Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20sp._20JCM_2030694_20[genbank_20GCA_5F001600515.1_202016-
03-01] 19 sequences; 21,758,297 total letters
Query= NC_009899.1
Length=344691
Score E
Sequences producing significant alignments: (Bits) Value
seq1 129 1e-24
seq6 104 5e-17
>seq1
Length=4845111
Score = 129 bits (142), Expect = 1e-24
Identities = 133/174 (76%), Gaps = 0/174 (0%)
Strand=Plus/Plus
Query 334181 GGGGAACCCTTCAAGCTGACCGTTCACAATAGCGCGCATCAGAGTTGATTTACCCGCCCC 334240
|||||| || || | ||| ||||| |||| || ||||||||||| || ||||| || ||
Sbjct 2675900 GGGGAAACCCTCGACCTGGCCGTTGGCAATGGCTCGCATCAGAGTAGACTTACCAGCACC 2675959
Query 334241 GTTTGGCCCACACAGACCGTAGCGGTTTCCACGCTTCAGATTGAACCGCGTATTGTTCAG 334300
||| || |||||||||||||| || || ||||| ||| | | | || ||||||
Sbjct 2675960 GTTGGGGCCACACAGACCGTATCGTCGGCCTCGCTTGAGACGCAGCTGGGTTCGGTTCAG 2676019
Query 334301 AAGAATTTTTCCACCATATGCCAGAGAAAATTCACAATCACACAGATCCTCACC 334354
||||| || |||| || |||||||| || ||||| | |||||||||||||||
Sbjct 2676020 CAGAATCTTGGCACCGTAAGCCAGAGAGAACTCACAGTTACACAGATCCTCACC 2676073
>seq6
Length=2655350
Score = 104 bits (114), Expect = 5e-17
Identities = 348/537 (65%), Gaps = 11/537 (2%)
Strand=Plus/Plus
Query 243196 GAGCGAAACGAGCTTTTCGACGCCATCGAAAACATTCCGGCGGTTCATAACAAGGCAAAA 243255
||||||| | || ||| ||||||| || | |||||| | | || ||||| |
Sbjct 574653 GAGCGAACTTACCTGTTCAACGCCATTGAGACCATTCCCTGCATCAAGAAGAAGGCCGAC 574712
Query 243256 TGGGCTCAGAAGTGGCTA---GAACCCG-GTAAATCATTTGCTGAGCGTCTCGTCGCCTG 243311
||||||| |||||| | || || || | | || || ||||| || ||||||
Sbjct 574713 TGGGCTCTCAAGTGGATCTCCGACGACGAGTCTACCTTTGGC-GAGCGACTTATCGCCTT 574771
Query 243312 GGTGTGCGTTGAAGGTATTCTGTTTTCCGGGAGTTTCTGCGCCATCTTTTGGCTGCGGAA 243371
| |||||| |||||| | || ||||| ||| | |||| || ||||| |||
Sbjct 574772 TGCTGCCGTTGAGGGTATTTTCTTCTCCGGATCTTTTGCCTCCATTTTCTGGCTCAAGAA 574831
Query 243372 CAAAGGTGTGATGCCTGGCCTCGGTCTGTCTAACGAGTTCATCAGTCGCGACGAGGGCCT 243431
|||| | ||||||||||| | || |||||| |||| ||| || ||||| ||
Sbjct 574832 GCGAGGTCTCATGCCTGGCCTGACCTTCTCCAACGAGCTCATTTCTCGAGATGAGGGTCT 574891
Query 243432 TCACCAACAGTTCGGTGAGCTTATGTATTCAAAGCTCCAGAACAAGCTACCATTCGAAAC 243491
||| | || | || | | || | ||| ||||| | ||| | | | |
Sbjct 574892 GCACACCGACTTTGCCTGTCTGCTCTTCTCTCACCTCGAGAAC---CGACCCTCCAAGAA 574948
Query 243492 G---GTCAAACAAATCATCACAGAAGCAGTTGAAAACGAAAAGGAATTCATTTGCGACGC 243548
| ||| | | |||| || || |||| | || |||| ||| || || ||
Sbjct 574949 GATTGTCGAGGACGTCATTGTCGAGGCTGTTGGCATTGAGCAGGAGTTCCTTACTGATGC 575008
Query 243549 TATTCCATGCCGGCTTATTGGCATGAACTCTGAACTCATGGGACAGTACATCGAATTCGT 243608
| | || || | || | || |||||| | | |||||| |||||||||| || || ||
Sbjct 575009 TCTCCCTTGTGGTCTGCTCGGTATGAACGCCAAGCTCATGCGACAGTACATTGAGTTTGT 575068
Query 243609 AGCCGACCGCATTTTCATCGCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTT 243668
|||||||| | | | || ||||| | || || |||||||||| ||||||||
Sbjct 575069 GGCCGACCGTCTGCTTGTTGCTCTTGGAAACCCCAAGGTCTACAACTCCACCAACCCCTT 575128
Query 243669 TGCCTTTATGGAGCTCATTTCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGTGT 243725
|| ||| |||||| |||||| || || || || ||||||||||| ||||| ||
Sbjct 575129 TGACTTCATGGAGAACATTTCTCTGGCTGGAAAGACCAACTTCTTCGAGAAGCGAGT 575185
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1102879731517650
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |