Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20sp._20JCM_2030694_20[genbank_20GCA_5F001600515.1_202016-
03-01] 19 sequences; 21,758,297 total letters
Query= NC_013288.1
Length=191761
Score E
Sequences producing significant alignments: (Bits) Value
seq6 123 3e-23
>seq6
Length=2655350
Score = 123 bits (136), Expect = 3e-23
Identities = 378/572 (66%), Gaps = 18/572 (3%)
Strand=Plus/Minus
Query 127241 ACCCGCTTCTCGAAGAAGTTTGTCTTCCCATCGAGGCTGATATTCTCCATAAAATCAAAT 127300
|| ||||||||||||||||| ||||| ||| | || || |||||||| || |||||
Sbjct 575185 ACTCGCTTCTCGAAGAAGTTGGTCTTTCCAGCCAGAGAAATGTTCTCCATGAAGTCAAAG 575126
Query 127301 GGGTTCTTTGAGTTCCAAATTGTTGGCACCCCAATCTGTTTGAGGAGACGATCCGAGACG 127360
||||| | ||||| | | | || |||| || ||||| || | ||
Sbjct 575125 GGGTTGGTGGAGTTGTAGACCTTGGGGTTTCCAAGAGCAACAAGCAGACGGTCGGCCACA 575066
Query 127361 TACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAGGTTACATGGGAGCGCG 127420
|||||||||||| ||| || | ||||||||||| || ||| ||||| ||
Sbjct 575065 AACTCAATGTACTGTCGCATGAGCTTGGCGTTCATACCGAGCAGACCACAAGGGAGAGCA 575006
Query 127421 TCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGTACGATGGCGTGAATAGTGTCC 127480
|| | |||| ||| ||||||| | ||||| || | || | | | | | | | |
Sbjct 575005 TCAGTAAGGAACTCCTGCTCAATGCCAACAGCCTCGACAATGACGTCCTCGACAATCTTC 574946
Query 127481 ACCCCAGGTCTATTGCGTAAAGTCTT-GAAGAGTTCCACAG-CAAACTCTTGGTGGAGAC 127538
|||| || | | || |||||| |||| |||| || ||| ||||
Sbjct 574945 TTGGAGGGTCGGTT-CTCGAGGTGAGAGAAGAGCAG-ACAGGCAAAGTCGGTGTGCAGAC 574888
Query 127539 CCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCCCGCTTCT 127598
|||| || || || ||||| || || |||||| ||| || ||||||||||| |||||||
Sbjct 574887 CCTCATCTCGAGAAATGAGCTCGTTGGAGAAGGTCAGGCCAGGCATGAGACCTCGCTTCT 574828
Query 127599 TCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACACGCGAACG 127658
| | ||||||||| | ||| || || |||||||| || ||||| || || || |
Sbjct 574827 TGAGCCAGAAAATGGAGGCAAAAGATCCGGAGAAGAAAATACCCTCAACGGCAGCAAAGG 574768
Query 127659 CAAATAGACGCTCGGCAAAGG-AG-CGGGACTTTGTATCAAACCACTTCATCGCCCACTG 127716
| | || |||||| |||||| || | | | | | | | |||||| | ||||| |
Sbjct 574767 CGATAAGTCGCTCGCCAAAGGTAGACTCGTCGTCGGA--GATCCACTTGAGAGCCCAGTC 574710
Query 127717 TGCCTTTTTCTCGATACATGGGACGGTCTGGATCGC-TTCAA-AG---AGTTCCTTCTTT 127771
||||| |||| ||| || || | ||||| || || || || || ||||| || ||
Sbjct 574709 GGCCTTCTTCTTGATGCAGGGAATGGTCTCAATGGCGTTGAACAGGTAAGTTCGCTCCTT 574650
Query 127772 TCTGATGGATCTTTGATGTACTTATCTATGAG 127803
|| || |||||||| |||| |||||
Sbjct 574649 -----GGGGTCCTTGATGTAAGTATCAATGAG 574623
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 613507054292040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |