Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20sp._20JCM_2030694_20[genbank_20GCA_5F001600515.1_202016-
03-01] 19 sequences; 21,758,297 total letters
Query= NC_013953.1
Length=156344
Score E
Sequences producing significant alignments: (Bits) Value
seq6 282 4e-71
seq2 132 5e-26
seq1 122 9e-23
>seq6
Length=2655350
Score = 282 bits (312), Expect = 4e-71
Identities = 593/876 (68%), Gaps = 11/876 (1%)
Strand=Plus/Minus
Query 132625 TTCTCaaaaaaaTTAGTTTTTCCCTCCAAGGAAATGAGCGTCATAAAATCCAAGGGGTTG 132684
||||| || || || || ||||| ||| |||||| | ||| || || |||||||||
Sbjct 575179 TTCTCGAAGAAGTTGGTCTTTCCAGCCAGAGAAATGTTCTCCATGAAGTCAAAGGGGTTG 575120
Query 132685 GCTGTGTTGTAGTGCTTGGTGCCGATCAGGTCGACGAGCAGCCTGTCGGCCACGAACTCG 132744
| | ||||||| ||||| | || | || ||||| | ||||||||| |||||
Sbjct 575119 GTGGAGTTGTAGACCTTGGGGTTTCCAAGAGCAACAAGCAGACGGTCGGCCACAAACTCA 575060
Query 132745 ATGTATTGCGACATG-GTTTCGCAATTAAGTCCCAGCAGACGCACC-GGCAGCGCTTCGG 132802
||||| || |||| | || || || | || ||||||| ||| || || || || |
Sbjct 575059 ATGTACTGTCGCATGAGCTTGGCG-TTCATACCGAGCAGAC-CACAAGGGAGAGCATCAG 575002
Query 132803 TGAGAAAGCGTTGCTCGATGGCGACCGCGTCGGTGACGATTTCCCTAACGCGCGCCGCGC 132862
| || || ||||| ||| | || || ||| | || ||| || | | |
Sbjct 575001 TAAGGAACTCCTGCTCAATGCCAACAGCCTCGACAATGACGTCCTCGACAATCTTCTTGG 574942
Query 132863 TCGGCCGTTGCACCAAATGCTTGAACATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCGT 132922
|| || | | | | || ||| | || || ||||||||| |||| ||||| |
Sbjct 574941 AGGGTCGGTTCTCGAGGTGAGAGAAGAGCAGACAGGCAAAGTCGGTGTGCAGACCCTCAT 574882
Query 132923 CCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCC 132982
| | |||||||| |||||| ||| |||| ||| |||||||| || || || |||||||
Sbjct 574881 CTCGAGAAATGAGCTCGTTGGAGAAGGTCAGGCCAGGCATGAGACCTCGCTTCTTGAGCC 574822
Query 132983 AAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCCCTCGACGGCCGCGAAAGCCACCA 133042
| || |||| ||| ||| || || ||||| | ||||| ||||| || || || | |
Sbjct 574821 AGAAAATGGAGGCAAAAGATCCGGAGAAGAAAATACCCTCAACGGCAGCAAAGGCGATAA 574762
Query 133043 GGCGCTCGCCGAACGTGGCTTCTTTGCTGGCGATCCAGCGCAGCGCCCATTCGGCCTTTT 133102
| |||||||| || || | || | | || |||||| || ||||| |||||||| |
Sbjct 574761 GTCGCTCGCCAAAGGTAGACTCGTCGTCGGAGATCCACTTGAGAGCCCAGTCGGCCTTCT 574702
Query 133103 CTTTGACGCACGGCATCGTTTCGATGGCGTTCAACAAACGGAGTTTCTCTTCCGAGGAAC 133162
|||| ||| || || || || |||||||| |||| | | ||| || | || |
Sbjct 574701 TCTTGATGCAGGGAATGGTCTCAATGGCGTTGAACAG--GTAAGTTCGCTCCTTGGGGTC 574644
Query 133163 GC--ACGTAGGTGTCGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGAT 133220
| ||| || || ||||| || || | || || || | ||||||||| |||
Sbjct 574643 CTTGATGTAAGTATCAATGAGCAGAGAGTAGGTCTCGGAATGGATGTTCTCCATCATGAT 574584
Query 133221 TTGAAAGCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTCGAC 133280
|| || ||||| |||||| ||||| |||| || ||| || ||| ||||| ||
Sbjct 574583 CTGGAATCCGTAGAAGCACTTGGCCTCAGGAGCCTGAACCTCTCCAGAGAACCGCTCAAC 574524
Query 133281 CAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAA 133340
||| || |||||||| || ||||| ||| || || || |||||||||||| |||||
Sbjct 574523 CAGGTTCTCGTTGACAATACCGTCAGAGGCAGCAAAGAAAGCCAGCACGTGCGAAATGAA 574464
Query 133341 ATGGCGCTCGTTGTCGTTCAAGCG---CTCCCAGTCGCGCGTGTCCTTGGACAGGTCCAC 133397
| ||||| | ||| | || ||||||||||| | | |||||| || || |
Sbjct 574463 AAACTTCTCGTCGCTGTTGAGCCGGTTCTCCCAGTCGCCCATATCCTTGCCGAGATCAAT 574404
Query 133398 CTCCTCGACGGTCCAAAACGACGCCTCGGCTTTTTTGTACATACTCCACATGTCCGAATA 133457
||||||| ||||||| || || |||||||| || |||||||| ||| || || ||
Sbjct 574403 CTCCTCGGCGGTCCAGAAAGAAGCCTCGGCCTTCTTGTACATCTGCCAAATCTCATGGTA 574344
Query 133458 TTGTATGGGAAAAATCACAAACCGGCGGGGGTTTTC 133493
|| || || || | ||||||||| ||| ||| ||
Sbjct 574343 CTGAATAGGGAAGAGCACAAACCGTCGGTTGTTCTC 574308
>seq2
Length=4150472
Score = 132 bits (146), Expect = 5e-26
Identities = 160/215 (74%), Gaps = 2/215 (1%)
Strand=Plus/Minus
Query 38245 TGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCG 38304
||||||| || || || || || || ||||| ||||||||| |||| || ||| | |||
Sbjct 3375034 TGCAAATCTTTGTCAAGACCCTTACTGGCAAGACCATCACCCTCGAGGTGGAGTCTTCCG 3374975
Query 38305 ACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363
||| | | | |||| | || || |||| ||||| ||||| |||||| | |||||
Sbjct 3374974 ACACCATTGACAACG-TCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAG 3374916
Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423
||||| ||||||| ||| ||||| ||||| || |||| || || ||| |||||||||
Sbjct 3374915 CAGCGACTCATTTTCGCCGGCAAGCAGCTCGAGGACGGCCGAACTCTCTCTGACTACAAC 3374856
Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458
||||| ||||| | || || ||| | || |||||
Sbjct 3374855 ATCCAGAAGGAGTCCACTCTCCATCTTGTTCTGCG 3374821
Score = 111 bits (122), Expect = 2e-19
Identities = 157/218 (72%), Gaps = 2/218 (1%)
Strand=Plus/Plus
Query 38242 AAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCA 38301
||||||| || || || || || || || || || || |||||| | || || ||| |
Sbjct 3070389 AAATGCAGATTTTTGTCAAGACCCTTACCGGTAAGACTATCACCCTTGAGGTGGAGTCTT 3070448
Query 38302 CCGACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGAC 38360
|||||| | | | |||| | || || |||| ||||| |||||||||||| | |||
Sbjct 3070449 CCGACACCATCGACAACG-TCAAGTCCAAGATCCAGGACAAGGAGGGAATTCCCCCGGAC 3070507
Query 38361 CAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 38420
|| ||||| || || | ||| || || ||||| || |||| || ||||| ||||||
Sbjct 3070508 CAGCAGCGACTTATCTTCGCCGGTAAGCAGCTCGAGGACGGCCGAACCCTTTCTGACTAC 3070567
Query 38421 AACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458
|||||||| ||||| | || || ||| | || |||||
Sbjct 3070568 AACATCCAGAAGGAGTCCACTCTCCATCTCGTTCTGCG 3070605
>seq1
Length=4845111
Score = 122 bits (134), Expect = 9e-23
Identities = 156/215 (73%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| || || ||||| || || ||||| ||| | || |||||| || ||
Sbjct 2007408 ATGCAGATTTTCGTGAAGACCCTCACTGGAAAGACCATTACCCTTGAGGTCGAGTCCTCC 2007349
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363
|||| | | | | | || || || | ||||| |||||||||||| | |||||
Sbjct 2007348 GACACCATTGACAATGTCAAGTCCAAGATTCAGGACAAGGAGGGAATTCCCCCGGACCAG 2007289
Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423
||||| ||||||| ||| || || ||||| || || | || || || ||||||||||
Sbjct 2007288 CAGCGACTCATTTTCGCTGGTAAGCAGCTCGAAGATGGACGAACTCTGTCCGACTACAAC 2007229
Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458
||||| ||||| | || || ||| |||| || ||
Sbjct 2007228 ATCCAGAAGGAGTCTACTCTCCATCTGGTCCTTCG 2007194
Score = 107 bits (118), Expect = 2e-18
Identities = 155/216 (72%), Gaps = 2/216 (1%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| || || || || ||||| || |||||| | || |||||| | |
Sbjct 2007636 ATGCAGATCTTCGTCAAGACCCTGACCGGCAAGACTATCACCCTTGAGGTCGAGTCTTCT 2007577
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|||| | | | |||| | || || || | ||||| |||||||| ||| | |||||
Sbjct 2007576 GACACCATTGACAACG-TCAAGTCCAAGATTCAGGACAAGGAGGGAATCCCCCCGGACCA 2007518
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||||| ||||||| ||| || || ||||| || |||| || || || ||||||||
Sbjct 2007517 GCAGCGACTCATTTTCGCTGGAAAGCAGCTTGAGGACGGACGAACTCTGTCTGACTACAA 2007458
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458
|||||| ||||| | || || ||| | || || ||
Sbjct 2007457 CATCCAGAAGGAGTCCACCCTTCATCTTGTCCTCCG 2007422
Score = 89.7 bits (98), Expect = 5e-13
Identities = 151/216 (70%), Gaps = 2/216 (1%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || || || || || || || || || ||||||||| |||| || ||| | |
Sbjct 2007180 ATGCAGATCTTTGTCAAGACTCTGACTGGAAAGACCATCACCCTCGAGGTTGAGTCTTCT 2007121
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|||| | | | |||| | || || || | ||||| |||||||||||| | |||||
Sbjct 2007120 GACACCATTGACAACG-TCAAGTCTAAGATTCAGGACAAGGAGGGAATTCCCCCGGACCA 2007062
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||||| || || | ||| || || ||||| || || | || || || || |||||
Sbjct 2007061 GCAGCGACTTATCTTCGCCGGTAAGCAGCTTGAGGATGGACGAACTCTGTCTGATTACAA 2007002
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458
|||||| ||||| | || || ||| | || || ||
Sbjct 2007001 CATCCAGAAGGAGTCCACCCTTCATCTCGTCCTCCG 2006966
Score = 89.7 bits (98), Expect = 5e-13
Identities = 93/122 (76%), Gaps = 0/122 (0%)
Strand=Plus/Minus
Query 38337 GACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGAC 38396
||||| |||||||| ||| | ||||| ||||| ||||| | ||| || || ||||| ||
Sbjct 2007771 GACAAGGAGGGAATCCCCCCGGACCAGCAGCGACTCATCTTCGCTGGAAAGCAGCTTGAG 2007712
Query 38397 GACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTG 38456
|| | || |||||| |||||||||||| || ||||| | || || ||| |||| ||
Sbjct 2007711 GATGGCCGAACCCTCTCCGACTACAACATTCAGAAGGAGTCCACTCTCCATCTGGTCCTC 2007652
Query 38457 CG 38458
||
Sbjct 2007651 CG 2007650
Score = 86.0 bits (94), Expect = 6e-12
Identities = 102/136 (75%), Gaps = 2/136 (1%)
Strand=Plus/Minus
Query 107663 CTTGAGGTTGCCCAGGTCGCCGACGTGCCTGATCTCGG-CGTCGGGCGCGCCGTGGTCGC 107721
||||| |||||| ||||| || ||||| | | || | ||| ||| || |||||||
Sbjct 2763690 CTTGACGTTGCCGAGGTCTCCAACGTGTC-GCTCAGTGTCGTTGGGGGCTCCGTGGTTCT 2763632
Query 107722 GCTTCGTCGGGTTGAAATGCTCGCCGGCCGACGTGCAGCCGTTGCTCGCGTCGCCGAACT 107781
||| |||||||| || |||||| || |||||||||||| | ||| || ||||
Sbjct 2763631 TCTTGAAGGGGTTGAAGTGGGGGCCGGCGGAGGTGCAGCCGTTGGTGTTGTCTCCAAACT 2763572
Query 107782 CGTGCACGTGGAAGCC 107797
||||||||||||||||
Sbjct 2763571 CGTGCACGTGGAAGCC 2763556
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 500172681208960
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