTTG-CCCTCTGCCTCGTAGCGGGTGTACAGGGCCTCGA 244928 || || || | || |||| | |||||| |||||| | |||||| || || Sbjct 325231 GGCGGGGATGGTTCGTCG-GCCTCGTCCCTCTCGCTCGTACTGCTCGTACAGCTTCTTGA 325173 Query 244929 ACTCGGGGCCCCAGACCTCGTCTAGGCCGGGGCACGACGCCGGGCACATGAGACTCCACT 244988 ||||| || |||| ||||| || ||||||||| ||||||||||| |||||| Sbjct 325172 ACTCGTCACCGTAGACGTCGTCAAGACCGGGGCACTCGTTGGGGCACATGAGGGTCCACT 325113 Query 244989 CGCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGGT 245048 ||||| | || ||| | || |||||| |||||||| ||||| |||||| |||| |||| Sbjct 325112 CGCCGTTCTGCTCGACTCGCTCCATGAACAGGTCGGGAATCCACAGGGCCAGGAACAGGT 325053 Query 245049 CCCTGGTCCTCTG--CTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGAC 245106 | | || ||| | ||| ||| || |||||| | |||||| | || || |||| Sbjct 325052 CTCGGG--CTCGGATCTCCTCCTTTCCGTGGTTCTTTCGCAGCTCGCAGAACTCGAAGAT 324995 Query 245107 GTCGACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCCTG 245166 |||| ||||||| ||||| | ||| | || | ||| ||||| |||||||| || ||||| Sbjct 324994 GTCGTCGTGCCAAGGCTCAAGGTACATGGCAAAGGCTCCGGGTCGCTTGTTACCACCCTG 324935 Query 245167 GTCCACCATCCTCTCGAGC----GCGTTGAAGATGCGCAGGGTAGGCACTATGCCGTTAG 245222 || || | | ||| || |||| ||| || || | ||||| || ||||| | Sbjct 324934 GT----CAACGTATCGGGCAGTGTTGTTGTAGACTCGGAGCATGGGCACGATACCGTTGG 324879 Query 245223 AGTGGCCGTTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTGAGGTTGCTGATGGACATGC 245282 || ||||||||||| ||||||| ||| || | | | |||| |||||| | | Sbjct 324878 AGGTACCGTTGGTGCCGGCAATGTAGGAGCCGGTGGCTCGAATGTTGTGGATGGAGAGAC 324819 Query 245283 CTAGTCCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTATGCCCT 245342 | | || ||||| |||||||||||| || ||| |||||| ||| || ||||| | Sbjct 324818 CGATACCTCCGGCAGACTTGGAGATGAGAGCACAGGTCTTGAGGGTATCGTAGATGCCGT 324759 Query 245343 CCATGCTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCTTGGGGCTGC 245402 | ||| ||| ||||||||||| || || || || |||| |||||||| |||| | | Sbjct 324758 CGATGGAGTCGTCCTTCATGTTGACGAGGAAACACGAAGACATCTGGGGCTGGGGGGTTC 324699 Query 245403 ACGAGTTGAACAGAGTGGGGCTGGCGTGGGTAAAGTA 245439 | |||| | ||||||||| |||||||| ||||| Sbjct 324698 CAGCGTTGTAGAGAGTGGGGGAAGCGTGGGTGAAGTA 324662 >seq6 Length=2655350 Score = 389 bits (430), Expect = 7e-103 Identities = 619/875 (71%), Gaps = 36/875 (4%) Strand=Plus/Plus Query 42289 AGCACCAGGACATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGG 42348 || |||| || || ||| |||||||||||||| || || |||||||||||||| Sbjct 574342 AGTACCATGAGATTTGGCAGATGTACAAGAAGGCCGAGGCTTCTTTCTGGACCGCCGAGG 574401 Query 42349 AGATTGACCTGGCCAAGGACACGGCCGGCTGGGAGTCACTGTCTGAGAA----CGAAAAG 42404 ||||||| || | |||||| | || || ||||||| || | || | | ||| ||| Sbjct 574402 AGATTGATCTCGGCAAGGATATGGGCGACTGGGAGA-ACCGGCTCAACAGCGACGAGAAG 574460 Query 42405 TTTTTCCTCAAAAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAAC 42464 |||||| | || | ||||| ||||| || ||||||||||| || ||||| |||||| Sbjct 574461 TTTTTCATTTCGCACGTGCTGGCTTTCTTTGCTGCCTCTGACGGTATTGTCAACGAGAAC 574520 Query 42465 CTGGCCACCAGGTTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTC 42524 |||| ||||| |||||| ||| |||||| ||||||||||| ||| Sbjct 574521 CTGGTTGAGCGGTTCTCTGGAGAGGTTCAGGCTCCTGAGGCCAAGTGCTTCTACGGATTC 574580 Query 42525 CAGATAGCCATAGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCA---ACACGTAC 42581 ||||| || |||||| | || || ||| ||| | ||||||| | || ||| Sbjct 574581 CAGATCATGATGGAGAACATCCATTCCGAGACCTACTCT---CTGCTCATTGATACTTAC 574637 Query 42582 ATCCTGGATCCCGTCGAGCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATC 42641 ||| ||| ||| ||||| | |||||||| ||||| ||||| || ||||||||| Sbjct 574638 ATCAAGGACCCCAAGGAGCGAACTTACCTGTTCAACGCCATTGAGACCATTCCCTGCATC 574697 Query 42642 AAGAAGAAGGCGGACTGGGCGCTCAACTGGATCGAGAGTCC--CGACG---CAACGTTCG 42696 ||||||||||| |||||||| ||||| |||||| ||| ||||| | || || | Sbjct 574698 AAGAAGAAGGCCGACTGGGCTCTCAAGTGGATC-----TCCGACGACGAGTCTACCTTTG 574752 Query 42697 GCGAGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCT 42756 ||||| | || | |||||| | ||||| ||||| || |||||||| || | || |||| Sbjct 574753 GCGAGCGACTTATCGCCTTTGCTGCCGTTGAGGGTATTTTCTTCTCCGGATCTTTTGCCT 574812 Query 42757 CCATCTTCTGGCTCAAGCAG-AAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTC 42815 |||| |||||||||||| || |||| || ||||| || || |||||||| ||||| ||| Sbjct 574813 CCATTTTCTGGCTCAAGAAGCGAGGTCTC-ATGCCTGGCCTGACCTTCTCCAACGAGCTC 574871 Query 42816 ATCAGCAGGGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTC 42875 || | || ||||| ||||| | ||||||||||| || || ||||| |||||| Sbjct 574872 ATTTCTCGAGATGAGGGTCTGCACACCGACTTTGCCTGTCTGCTCTTCTC---TCACCTC 574928 Query 42876 AGGCACAAGCCCTCGAAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAG 42935 | || ||||| ||| || ||| || | |||| ||||| || | || ||| Sbjct 574929 GAGAACCGACCCTCCAAGAAGATTGTCGAGGACGTCATTGTCGAGGCTGTTGGCATTGAG 574988 Query 42936 AAGGAGTTCCTCACGCAGTCGCTGCCCGTGT-CCCTGGTCGGCATGAACCACGACCTCAT 42994 |||||||||| || | | || ||| ||| ||| |||| |||||| | | ||||| Sbjct 574989 CAGGAGTTCCTTACTGATGCTCT-CCCTTGTGGTCTGCTCGGTATGAACGCCAAGCTCAT 575047 Query 42995 GTGCAAGTACATCCAGTACGTCGCCGACCATCT-CCTGTGCCAGATGGGTCTCAGCCGC- 43052 | | ||||||| ||| || ||||||| ||| | ||| | ||| | || | Sbjct 575048 GCGACAGTACATTGAGTTTGTGGCCGACCGTCTGCTTGTTGCTCTTGG----AAACCCCA 575103 Query 43053 --CTCTACAACACGCCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGA 43110 |||||||| | | |||||| ||||| ||||||||||| || ||| || |||| Sbjct 575104 AGGTCTACAACTCCACCAACCCCTTTGACTTCATGGAGAACATTTCTCTGGCTGGAAAGA 575163 Query 43111 CCAACTTTTTCGAGAAGCGCGTCGCCGACTACCAG 43145 ||||||| ||||||||||| || | ||||||||| Sbjct 575164 CCAACTTCTTCGAGAAGCGAGTGTCTGACTACCAG 575198 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944338975719440