Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yarrowia_20sp._20JCM_2030694_20[genbank_20GCA_5F001600515.1_202016- 03-01] 19 sequences; 21,758,297 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq2 396 3e-105 >seq2 Length=4150472 Score = 396 bits (438), Expect = 3e-105 Identities = 1217/1863 (65%), Gaps = 48/1863 (3%) Strand=Plus/Plus Query 93718 TACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCT-CAAGATGGATGGCAG 93776 ||| | ||||||| |||||| || |||||| | ||||| || | || | | || Sbjct 324500 TACAACTACTTTGGCTTCAAGACCCTGGAGCGAGCATACCTGCTTCGAG-TCAACGGAGC 324558 Query 93777 GGTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCACGA 93836 ||| |||||||||| || ||| || | ||||| ||| | |||| || ||||| || | Sbjct 324559 TGTTGCCGAGCGACCCCAGCAGATGATCATGCGAGTCTCTGTCGGTATCCACGGTGACAA 324618 Query 93837 CAT-GCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATACCATGGCCA 93895 ||| ||| ||| | || || ||||| | ||| | ||| || Sbjct 324619 CATTGCCCGGGCCATTGAGACCTA-CAACTACATGTCCCAGAAGTACTTCACCCACGCTT 324677 Query 93896 CCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGATGA 93955 |||| || || | |||||| || ||||| ||| |||||||||||||||||||| | | Sbjct 324678 CCCCCACTCTCTACAACGCTGGAACCCCCCAGCCCCAGATGTCTTCGTGTTTCCTCGTCA 324737 Query 93956 CGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATCT 94015 | |||| |||||||||| ||| || | ||| | ||||||| |||||| ||||| Sbjct 324738 ACATGAAGGACGACTCCATCGACGGCATCTACGATACCCTCAAGACCTGTGCTCTCATCT 324797 Query 94016 CAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTACA 94075 | || | || || || ||||| || ||||| || | || |||| || ||||||| Sbjct 324798 CCAAGTCTGCCGGAGGTATCGGTCTCTCCATCCACAACATTCGAGCCACCGGCTCCTACA 324857 Query 94076 TCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACG 94135 | ||| ||||| || ||||||||||| |||| || |||||||| |||| ||||||| Sbjct 324858 TTGCCGGCACCAACGGTACCTCCAACGGTATCGTGCCCATGCTCCGAGTCTACAACAACA 324917 Query 94136 CGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCG 94195 | || || ||||| |||||||||||| | | | || | || || | || || | Sbjct 324918 CTGCCCGATACGTTGACCAGGGTGGTAACAAGCGACCCGGAGCCTTTGCCATGTACCTTG 324977 Query 94196 AGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGATC 94255 |||| ||||||| ||| | | ||| ||| ||||||||||||||||| || || Sbjct 324978 AGCCTTGGCACGACGACATCTTCGAGTTCTGCGAGCTGCGAAAGAACCACGGAAAGGA-- 325035 Query 94256 TGGAGA---GGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAAC 94312 ||||| | ||| ||||||| ||| || || ||| | || ||||| || ||| | | Sbjct 325036 -GGAGATCCGAGCCCGAGACCTGTTCCTGGCCCTGTGGATTCCCGACCTGTTCATGGAGC 325094 Query 94313 GCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCG 94372 | |||||| | ||| || |||| || | || ||||| || || ||||| || || Sbjct 325095 GAGTCGAGCAGAACGGCGAGTGGACCCTCATGTGCCCCAACGAGTGCCCCGGTCTTGACG 325154 Query 94373 ACGTTTGTGGATCGCGTTTTGAAG-ACTTGTATGCTCGTTACGAATCGCAGGG-CAAGGC 94430 |||| | || | || || ||| | |||| | | ||||| |||| | |||| Sbjct 325155 ACGTCTACGG-TGACGAGTTCAAGAAGCTGTACGAGCAGTACGAGCGAGAGGGACGAGGC 325213 Query 94431 C-AGGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGA 94489 | | ||| || || |||||||||| | || || | ||| ||| ||| Sbjct 325214 CGACGAA--CCATCCCCGCCCAGAAGCTGTGGTACCACATTCTCGACTGCCAGACCGAGT 325271 Query 94490 CGGGTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCACC 94549 | || | |||| ||| | | ||||||||| |||| |||||||||||| || ||| Sbjct 325272 CCGGAAACCCCTTCATGCTCTACAAGGACTCCTGCAACCGAAAGTCCAACCAGAAGAACC 325331 Query 94550 TCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACG 94609 | || |||||| || || ||||| ||||||||||||||| ||||||| || | Sbjct 325332 TGGGAACCATCAAGTCTTCCAACCTGTGTTGCGAGATTGTCGAGTACTCTTCTCCCGATG 325391 Query 94610 AGATTGCTGTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTCGTG---CGAGATGCCT 94666 || |||| || || ||||||| |||||| ||| ||||||||||| ||||| | Sbjct 325392 AGGTTGCCGTCTGCAACCTGGCCTCCATTGCTCTGCCCACTTTCGTGACTCGAGA---CG 325448 Query 94667 ACACGTCTACTGCTTCGTTCGATCTGGAGGAGCT-TGTGAACTTCGCGGGAAGG--ATGG 94723 | || | ||| ||| | ||| | || |||| ||| || | |||| || | Sbjct 325449 AGAC--CAACTCGTTC-TACGACTTCAAGAAGCTGCATGATATT---GCCAAGGTCATTG 325502 Query 94724 TCTTGAACCTGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGGCGGAGAACT 94783 | ||||| ||| | |||||| |||| ||||||||| || ||||| |||| | Sbjct 325503 TGCGAAACCTCAACGCCATCATCGACCGAAACTACTACCCCGTTCCCGAGGCCAAGAAGT 325562 Query 94784 CAAACCTGAAGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCGCTGGTGA 94843 | ||| || || || ||||||| | || ||||||||| | || || | | || Sbjct 325563 CCAACATGCGACACCGACCCATCGCTCTGGGTGTCCAGGGTCTGGCTGATACCTTCATGG 325622 Query 94844 TGATGCGTCTGCCCTACGACTCTGTCGACGCGGCGGGTTTGAATTTGAACATATTCGAAA 94903 ||||||| |||| || || | ||| || | | || | | || ||||| | Sbjct 325623 CTCTGCGTCTCCCCTTTGAGTCCGACGAGGCCAAGAAGCTCAACATCCAGATCTTCGAGA 325682 Query 94904 GCATTTATTACGGGGCCATGAAACAATCCGTCCACTTGGCCAGATCGGACGGCGGGCCAC 94963 ||| || |||| ||| | | || | | |||||| ||| || | | Sbjct 325683 CCATCTACCACGGAGCCGTCGAGGCCTCTATGGAGATGGCCATTGAGGAGGGTG---CCT 325739 Query 94964 ACGAATCGTTCCGCGGATCGCC--CTTGGAACAGGGCATTTTTCAGTTCGACCTCTGGGG 95021 |||| | |||| || || || | | | |||| | ||||||||| | ||| Sbjct 325740 ACGAGACCTTCCAGGGCTCTCCTGCCTCCA--AGGGAGACCTGCAGTTCGACATGTGGAA 325797 Query 95022 TGTGAAGCCCTCGGGTCTGTACGACTGGGAAGCTCTACGCGCTGATGTTATCAAACACGG 95081 || ||| | | || | || ||||| | || | | ||| |||| ||||| Sbjct 325798 CGTTTCCCCCACCGAGCTCTGGGAGTGGGACGACCTCAAGTCCAAGGTTGTCAAGCACGG 325857 Query 95082 TGTGAAAAACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTGG 95141 | || |||| | ||||| || || || |||||||| || || || | ||||| || || Sbjct 325858 TCTGCGAAACTCTCTGCTGGTCGCTCCTATGCCCACTGCTTCTACCTCTCAGATTCTCGG 325917 Query 95142 CAACAACGAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCCGG 95201 | |||||||| ||||| || | |||||||||| | ||| | || || || ||||| Sbjct 325918 CTTCAACGAGTGCTTCGAGCCTTACACCTCCAACATTTACTCTCGACGAGTTCTTGCCGG 325977 Query 95202 GGAATTCCCCGTCATCAACAAGCACCTCCTACGGGACC----TGACGTCTCTGGGTGTGT 95257 || |||| | ||||| || || ||||| ||| ||| ||| | | Sbjct 325978 TGAGTTCCAGATTGTCAACCCCTGGCTTCTCAAGGACCTTGTTGAGGTC----GGTCTCT 326033 Query 95258 GGGGTGACAAGGTCAAGAACCAACTGCTACGCGCCAACGGCTCCGTCCAGAACATCCCGC 95317 || || | | ||||||| | | | || |||||| ||||| ||||||||||| Sbjct 326034 GGAACGAGACTATGAAGAACCGAATTGTCGCCGACAACGGATCCGTGCAGAACATCCCCA 326093 Query 95318 AAATACCGGAGGACATCAAGGCGCTCTACAAGACCGTGTGGGAGATCCCGCAG-CGCGTG 95376 | || || |||| ||||||| ||| |||||||||||||||||||| | ||| ||| Sbjct 326094 ACATCCCCCAGGAGATCAAGGAGCTGTACAAGACCGTGTGGGAGATTTCCCAGAAGCG-A 326152 Query 95377 ATACTCGACCACGCGGCCGCCCGCGGGCCCTTCATCTGCCAGAGNNNNNNNNNNNNNNNN 95436 || |||| || |||| ||| |||||||| |||| Sbjct 326153 ATCATCGAGATGGCCGCCGACCGATCTCCCTTCATTGACCAGTCCCAGTCCCTCAACATT 326212 Query 95437 NNNATGGCCGAGCCCAGTCGCGGAAAAATAACGTCCATGTTGTTCTACGGGTGGAGAAAG 95496 || ||||||| || || | || |||||| |||||||| |||| ||| Sbjct 326213 CACATCAAGGAGCCCACCATGGGTAAGCTCACTTCCATGCACTTCTACGGCTGGAAGAAG 326272 Query 95497 GGTCTCAAGACCGGTATGTATTATTTGCGAACCAGGCCAAAGGCGGACTCCATACAGTTC 95556 |||||||||||||||||||| || ||||||||| | | || | | |||| |||||| Sbjct 326273 GGTCTCAAGACCGGTATGTACTACCTGCGAACCATGGCTGCCGCTGCCCCCATCCAGTTC 326332 Query 95557 GCC 95559 || Sbjct 326333 ACC 326335 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494723082503240