Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yarrowia_20sp._20JCM_2030694_20[genbank_20GCA_5F001600515.1_202016- 03-01] 19 sequences; 21,758,297 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq2 215 6e-51 seq6 107 2e-18 >seq2 Length=4150472 Score = 215 bits (238), Expect = 6e-51 Identities = 1144/1796 (64%), Gaps = 61/1796 (3%) Strand=Plus/Minus Query 113558 TCAAGGCTGAACTGAATGGGTCTCGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTC 113617 |||| | ||||||| ||||| || ||| | | ||| ||||||||||| || ||| Sbjct 326340 TCAATGGTGAACTGGATGGGGGCAGCGGCAGCCATGGTTCGCAGGTAGTACATACCGGTC 326281 Query 113618 TTGAGCCCCTGCTTCCAGGCATACATATGCATCGAGGACAACTTGGAGAGTGTTGGACTT 113677 ||||| |||| ||||||| | || | ||||| || | | ||| | || ||| || Sbjct 326280 TTGAGACCCTTCTTCCAGCCGTAGAAGTGCATGGAAGTGAGCTTACCCA-TGGTGGGCT- 326223 Query 113678 TCCATGAAGAG---GTTCATACTTTGGGATTGATCGATGAAGCGTCCACGATCCGCCGCC 113734 || ||| | | ||| | ||||| || || |||||| | || || || ||| Sbjct 326222 -CCTTGATGTGAATGTTGAGGGACTGGGACTGGTCAATGAAGGGAGATCGGTCGGCGGCC 326164 Query 113735 ATATCAATCACATCCTTCATCTTGATTTCCCACACAGTTCTGTAGAGGTTCTTAATATCA 113794 || || || | |||| || |||||||| || |||| || | ||| || || Sbjct 326163 ATCTCGATGATTCGCTTCTGGGAAATCTCCCACACGGTCTTGTACAGCTCCTTGATCTCC 326104 Query 113795 TCTGGGATATCCACGATATTTTGGATGGAGCCACCCGCCTTGACCATGAGATCCTTCATA 113854 | ||||| | ||| || || | ||| || | ||| || | | ||||||| Sbjct 326103 TGGGGGATGTTGGGGATGTTCTGCACGGATCCGTTGTCGGCGACAATTCGGTTCTTCATA 326044 Query 113855 TCCTTTGACCAGAGACCAATCTTTTTGAGATCCTCCACGAGATGCTTA---TTGACAACA 113911 || ||||||||| | || || |||| |||| || ||||||| Sbjct 326043 GTCTCGTTCCAGAGACCGACCTCAACAAGGTCCTT---GAGAAGCCAGGGGTTGACAATC 325987 Query 113912 ACAAACTCACCCGCGAGGGTGCGTCTCAGA-TAGATATTGGTCGTGTATGGCTCAAAGCA 113970 |||||||| || || |||| ||| || || |||| ||||| ||||| ||||| Sbjct 325986 TGGAACTCACCGGCAAGAACTCGTCG-AGAGTAAATGTTGGAGGTGTAAGGCTCGAAGCA 325928 Query 113971 CTCATTGTTACCCAAGATTTGGGCGGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCT 114030 ||| ||| || | || || | ||| || || |||||||| || || | || || Sbjct 325927 CTCGTTGAAGCCGAGAATCTGAGAGGTAGAAGCAGTGGGCATAGGAGCGACCAGCAGAGA 325868 Query 114031 GTTACGGAGACCCTTTTCCCTAATGCGTTC--CTTGAGGGCGTCCCAGTCGTAGTTGAGC 114088 ||| || ||||| | | || | || ||||||| ||||||| || || ||| Sbjct 325867 GTTTCGCAGACCGTGCTTGACAA--CCTTGGACTTGAGGTCGTCCCACTCCCAG---AGC 325813 Query 114089 TTTGTCTCCC---CCTGCCACATATCAAACTGGAGGATACCTTGGGAGGCTGGCGATCCC 114145 | || | | |||||| || ||||| ||| || | |||||| || || ||| Sbjct 325812 TCGGTGGGGGAAACGTTCCACATGTCGAACTGCAGGTCTCCCTTGGAGGCAGGAGAGCCC 325753 Query 114146 TCAAATGTCTCGTATGGGCCCTCAACCTCCGCCAATTCG---GAGCTCGCCTCGAGGGCT 114202 | || |||||||| | ||||| | |||| || ||| ||||||| |||| Sbjct 325752 TGGAAGGTCTCGTAGGCACCCTCCTCAATGGCCATCTCCATAGAG---GCCTCGACGGCT 325696 Query 114203 GCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAAC 114262 |||| || || ||||| || || | || | ||||||||||||||| ||||| Sbjct 325695 CCGTGGTAGATGGTCTCGAAGATCTGGATGTTGAGCTTCTTGGCCTCGTCGGACTCAAAG 325636 Query 114263 GCGAGTCGGCACA-AAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCG 114321 | ||| | ||| | || || ||| || ||||| |||||||| || | || || || Sbjct 325635 GGGAGAC-GCAGAGCCATGAAGGTATCAGCCAGACCCTGGACACCCAGAGCGATGGGTCG 325577 Query 114322 ATGTCTCATATTAGACTTTCGAGCGGTCTC---CACGGGATAAAAATTCCTATCGATAAC 114378 |||| ||| || ||||| || ||| ||||| || | || | ||||| | Sbjct 325576 GTGTCGCATGTTGGACTT---CTTGGCCTCGGGAACGGGGTAGTAGTTTCGGTCGATGAT 325520 Query 114379 CCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATC--AAAA 114436 || || ||| | ||||| | || ||||| ||||| | | | || | || Sbjct 325519 GGCGTTGAGGTTTCGCACAATGACCTTGGCAATATCATGCAGCTTCTTGAAGTCGTAGAA 325460 Query 114437 C-TGCGAGTCTCTTC---ATTGACATACTTAGGAAGGGCGATTGACGCCAGATTACACAC 114492 | | ||||| || | | || | | || || || || || ||||| || || || Sbjct 325459 CGAGTTGGTCTCGTCTCGAGTCACGAAAGTGGGCAGAGCAATGGAGGCCAGGTTGCAGAC 325400 Query 114493 AGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAAT 114552 | |||||| | || |||||| | ||| || ||||| || ||| ||| || Sbjct 325399 GGCAACCTCATCGGGAGAAGAGTACTCGACAATCTCGCAACACAGGTTGGAAGACTTGAT 325340 Query 114553 GGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGG 114612 ||| |||| |||||| || || |||||| ||| || | |||||||| |||||| | || Sbjct 325339 GGTTCCCAGGTTCTTCTGGTTGGACTTTCGGTTGCAGGAGTCCTTGTAGAGCATGAAGGG 325280 Query 114613 CGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGA-CATCGGCGGCTGGCACAG 114671 | || | ||| || ||| | | |||||| | ||| | | || | ||| || | | Sbjct 325279 GTTTCCGGACTCGGTCTGGCAGTCGAGAATGTGGTACCACAGCTTCTG-GGCGGGGATGG 325221 Query 114672 TGGCGTTGG-CTCGCCCCTCCTCCTCGTACTTTGTGTAGAGGGCTTC--AAACTCTTCAC 114728 | ||| || |||| ||||| |||||||| ||| | ||||| ||||| |||| Sbjct 325220 T-TCGTCGGCCTCGTCCCTCTCGCTCGTACTGCTCGTACA--GCTTCTTGAACTCGTCAC 325164 Query 114729 CCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGACCATTGACCACCCT 114788 | | | || || || || || | ||||| | ||| | ||| | || || Sbjct 325163 CGTAGACGTCGTCAAGACCGGGGCACTCGTTGGGGCACATGAGGGTCCACTCGCCGTTCT 325104 Query 114789 CCTCAACACGCTTCATGAAGAGGTCTGGGATCCAGAGAGCTGAGAAGAGATCCCGACAGC 114848 ||| || |||| |||||| ||||| || ||||| || || ||| || || || | Sbjct 325103 GCTCGACTCGCTCCATGAACAGGTCGGGAATCCACAGGGCCAGGAACAGGTCTCGGGCTC 325044 Query 114849 GAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCC 114908 | || || | || || || |||| ||| | || || | ||| || |||||| Sbjct 325043 GGATCTCCTCCTTTCCGTGGTTCTTTCGCAGCTCGCAGAACTCGAAGATGTCGTCGTGCC 324984 Query 114909 ACGGTTCCAGGTACACCGCGATTGACCCCTTACG---ACGACCAGCCTGGTTTACATACC 114965 | || || ||||||| || | | || || |||| |||||| || || | Sbjct 324983 AAGGCTCAAGGTACATGGCAAAGGCTCCGGGTCGCTTGTTACCACCCTGGTCAACGTATC 324924 Query 114966 TCGCTGTGGCATTAAATACGCGAAGCATTGGAATGATACCATCAGATTGGCCATTTGTCC 115025 || ||| || | || || ||||| || | |||||| | || || || || | Sbjct 324923 GGGCAGTGTTGTTGTAGACTCGGAGCATGGGCACGATACCGTTGGAGGTACCGTTGGTGC 324864 Query 115026 CCCGAA--TACGAGACTTATTGGCTCTGACATCATGGATGTGCATACCAATACCCCCTGC 115083 | || || ||| | |||||| | | |||||| | ||| ||||| || || Sbjct 324863 CGGCAATGTAGGAGCC--GGTGGCTCGAATGTTGTGGATGGAGAGACCGATACCTCCGGC 324806 Query 115084 CCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCGTCGATCGAGTCACC 115143 |||| ||||| | || || | |||| | ||||||| |||||||| ||||| | Sbjct 324805 AGACTTGGAGATGAGAGCACAGGTCTTGAGGGTATCGTAGATGCCGTCGATGGAGTCGTC 324746 Query 115144 CTTATTTGCGATAAGGAAGCAGCTCGACATTTGTGGCCTTGGTGTACCAGCGTTGAAGAG 115203 ||| | || ||||| || ||||| || ||| || || ||||||||| |||| Sbjct 324745 CTTCATGTTGACGAGGAAACACGAAGACATCTGGGGCTGGGGGGTTCCAGCGTTGTAGAG 324686 Query 115204 GGTTGGTGTCGCGTGGATGAACATACCT-TGGGACATCTTATCGTAGGTCTCCAAGACGG 115262 || || | |||||| |||| ||| | |||||||| | | ||||||||| | | | Sbjct 324685 AGTGGGGGAAGCGTGGGTGAA-GTACTTCTGGGACATGTAGTTGTAGGTCTCAATGGCCC 324627 Query 115263 CGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCGCATAAACATGTATTGGGGT 115318 || ||||| || ||||| ||||||| ||||| ||||| | ||| | |||||| Sbjct 324626 GGGCAATGTTGTCACCGTGGATACCGACAGAGACTCGCATGATCATCTGCTGGGGT 324571 >seq6 Length=2655350 Score = 107 bits (118), Expect = 2e-18 Identities = 203/292 (70%), Gaps = 14/292 (5%) Strand=Plus/Minus Query 126046 GGCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCC 126105 |||||| || ||| |||||||| || || || ||||| || || |||||| ||| || Sbjct 574907 GGCAAAGTCGGTGTGCAGACCCTCATCTCGAGAAATGAGCTCGTTGGAGAAGGTCAGGCC 574848 Query 126106 TGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGAT 126165 ||||||||||| |||||||| | ||||||||| | ||| || || |||||||| || Sbjct 574847 AGGCATGAGACCTCGCTTCTTGAGCCAGAAAATGGAGGCAAAAGATCCGGAGAAGAAAAT 574788 Query 126166 TCCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGG-AG-CGCGACTTTGTGTCA 126223 ||||| || || || || | || ||||| |||||| || | || | | | Sbjct 574787 ACCCTCAACGGCAGCAAAGGCGATAAGTCGCTCGCCAAAGGTAGACTCGTCGT--CGGAG 574730 Query 126224 AACCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGC-TTC 126282 | |||||| | ||||| | ||||| |||| ||| || || | ||||| || || || Sbjct 574729 ATCCACTTGAGAGCCCAGTCGGCCTTCTTCTTGATGCAGGGAATGGTCTCAATGGCGTTG 574670 Query 126283 AA-AG---AGTTCCTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAG 126330 || || ||||| || || || || |||||||| |||| ||||| Sbjct 574669 AACAGGTAAGTTCGCTCCTT-----GGGGTCCTTGATGTAAGTATCAATGAG 574623 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597353458128520