Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20sp._20JCM_2030694_20[genbank_20GCA_5F001600515.1_202016-
03-01] 19 sequences; 21,758,297 total letters
Query= NC_013668.3
Length=248526
Score E
Sequences producing significant alignments: (Bits) Value
seq6 221 2e-52
seq2 210 3e-49
>seq6
Length=2655350
Score = 221 bits (244), Expect = 2e-52
Identities = 562/848 (66%), Gaps = 13/848 (2%)
Strand=Plus/Minus
Query 159628 CTTCTTGTATTGCGACACATTCTTCTCGAAAAAGTTGGTCTTGCCCTCCATGGATATTGA 159687
||||| ||| | ||||| ||||||||| ||||||||||| || ||| || ||
Sbjct 575201 CTTCTGGTAGTCAGACACTCGCTTCTCGAAGAAGTTGGTCTTTCCAGCCAGAGAAATGTT 575142
Query 159688 TTCCATGAACCCGAATGGGTTCTTCACGTGATAGCGCTTCGGAAATCCGAGAGCCGCCAG 159747
|||||||| | || ||||| | || ||| ||| || ||| ||||| | ||
Sbjct 575141 CTCCATGAAGTCAAAGGGGTTGGTGGAGTTGTAGACCTTGGGGTTTCCAAGAGCAACAAG 575082
Query 159748 CAACCTGTCTGCCACAAATTCGATGTAGCTACACATCTGCTCACAGTTGATCCCCAGCAG 159807
|| | ||| |||||||| || ||||| | ||| ||| ||| || || |||||
Sbjct 575081 CAGACGGTCGGCCACAAACTCAATGTACTGTCGCATGAGCTTGGCGTTCATACCGAGCAG 575022
Query 159808 CCTAACGGGGAGCGCTTCCGACAGAAACTCCTTCTCAATCTCGACCGCTTCGGTCACAAT 159867
| | ||||| || || | || ||||||| |||||| | || || ||| |||||
Sbjct 575021 ACCACAAGGGAGAGCATCAGTAAGGAACTCCTGCTCAATGCCAACAGCCTCG---ACAAT 574965
Query 159868 C---TGCGAGACACGTTCGTACCCCGGCTTGCCCAAAAT-GTGGTCCTTAAACAGGAGGC 159923
| | |||| || | | || | | | | ||| || || || |
Sbjct 574964 GACGTCCTCGACAA--TCTT--CTTGGAGGGTCGGTTCTCGAGGTGAGAGAAGAGCAGAC 574909
Query 159924 ACGCAAAGTCGCAGTGCAGTCCCTCGTCCCGAGAGATGAACTCGTTGGACATGATGAGGC 159983
| ||||||||| |||||| ||||| || ||||| |||| ||||||||| | | | ||||
Sbjct 574908 AGGCAAAGTCGGTGTGCAGACCCTCATCTCGAGAAATGAGCTCGTTGGAGAAGGTCAGGC 574849
Query 159984 CCGGCATGATCCCACGCGGTTTGAGCCAAAAAATGGCCGCAAAAGCACCGCTAAAAAAGA 160043
| ||||||| || ||| |||||||| ||||||| ||||||| ||| || || |
Sbjct 574848 CAGGCATGAGACCTCGCTTCTTGAGCCAGAAAATGGAGGCAAAAGATCCGGAGAAGAAAA 574789
Query 160044 TCCCCTCCACGGCCGCAAACGCCACGAGCCTCTCACCAAAAGAGGCGTTGGTGTCATGGG 160103
| ||||| ||||| ||||| || | || | ||| ||||| | | | | ||| |
Sbjct 574788 TACCCTCAACGGCAGCAAAGGCGATAAGTCGCTCGCCAAAGGTAGACTCGTCGTCGGAGA 574729
Query 160104 TCCACCTTTTGGCCCATTCAGCCTTCTTTGCGATGCACGGCATGCGCTCGACGGCGTTAA 160163
||||| | ||||| || |||||||| |||||| || ||| ||| | |||||| |
Sbjct 574728 TCCACTTGAGAGCCCAGTCGGCCTTCTTCTTGATGCAGGGAATGGTCTCAATGGCGTTGA 574669
Query 160164 ACAA-TCTGTCCTGCTCCTTCACATCCTTGATCAGAGTAGCAATCAGCTTCGAGTACATT 160222
||| | || | ||||||| |||||||| |||| |||| ||| ||||| |
Sbjct 574668 ACAGGTAAGTTC-GCTCCTTGGGGTCCTTGATGTAAGTATCAATGAGCAGAGAGTAGGTC 574610
Query 160223 TCTGCGTGCACATTTTCGATGGCCATCTGAAAGTTGTAGAAATATGTCGCCTCCAGATAC 160282
|| | || | || || || ||||| || |||||| | | ||||| || |
Sbjct 574609 TCGGAATGGATGTTCTCCATCATGATCTGGAATCCGTAGAAGCACTTGGCCTCAGGAGCC 574550
Query 160283 TGCACCTCCTGTGTGAACCTTTGACCCAGATTGGCATTAACCAACCCGTCGGCGGCCGCA 160342
|| ||||| | ||||| | | |||| || | || || | ||||| | ||| |||
Sbjct 574549 TGAACCTCTCCAGAGAACCGCTCAACCAGGTTCTCGTTGACAATACCGTCAGAGGCAGCA 574490
Query 160343 AAGAAAGCCAACACGTGAGAGATGAAATGTCTCTCGTCTTTGTTGAGTCTCTTTTCCCAG 160402
|||||||||| |||||| || |||||| ||||||| ||||||| | || ||||||
Sbjct 574489 AAGAAAGCCAGCACGTGCGAAATGAAAAACTTCTCGTCGCTGTTGAGCCGGTTCTCCCAG 574430
Query 160403 TGTGTCACGTCTTGGGCCAAATCAACCTCTTCCGCGCTCCAATTGGCAGCCTGAGCAGTT 160462
| || || | | | | ||||| ||| || ||| |||| | ||||| || |
Sbjct 574429 TCGCCCATATCCTTGCCGAGATCAATCTCCTCGGCGGTCCAGAAAGAAGCCTCGGCCTTC 574370
Query 160463 TTGTACAT 160470
||||||||
Sbjct 574369 TTGTACAT 574362
>seq2
Length=4150472
Score = 210 bits (232), Expect = 3e-49
Identities = 342/486 (70%), Gaps = 10/486 (2%)
Strand=Plus/Minus
Query 203849 GTGAACTGAATGGCGTTCACGGCAGGCCTGCTTCTCAGATAGTACATGCCGGTCTTTAGG 203908
|||||||| |||| | |||||| | || ||| ||| |||||||| |||||||| ||
Sbjct 326334 GTGAACTGGATGGGGGCAGCGGCAGCCATGGTTCGCAGGTAGTACATACCGGTCTTGAGA 326275
Query 203909 CCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGGGGTCGGCCATG 203968
||||||| ||| ||||| | ||||||||||| || || | || | |||| || |||
Sbjct 326274 CCCTTCTTCCAGCCGTAGAAGTGCATGGAAGTGAGCTTACCCATGGTGGGCTCCTTGATG 326215
Query 203969 TGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCCCGATCTGCGGCCATATTGATA 204028
|||||||| || |||||| ||||| ||||| || | || || |||||||| | |||
Sbjct 326214 TGAATGTTGAGGGACTGGGACTGGTCAATGAAGGGAGATCGGTCGGCGGCCATCTCGATG 326155
Query 204029 ATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACACGTCTCTGGTGTGTTGAGGCACA 204088
|| |||||| |||||||||||||| |||||| ||| || || | | || || |
Sbjct 326154 ATTCGCTTCTGGGAAATCTCCCACACGGTCTTGTACAGCTCCTTGATCTCCTGGGGGATG 326095
Query 204089 TCTTCCCACGTCCTG-ATCGAGCCGTTGTCGGCCATCAGTC---TCATCCTCGTCTCCTC 204144
| | | || ||| | || ||||||||||| | | || || || | ||||| |
Sbjct 326094 T-TGGGGATGTTCTGCACGGATCCGTTGTCGGCGACAATTCGGTTCTTCATAGTCTCGT- 326037
Query 204145 CCCCCACATGCCCAACCTGATC-AGCTCCCGCACCAGGTGGGGGTTGATGATCTGAAAGT 204203
||| | | || |||| | | || ||| | || |||||||| ||||| || |
Sbjct 326036 --TCCAGA-GACCGACCTCAACAAGGTCCTTGAGAAGCCAGGGGTTGACAATCTGGAACT 325980
Query 204204 CTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGAACGCCTCGTTGT 204263
| |||| || || | ||| | | | | |||| |||| | || ||||| |||||||
Sbjct 325979 CACCGGCAAGAACTCGTCGAGAGTAAATGTTGGAGGTGTAAGGCTCGAAGCACTCGTTGA 325920
Query 204264 TGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCAGGGAGTTGCGCA 204323
||||| |||||||| ||| || |||||||| ||||| | ||||| ||||| ||||
Sbjct 325919 AGCCGAGAATCTGAGAGGTAGAAGCAGTGGGCATAGGAGCGACCAGCAGAGAGTTTCGCA 325860
Query 204324 CACCGT 204329
|||||
Sbjct 325859 GACCGT 325854
Score = 181 bits (200), Expect = 2e-40
Identities = 565/855 (66%), Gaps = 20/855 (2%)
Strand=Plus/Minus
Query 204923 cccACATGCTGCTGGTTAGACTTGCGGTTACAGGAGTCCTTGTACATCATGAACGGCATT 204982
|||| | || |||||| ||||| ||||| |||||||||||||| | |||||| || ||
Sbjct 325335 CCCAGGTTCTTCTGGTTGGACTTTCGGTTGCAGGAGTCCTTGTAGAGCATGAAGGGGTTT 325276
Query 204983 CCGTTCTCCATCTGAGA-TCGCAGAATGTGGGTCCACAATTCGCGAGCCTCCACTTGCTT 205041
||| ||| |||| | ||| ||||||||| ||||| | | || | || ||
Sbjct 325275 CCGGACTCGGTCTGGCAGTCG-AGAATGTGGTACCACAGCTTCTGGGCGGGGA--TGGTT 325219
Query 205042 CA-CGTACA--TCCCTTGAGACTCGTATTTTGTGTACAGCGCCACAAAGTCAGAACCGTA 205098
| || | ||||| | |||||| | ||||||| | || || ||||||
Sbjct 325218 CGTCGGCCTCGTCCCTCTCG-CTCGTACTGCTCGTACAGCTTCTTGAACTCGTCACCGTA 325160
Query 205099 CACGTCCATCAGCCCTGGACATTTTTTGGGACACATCAGAGACCACAT-CTGATCGTCTT 205157
||||| || || || || | ||||| ||||| || | |||| | | || ||
Sbjct 325159 GACGTCGTCAAGACCGGGGCACTCGTTGGGGCACATGAGGGTCCACTCGCCGTTCTGCTC 325100
Query 205158 TCACCCTCTCCATAAACAGGTCGCTGATCCACAGGCCGTAAAACAGATCACGGGCCCTAA 205217
|| | |||||| ||||||||| ||||||||| | ||||| || ||||| | |
Sbjct 325099 G-ACTCGCTCCATGAACAGGTCGGGAATCCACAGGGCCAGGAACAGGTCTCGGGCTCGGA 325041
Query 205218 TTCCGTCGTCTCCAAGGTTCTTTTTCAAGTC-CAGCCAAGCCGCA-ATGTCGGCGTGCCA 205275
| | || | ||| |||||||| || || ||| || || | |||||| |||||||
Sbjct 325040 TCTCCTCCTTTCCGTGGTTCTTTCGCAGCTCGCAG--AACTCGAAGATGTCGTCGTGCCA 324983
Query 205276 CGGCTCTAACCACACGGCCATTGCGCCTGGCCTCTTGTTCCCACCCTGGTCCACCATGCG 205335
||||| | ||| ||| | || || || | |||||| ||||||||||| || ||
Sbjct 324982 AGGCTCAAGGTACATGGCAAAGGCTCCGGGTCGCTTGTTACCACCCTGGTCAACGTATCG 324923
Query 205336 AGTCATCGCGTTGAAAACTCGCAGCATCGGCACCAGACCGTTGGCGGTCCCGTTCGTGCT 205395
| | |||| | ||||| ||||| ||||| | |||||||| ||| ||||| ||||
Sbjct 324922 GGCAGTGTTGTTGTAGACTCGGAGCATGGGCACGATACCGTTGGAGGTACCGTTGGTGCC 324863
Query 205396 GTTGATGGCCGAGCCTTCAGCCCTCACGTTGGAGATGGCCGCGCCAATCCCGCCAGAACA 205455
| ||| ||||| || | | |||| ||||| || || || || | | |
Sbjct 324862 GGCAATGTAGGAGCCGGTGGCTCGAATGTTGTGGATGGAGAGACCGATACCTCCGGCAGA 324803
Query 205456 CTTGGCGATCTGGGCGCA-CTCTTGCAGAGTGCTGTAGATGCCTGCGATGGAATCGTCCG 205514
||||| ||| | || || ||||| || || ||||||||| ||||||| ||||||
Sbjct 324802 CTTGGAGATGAGAGCACAGGTCTTG-AGGGTATCGTAGATGCCGTCGATGGAGTCGTCCT 324744
Query 205515 CCAGTGTCACCAGATAGCACGAAGCCAGCTTGGCAAAGTTGGTGCCCGCGTGGAAGAGCG 205574
|| | || || | ||||||| || || || | ||| || |||| | |||| |
Sbjct 324743 TCATGTTGACGAGGAAACACGAAGACATCTGGGGCTGGGGGGTTCCAGCGTTGTAGAGAG 324684
Query 205575 TGGGGCTGGCGTGGCTGAAGCGCTTCTCGCTCAAACACCTGTAGGTCTCCAGCACGCTCT 205634
||||| |||||| ||||| ||||| | || | |||||||||| | | |
Sbjct 324683 TGGGGGAAGCGTGGGTGAAGTACTTCTGGGACATGTAGTTGTAGGTCTCAATGGCCCGGG 324624
Query 205635 CCAGATCGAAGCCGTGAATACCTATGGCGATCCTCATGAAGAGGTGTTGAGGTCTCTC-- 205692
| | | | ||||| ||||| | | || | ||||| | || || |||| |||
Sbjct 324623 CAATGTTGTCACCGTGGATACCGACAGAGACTCGCATGATCATCTGCTGGGGTCGCTCGG 324564
Query 205693 CATCACCCTCTCGTTCACCTTGAGCAGATAGGCTCTCTCTAGGGTGCGGATGGCAAAAAA 205752
|| || ||| |||| || ||||| || |||| ||| ||||| || | |||| |
Sbjct 324563 CAACA-GCTC-CGTTGACTCGAAGCAGGTATGCTCGCTCCAGGGTCTTGAAGCCAAAGTA 324506
Query 205753 GTTGAAGGTGTAGTC 205767
|||| ||||| ||||
Sbjct 324505 GTTGTAGGTGAAGTC 324491
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 795155011150640
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