Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20sp._20JCM_2030694_20[genbank_20GCA_5F001600515.1_202016-
03-01] 19 sequences; 21,758,297 total letters
Query= NC_010191.2
Length=186713
Score E
Sequences producing significant alignments: (Bits) Value
seq2 215 6e-51
seq6 107 2e-18
>seq2
Length=4150472
Score = 215 bits (238), Expect = 6e-51
Identities = 1144/1796 (64%), Gaps = 61/1796 (3%)
Strand=Plus/Minus
Query 113558 TCAAGGCTGAACTGAATGGGTCTCGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTC 113617
|||| | ||||||| ||||| || ||| | | ||| ||||||||||| || |||
Sbjct 326340 TCAATGGTGAACTGGATGGGGGCAGCGGCAGCCATGGTTCGCAGGTAGTACATACCGGTC 326281
Query 113618 TTGAGCCCCTGCTTCCAGGCATACATATGCATCGAGGACAACTTGGAGAGTGTTGGACTT 113677
||||| |||| ||||||| | || | ||||| || | | ||| | || ||| ||
Sbjct 326280 TTGAGACCCTTCTTCCAGCCGTAGAAGTGCATGGAAGTGAGCTTACCCA-TGGTGGGCT- 326223
Query 113678 TCCATGAAGAG---GTTCATACTTTGGGATTGATCGATGAAGCGTCCACGATCCGCCGCC 113734
|| ||| | | ||| | ||||| || || |||||| | || || || |||
Sbjct 326222 -CCTTGATGTGAATGTTGAGGGACTGGGACTGGTCAATGAAGGGAGATCGGTCGGCGGCC 326164
Query 113735 ATATCAATCACATCCTTCATCTTGATTTCCCACACAGTTCTGTAGAGGTTCTTAATATCA 113794
|| || || | |||| || |||||||| || |||| || | ||| || ||
Sbjct 326163 ATCTCGATGATTCGCTTCTGGGAAATCTCCCACACGGTCTTGTACAGCTCCTTGATCTCC 326104
Query 113795 TCTGGGATATCCACGATATTTTGGATGGAGCCACCCGCCTTGACCATGAGATCCTTCATA 113854
| ||||| | ||| || || | ||| || | ||| || | | |||||||
Sbjct 326103 TGGGGGATGTTGGGGATGTTCTGCACGGATCCGTTGTCGGCGACAATTCGGTTCTTCATA 326044
Query 113855 TCCTTTGACCAGAGACCAATCTTTTTGAGATCCTCCACGAGATGCTTA---TTGACAACA 113911
|| ||||||||| | || || |||| |||| || |||||||
Sbjct 326043 GTCTCGTTCCAGAGACCGACCTCAACAAGGTCCTT---GAGAAGCCAGGGGTTGACAATC 325987
Query 113912 ACAAACTCACCCGCGAGGGTGCGTCTCAGA-TAGATATTGGTCGTGTATGGCTCAAAGCA 113970
|||||||| || || |||| ||| || || |||| ||||| ||||| |||||
Sbjct 325986 TGGAACTCACCGGCAAGAACTCGTCG-AGAGTAAATGTTGGAGGTGTAAGGCTCGAAGCA 325928
Query 113971 CTCATTGTTACCCAAGATTTGGGCGGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCT 114030
||| ||| || | || || | ||| || || |||||||| || || | || ||
Sbjct 325927 CTCGTTGAAGCCGAGAATCTGAGAGGTAGAAGCAGTGGGCATAGGAGCGACCAGCAGAGA 325868
Query 114031 GTTACGGAGACCCTTTTCCCTAATGCGTTC--CTTGAGGGCGTCCCAGTCGTAGTTGAGC 114088
||| || ||||| | | || | || ||||||| ||||||| || || |||
Sbjct 325867 GTTTCGCAGACCGTGCTTGACAA--CCTTGGACTTGAGGTCGTCCCACTCCCAG---AGC 325813
Query 114089 TTTGTCTCCC---CCTGCCACATATCAAACTGGAGGATACCTTGGGAGGCTGGCGATCCC 114145
| || | | |||||| || ||||| ||| || | |||||| || || |||
Sbjct 325812 TCGGTGGGGGAAACGTTCCACATGTCGAACTGCAGGTCTCCCTTGGAGGCAGGAGAGCCC 325753
Query 114146 TCAAATGTCTCGTATGGGCCCTCAACCTCCGCCAATTCG---GAGCTCGCCTCGAGGGCT 114202
| || |||||||| | ||||| | |||| || ||| ||||||| ||||
Sbjct 325752 TGGAAGGTCTCGTAGGCACCCTCCTCAATGGCCATCTCCATAGAG---GCCTCGACGGCT 325696
Query 114203 GCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAAC 114262
|||| || || ||||| || || | || | ||||||||||||||| |||||
Sbjct 325695 CCGTGGTAGATGGTCTCGAAGATCTGGATGTTGAGCTTCTTGGCCTCGTCGGACTCAAAG 325636
Query 114263 GCGAGTCGGCACA-AAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCG 114321
| ||| | ||| | || || ||| || ||||| |||||||| || | || || ||
Sbjct 325635 GGGAGAC-GCAGAGCCATGAAGGTATCAGCCAGACCCTGGACACCCAGAGCGATGGGTCG 325577
Query 114322 ATGTCTCATATTAGACTTTCGAGCGGTCTC---CACGGGATAAAAATTCCTATCGATAAC 114378
|||| ||| || ||||| || ||| ||||| || | || | ||||| |
Sbjct 325576 GTGTCGCATGTTGGACTT---CTTGGCCTCGGGAACGGGGTAGTAGTTTCGGTCGATGAT 325520
Query 114379 CCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATC--AAAA 114436
|| || ||| | ||||| | || ||||| ||||| | | | || | ||
Sbjct 325519 GGCGTTGAGGTTTCGCACAATGACCTTGGCAATATCATGCAGCTTCTTGAAGTCGTAGAA 325460
Query 114437 C-TGCGAGTCTCTTC---ATTGACATACTTAGGAAGGGCGATTGACGCCAGATTACACAC 114492
| | ||||| || | | || | | || || || || || ||||| || || ||
Sbjct 325459 CGAGTTGGTCTCGTCTCGAGTCACGAAAGTGGGCAGAGCAATGGAGGCCAGGTTGCAGAC 325400
Query 114493 AGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAAT 114552
| |||||| | || |||||| | ||| || ||||| || ||| ||| ||
Sbjct 325399 GGCAACCTCATCGGGAGAAGAGTACTCGACAATCTCGCAACACAGGTTGGAAGACTTGAT 325340
Query 114553 GGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGG 114612
||| |||| |||||| || || |||||| ||| || | |||||||| |||||| | ||
Sbjct 325339 GGTTCCCAGGTTCTTCTGGTTGGACTTTCGGTTGCAGGAGTCCTTGTAGAGCATGAAGGG 325280
Query 114613 CGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGA-CATCGGCGGCTGGCACAG 114671
| || | ||| || ||| | | |||||| | ||| | | || | ||| || | |
Sbjct 325279 GTTTCCGGACTCGGTCTGGCAGTCGAGAATGTGGTACCACAGCTTCTG-GGCGGGGATGG 325221
Query 114672 TGGCGTTGG-CTCGCCCCTCCTCCTCGTACTTTGTGTAGAGGGCTTC--AAACTCTTCAC 114728
| ||| || |||| ||||| |||||||| ||| | ||||| ||||| ||||
Sbjct 325220 T-TCGTCGGCCTCGTCCCTCTCGCTCGTACTGCTCGTACA--GCTTCTTGAACTCGTCAC 325164
Query 114729 CCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGACCATTGACCACCCT 114788
| | | || || || || || | ||||| | ||| | ||| | || ||
Sbjct 325163 CGTAGACGTCGTCAAGACCGGGGCACTCGTTGGGGCACATGAGGGTCCACTCGCCGTTCT 325104
Query 114789 CCTCAACACGCTTCATGAAGAGGTCTGGGATCCAGAGAGCTGAGAAGAGATCCCGACAGC 114848
||| || |||| |||||| ||||| || ||||| || || ||| || || || |
Sbjct 325103 GCTCGACTCGCTCCATGAACAGGTCGGGAATCCACAGGGCCAGGAACAGGTCTCGGGCTC 325044
Query 114849 GAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCC 114908
| || || | || || || |||| ||| | || || | ||| || ||||||
Sbjct 325043 GGATCTCCTCCTTTCCGTGGTTCTTTCGCAGCTCGCAGAACTCGAAGATGTCGTCGTGCC 324984
Query 114909 ACGGTTCCAGGTACACCGCGATTGACCCCTTACG---ACGACCAGCCTGGTTTACATACC 114965
| || || ||||||| || | | || || |||| |||||| || || |
Sbjct 324983 AAGGCTCAAGGTACATGGCAAAGGCTCCGGGTCGCTTGTTACCACCCTGGTCAACGTATC 324924
Query 114966 TCGCTGTGGCATTAAATACGCGAAGCATTGGAATGATACCATCAGATTGGCCATTTGTCC 115025
|| ||| || | || || ||||| || | |||||| | || || || || |
Sbjct 324923 GGGCAGTGTTGTTGTAGACTCGGAGCATGGGCACGATACCGTTGGAGGTACCGTTGGTGC 324864
Query 115026 CCCGAA--TACGAGACTTATTGGCTCTGACATCATGGATGTGCATACCAATACCCCCTGC 115083
| || || ||| | |||||| | | |||||| | ||| ||||| || ||
Sbjct 324863 CGGCAATGTAGGAGCC--GGTGGCTCGAATGTTGTGGATGGAGAGACCGATACCTCCGGC 324806
Query 115084 CCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCGTCGATCGAGTCACC 115143
|||| ||||| | || || | |||| | ||||||| |||||||| ||||| |
Sbjct 324805 AGACTTGGAGATGAGAGCACAGGTCTTGAGGGTATCGTAGATGCCGTCGATGGAGTCGTC 324746
Query 115144 CTTATTTGCGATAAGGAAGCAGCTCGACATTTGTGGCCTTGGTGTACCAGCGTTGAAGAG 115203
||| | || ||||| || ||||| || ||| || || ||||||||| ||||
Sbjct 324745 CTTCATGTTGACGAGGAAACACGAAGACATCTGGGGCTGGGGGGTTCCAGCGTTGTAGAG 324686
Query 115204 GGTTGGTGTCGCGTGGATGAACATACCT-TGGGACATCTTATCGTAGGTCTCCAAGACGG 115262
|| || | |||||| |||| ||| | |||||||| | | ||||||||| | | |
Sbjct 324685 AGTGGGGGAAGCGTGGGTGAA-GTACTTCTGGGACATGTAGTTGTAGGTCTCAATGGCCC 324627
Query 115263 CGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCGCATAAACATGTATTGGGGT 115318
|| ||||| || ||||| ||||||| ||||| ||||| | ||| | ||||||
Sbjct 324626 GGGCAATGTTGTCACCGTGGATACCGACAGAGACTCGCATGATCATCTGCTGGGGT 324571
>seq6
Length=2655350
Score = 107 bits (118), Expect = 2e-18
Identities = 203/292 (70%), Gaps = 14/292 (5%)
Strand=Plus/Minus
Query 126046 GGCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCC 126105
|||||| || ||| |||||||| || || || ||||| || || |||||| ||| ||
Sbjct 574907 GGCAAAGTCGGTGTGCAGACCCTCATCTCGAGAAATGAGCTCGTTGGAGAAGGTCAGGCC 574848
Query 126106 TGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGAT 126165
||||||||||| |||||||| | ||||||||| | ||| || || |||||||| ||
Sbjct 574847 AGGCATGAGACCTCGCTTCTTGAGCCAGAAAATGGAGGCAAAAGATCCGGAGAAGAAAAT 574788
Query 126166 TCCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGG-AG-CGCGACTTTGTGTCA 126223
||||| || || || || | || ||||| |||||| || | || | | |
Sbjct 574787 ACCCTCAACGGCAGCAAAGGCGATAAGTCGCTCGCCAAAGGTAGACTCGTCGT--CGGAG 574730
Query 126224 AACCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGC-TTC 126282
| |||||| | ||||| | ||||| |||| ||| || || | ||||| || || ||
Sbjct 574729 ATCCACTTGAGAGCCCAGTCGGCCTTCTTCTTGATGCAGGGAATGGTCTCAATGGCGTTG 574670
Query 126283 AA-AG---AGTTCCTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAG 126330
|| || ||||| || || || || |||||||| |||| |||||
Sbjct 574669 AACAGGTAAGTTCGCTCCTT-----GGGGTCCTTGATGTAAGTATCAATGAG 574623
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 597353458128520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |