Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20sp._20JCM_2030694_20[genbank_20GCA_5F001600515.1_202016-
03-01] 19 sequences; 21,758,297 total letters
Query= NC_013756.1
Length=368454
Score E
Sequences producing significant alignments: (Bits) Value
seq1 156 1e-32
seq2 147 5e-30
>seq1
Length=4845111
Score = 156 bits (172), Expect = 1e-32
Identities = 166/219 (76%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 199408 TCGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGT 199467
|||||||| ||||| || |||||||| |||||||| |||| ||||||||| | || |||
Sbjct 2007187 TCGAAGTCGAAGGACCAGATGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGGACAGAGT 2007246
Query 199468 CCTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCC 199527
| ||||||||| |||||||| || ||||| ||||| |||||||||||||| ||||||
Sbjct 2007247 TCGTCCATCTTCGAGCTGCTTACCAGCGAAAATGAGTCGCTGCTGGTCCGGGGGAATTCC 2007306
Query 199528 TTCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAA 199587
|| ||||||||||| ||| || || | |||||| | | || || || |
Sbjct 2007307 CTCCTTGTCCTGAATCTTGGACTTGACATTGTCAATGGTGTCGGAGGACTCGACCTCAAG 2007366
Query 199588 CGTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|| || ||||| || ||||| || ||||| ||||| ||
Sbjct 2007367 GGTAATGGTCTTTCCAGTGAGGGTCTTCACGAAAATCTG 2007405
Score = 152 bits (168), Expect = 1e-31
Identities = 165/219 (75%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 199408 TCGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGT 199467
|||||||| ||||| || || || || |||||||| |||| |||||| |||| || |||
Sbjct 2006959 TCGAAGTCGGAGGACGAGATGAAGGGTGGACTCCTTCTGGATGTTGTAATCAGACAGAGT 2007018
Query 199468 CCTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCC 199527
| |||||| || |||||||| ||||||||||| || |||||||||||||| ||||||
Sbjct 2007019 TCGTCCATCCTCAAGCTGCTTACCGGCGAAGATAAGTCGCTGCTGGTCCGGGGGAATTCC 2007078
Query 199528 TTCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAA 199587
|| ||||||||||| ||| ||| || | |||||| | | || || || |
Sbjct 2007079 CTCCTTGTCCTGAATCTTAGACTTGACGTTGTCAATGGTGTCAGAAGACTCAACCTCGAG 2007138
Query 199588 CGTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
||||| ||||| || || ||||| || ||||| || ||
Sbjct 2007139 GGTGATGGTCTTTCCAGTCAGAGTCTTGACAAAGATCTG 2007177
Score = 138 bits (152), Expect = 3e-27
Identities = 162/219 (74%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 199408 TCGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGT 199467
||| |||| |||||||| || || || |||||||| |||| ||||||||||| || |||
Sbjct 2007415 TCGGAGTCGGAGGACAAGATGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGACAGAGT 2007474
Query 199468 CCTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCC 199527
| ||| || || ||||||||||| ||||| ||||| |||||||||||||| |||||
Sbjct 2007475 TCGTCCGTCCTCAAGCTGCTTTCCAGCGAAAATGAGTCGCTGCTGGTCCGGGGGGATTCC 2007534
Query 199528 TTCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAA 199587
|| ||||||||||| ||| ||| || | |||||| | | || || || |
Sbjct 2007535 CTCCTTGTCCTGAATCTTGGACTTGACGTTGTCAATGGTGTCAGAAGACTCGACCTCAAG 2007594
Query 199588 CGTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
||||| ||||| || || || || || || || || ||
Sbjct 2007595 GGTGATAGTCTTGCCGGTCAGGGTCTTGACGAAGATCTG 2007633
Score = 129 bits (142), Expect = 1e-24
Identities = 160/219 (73%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 199408 TCGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGT 199467
||| |||| || |||||||||||||| || ||||| |||| ||| ||||||| | ||
Sbjct 2006536 TCGGAGTCGGAGCACAAGGTGGAGAGTGGATTCCTTCTGGATGTTATAGTCAGAAAGGGT 2006595
Query 199468 CCTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCC 199527
| ||| || || |||||||| ||||||||||| || |||||||||||||| || ||
Sbjct 2006596 TCGTCCGTCCTCAAGCTGCTTACCGGCGAAGATAAGTCGCTGCTGGTCCGGGGGGATACC 2006655
Query 199528 TTCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAA 199587
|| ||||| ||||| ||| ||| || | |||||| | | || || || |
Sbjct 2006656 CTCCTTGTCCTGGATCTTGGACTTGACGTTGTCAATGGTGTCGGAGGACTCAACCTCAAG 2006715
Query 199588 CGTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
||||| ||||| || || ||||| || ||||| || ||
Sbjct 2006716 AGTGATAGTCTTTCCAGTCAGAGTCTTGACAAAGATCTG 2006754
Score = 114 bits (126), Expect = 3e-20
Identities = 108/138 (78%), Gaps = 0/138 (0%)
Strand=Plus/Plus
Query 199408 TCGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGT 199467
||| |||| ||||| || |||||||| |||||||| || | ||||||||| | | ||
Sbjct 2007643 TCGGAGTCGGAGGACCAGATGGAGAGTGGACTCCTTCTGAATGTTGTAGTCGGAGAGGGT 2007702
Query 199468 CCTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCC 199527
| ||||| || ||||||||||| ||||||||||| |||||||||||||| |||||
Sbjct 2007703 TCGGCCATCCTCAAGCTGCTTTCCAGCGAAGATGAGTCGCTGCTGGTCCGGGGGGATTCC 2007762
Query 199528 TTCTCGCTCCTGAATCTT 199545
|| |||||||||||
Sbjct 2007763 CTCCTTGTCCTGAATCTT 2007780
Score = 89.7 bits (98), Expect = 1e-12
Identities = 78/97 (80%), Gaps = 0/97 (0%)
Strand=Plus/Minus
Query 200934 ACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCA 200993
||||||||||||||| |||||| | || |||||| | ||| || | ||||||||| ||||
Sbjct 2007055 ACTTATCTTCGCCGGTAAGCAGCTTGAGGATGGACGAACTCTGTCTGATTACAACATCCA 2006996
Query 200994 GAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCGA 201030
||| ||||| || ||||| || || | ||||||||
Sbjct 2006995 GAAGGAGTCCACCCTTCATCTCGTCCTCCGACTTCGA 2006959
Score = 86.0 bits (94), Expect = 1e-11
Identities = 77/97 (79%), Gaps = 0/97 (0%)
Strand=Plus/Minus
Query 200934 ACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCA 200993
||| || ||||| || |||||| | ||||||||| | ||| || |||| |||||| ||||
Sbjct 2007283 ACTCATTTTCGCTGGTAAGCAGCTCGAAGATGGACGAACTCTGTCCGACTACAACATCCA 2007224
Query 200994 GAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCGA 201030
||| ||||||||||| || || || | ||||||||
Sbjct 2007223 GAAGGAGTCTACTCTCCATCTGGTCCTTCGACTTCGA 2007187
>seq2
Length=4150472
Score = 147 bits (162), Expect = 5e-30
Identities = 164/219 (75%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 199408 TCGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGT 199467
||| |||| ||| || || |||||||| |||||||| |||| ||||||||||| | ||
Sbjct 3070612 TCGGAGTCGCAGAACGAGATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGAAAGGGT 3070553
Query 199468 CCTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCC 199527
| || || || |||||||| ||||||||||| || |||||||||||||| ||||||
Sbjct 3070552 TCGGCCGTCCTCGAGCTGCTTACCGGCGAAGATAAGTCGCTGCTGGTCCGGGGGAATTCC 3070493
Query 199528 TTCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAA 199587
|| ||||| ||||| ||| ||| |||| |||||| | | || || || |
Sbjct 3070492 CTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACCTCAAG 3070433
Query 199588 CGTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
||||| |||||||| || || || || |||||||| ||
Sbjct 3070432 GGTGATAGTCTTACCGGTAAGGGTCTTGACAAAAATCTG 3070394
Score = 143 bits (158), Expect = 6e-29
Identities = 163/219 (74%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 199408 TCGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGT 199467
||| |||| ||| ||||| |||||||| |||||||| |||| ||||||||||| | |||
Sbjct 3374814 TCGGAGTCGCAGAACAAGATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGAGT 3374873
Query 199468 CCTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCC 199527
| || || || |||||||| |||||||| ||||| |||||||||||||| ||| ||
Sbjct 3374874 TCGGCCGTCCTCGAGCTGCTTGCCGGCGAAAATGAGTCGCTGCTGGTCCGGGGGAATGCC 3374933
Query 199528 TTCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAA 199587
|| ||||| ||||| ||| ||| || | |||||| | | || || || |
Sbjct 3374934 CTCCTTGTCCTGGATCTTGGACTTGACGTTGTCAATGGTGTCGGAAGACTCCACCTCGAG 3374993
Query 199588 CGTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
||||| ||||| || || || || || ||||| |||||
Sbjct 3374994 GGTGATGGTCTTGCCAGTAAGGGTCTTGACAAAGATTTG 3375032
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1178921313006273
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