Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yarrowia_20sp._20JCM_2030694_20[genbank_20GCA_5F001600515.1_202016- 03-01] 19 sequences; 21,758,297 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq6 228 3e-54 seq3 122 3e-22 seq2 107 8e-18 seq1 98.7 4e-15 >seq6 Length=2655350 Score = 228 bits (252), Expect = 3e-54 Identities = 1028/1605 (64%), Gaps = 57/1605 (4%) Strand=Plus/Minus Query 450913 AGCAATTGGAATTGATCTTGGAACCACCTTTTCATGTGTAGGTG--TTTACCAAAATGGA 450970 |||| | ||||| ||||| |||||||| | || ||||| | ||| |||| || Sbjct 100874 AGCAGTAGGAATCGATCTGGGAACCACATACTCCTGTGTGGCCCATTTTGCCAA--TGAC 100817 Query 450971 AATGTAGAAATTATAGCAAATGACCAAGGATCACGAACTACTCCTTCATGGGTAAGTTTT 451030 | || ||||| || ||||| ||||| ||| |||| || || || | || ||| Sbjct 100816 AGAGTCGAAATCATTGCAAACGACCAGGGAAACAGAACCACCCCCTCGTTTGTCGCTTTC 100757 Query 451031 ACGGATTCAGAAAGACTTTTAGGGCAAGCTGCTAA-ATCAATGGTAAATTCAAA--TGCC 451087 || || | ||| |||| | || | ||||| || | | | | | || |||| Sbjct 100756 ACCGACACTGAACGACTCATCGGAGATGCTGCAAAGAACCAGGCAGCCATGAACCCTGCC 100697 Query 451088 AAAAACACAGTATATGATGCTAAACGTTTAATTGGCCGTATGTATGATGATGATACTGTA 451147 || ||| || | ||| || || || | ||||| || | || |||||| | | || Sbjct 100696 AA---CACCGTTTTTGACGCCAAGCGACTCATTGGACGAAAGTTTGATGACGCTGAAGTT 100640 Query 451148 CAAAAAGAGAAAAAATTCTTTTCTTATGATGTAGTAAATCAAAAAGGAAAGCCCTATATT 451207 ||||| || ||| |||| | | | | | | || | |||||||| ||||| Sbjct 100639 CAAAACGACGCTAAACACTTTCCCTTTAAGATCATCGATAAGGCTGGAAAGCCGAATATT 100580 Query 451208 CAAGTAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATGGTT 451267 | || | | || || |||| || ||| ||||||| ||||| || || ||| || Sbjct 100579 GAGGTCGAATTCAAGGGCGAAAACAAGGTGTTTACTCCTGAGGAAATCTCGTCCATGATT 100520 Query 451268 CTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGTA 451327 || ||||||||||| || || || || ||| |||| | || | |||||| || Sbjct 100519 CTCACTAAAATGAAGGAGACTGCCGAGGGATACCTTGGATGCAAGGTCAATGATGCTGTC 100460 Query 451328 ATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACAT 451387 || ||||| || ||||| || || ||| | || || || || || || || || || Sbjct 100459 ATCACTGTACCTGCTTACTTTAACGATTCTCAGCGACAGGCTACAAAGGACGCTGGTTTG 100400 Query 451388 ATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATAT 451447 ||||| ||| | ||||| | |||| ||||| ||||| ||||| |||||| | || ||| Sbjct 100399 ATTGCCGGTCTGAATGTCCAGAGAATCATTAACGAACCCACAGCTGCTGCTATTGCTTAT 100340 Query 451448 GGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGTGGA 451507 || || | || || ||| | | || ||| | | | || ||| | || ||| Sbjct 100339 GGTCTTGATAA---GAAGGAAGCTGGTGAGCGAAACGTGCTCATTTTCGATCTCGGAGGA 100283 Query 451508 GGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAAAGGCAACC 451567 |||||| || ||| | | || ||||||||||| | || ||||| ||||| || Sbjct 100282 GGAACTTTCGACGTGTCTCTTTTGTCGATTGAAGATGGAATTTTCGAAGTCAAGGCTACT 100223 Query 451568 AATGGTGATACTCATCTAGGAGGTGAAGATATTGATAATGCAATTGTGGA----ATGGTT 451623 ||| ||||||||||| ||||| || || |||| || | ||| | | ||| Sbjct 100222 GCTGGAGATACTCATCTTGGAGGAGAGGACTTTGACAACCGTCTGGTGAACCACTTTGTT 100163 Query 451624 GAAAACTGATGTTCAA-CGAAAACTAAAAGTA-GATATTTCTACTAACCAAAAAGCACTT 451681 | | ||||| ||||| | | ||| | || ||||| || || || | ||| || Sbjct 100162 -----CAGGAATTCAAGCGAAAGC-ACAAGAAGGACATTTCGACGAATCAGAGAGCTCTG 100109 Query 451682 AGACGTCTTAAAACATCAGCAGAAAAAGCTA----AAATTACACTCAGTTCAACACAAAC 451737 |||||||| | ||| | || ||||| || || || | ||| | || || Sbjct 100108 AGACGTCTGAGAACTGCTTGTGAGCGAGCTAAGCGAACTTTGTCTTCG-TCAGCTCAGAC 100050 Query 451738 TACTAGTATAAACATTGATAGTTTAGTTGATGGAATGGATTATGCTACTACTCTTACCCG 451797 | | ||| | |||||| | | ||| || || |||| ||| | | || || Sbjct 100049 TTC---TATTGAAATTGATTCTCTTTATGAGGGTATTGATTTCTACACTTCCATCACTCG 99993 Query 451798 TGCTAAATTTGAATCAATTTGTTCCAGTATTTTTGCACGGGTA--ATGAAACCTGTTGAT 451855 ||| |||||| | ||||| ||| |||| | || || | || | ||||| || Sbjct 99992 AGCTCGATTTGAGGAACTTTGT--CAGGATTTGTTCAGAGGCACTATTGATCCTGTGGAG 99935 Query 451856 CAAGTATTACATGATTCTAAAATTAGTAAAGATAAAATTGATGAAATTGTGCTTGTAGGA 451915 | || | | || | || || ||||| | | | || ||||| || || ||| Sbjct 99934 AAGGTTCTTCGAGACGCCAAGATGGATAAAGCTTCTGTCAACGAGATTGTTCTAGTTGGA 99875 Query 451916 GGTTCTACACGAATTCCTAAAATTCAAGATATGTTGTCTTCTTATTTTGGAGGAAAACAA 451975 || || || |||||||| || | || | || | ||| || ||| || || || Sbjct 99874 GGATCCACTCGAATTCCCAAGGTGCAGAAACTGGTTTCTGATTTTTTCAACGGCAAGGAA 99815 Query 451976 CTATGTAAGAG---CGTAAATCCTGATGAAGCTGTTGCATATGGTGCTGCAGTTCAAGCA 452032 || || || | | || || |||||||||||||| ||||| ||||| ||||| || Sbjct 99814 CT---CAACAGATCCATCAACCCCGATGAAGCTGTTGCCTATGGAGCTGCTGTTCAGGCT 99758 Query 452033 GCTATTCTAACAGG-TTCAGATGATGAAAAATTAGGAGATATTCTGTTAGTAGATGTAAC 452091 |||||||| |||| || | | | | | ||||||||| | | || || | Sbjct 99757 GCTATTCTCTCAGGAGACACTTCTTCTTCCACTCAG-GATATTCTGCTTCTTGACGTTGC 99699 Query 452092 ACCTCTATCTCTTGGAGTTGAAACAGCTGGTGGAATGATGACTAATTTAATTAAACGAGG 452151 ||||| ||||||||| |||| || ||||| ||| | |||||||| | ||| ||| Sbjct 99698 TCCTCTGTCTCTTGGAATTGAGACTGCTGGAGGAGTTATGACTAAACTGATTCCTCGA-- 99641 Query 452152 AACT--TCTATTCCTTGTAAAAAGAGTCAAACATTTAGTACAGCAA--GTGATAACCAAC 452207 |||| ||||||| || ||| | ||||||| | || | | ||||||||| | Sbjct 99640 AACTCCACTATTCCCACCAAGAAGTCTGAAACATT--CTCCACCTACGCTGATAACCAGC 99583 Query 452208 CAGGTGTAACTATTCAAGTGTTTGAAGGAGAACGTGCAATGACACGA--GATAATAATAA 452265 | || || ||||| || || |||||||| | || | | || | ||||| |||| Sbjct 99582 CTGGAGTTCTGATTCAGGTTTTCGAAGGAGAGAGAGC--TCAAACCAAGGATAACAATAT 99525 Query 452266 ACTAGGAGAATTTACTCTTTCAAACATTCCTCCTATGCCAAGGGGAACTCCTCAAATTGA 452325 || || |||| || || || |||||| || | ||| |||||| ||||| Sbjct 99524 TCTCGGTAAATTCGAGCTCTCTGGAATCCCTCCTGCTCCTCGAGGAGTTCCTCAGATTGA 99465 Query 452326 AATTACCTATGATGTTGATGCAAATGGTATTCTTAATGTGAGTGCAGTTGAAAAATCATC 452385 | || | ||||| || || || |||||||| || || ||| || ||||| | Sbjct 99464 GGTCACTTTCGATGTGGACGCCAACGGTATTCTCAACGTCTCTGCTGTGGAAAAGGGTAC 99405 Query 452386 TGGAAAATCAGAAAAAATTACAATTACTAATGATAAAAACCGTTTATCTAAAGAAGATAT 452445 ||| ||| | | |||| || || || || ||||| ||| | || || || || || Sbjct 99404 TGGTAAAACCCAGCAAATCACCATCACCAACGATAAGGGCCGACTTTCCAAGGAGGACAT 99345 Query 452446 TGAAAAAATGGTAGATGAAGCAGAAAAATTCAAGGATGATGATGA 452490 |||| |||||| | || || ||||| | |||||| || ||||| Sbjct 99344 TGAACGAATGGTGAACGATGCTGAAAAGTACAAGGACGAAGATGA 99300 >seq3 Length=2956712 Score = 122 bits (134), Expect = 3e-22 Identities = 197/282 (70%), Gaps = 5/282 (2%) Strand=Plus/Plus Query 451325 GTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGA 451384 || || ||||| || || || || || ||| | || || ||||| || || ||||| || Sbjct 1287114 GTCATCACTGTGCCTGCCTACTTTAACGATTCTCAGCGACAAGCTACCAAGGATGCCGGT 1287173 Query 451385 CATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCA 451444 | |||||| ||| | || ||||| ||||| || || || ||||| || |||||| | || Sbjct 1287174 CTTATTGCCGGTCTCAACGTTCTGCGAATCATCAACGAGCCTACCGCTGCTGCTATTGCT 1287233 Query 451445 TATGGACTAGGAAAATCAAAAGAAACAGAA-GaaaaaaaTATTTTAGTATTTGATTTTGG 451503 || || || | || | ||| ||| || | || || | | || ||| |||| Sbjct 1287234 TACGGTCTTG----ATAAGAAGGGCCAGGGTGAGCAGAACGTTCTGATTTTCGATCTTGG 1287289 Query 451504 TGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAAAGGC 451563 ||||||||| |||| |||| | || || ||||| || || | || || || ||||| Sbjct 1287290 AGGAGGAACTTTTGATGTTTCTCTGCTGTCCATTGAGGACGGTATTTTCGAGGTCAAGGC 1287349 Query 451564 AACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGATAA 451605 || ||| ||||||||||| || ||||| ||| | ||||| Sbjct 1287350 CACTGCTGGAGATACTCATCTGGGTGGTGAGGATTTCGATAA 1287391 >seq2 Length=4150472 Score = 107 bits (118), Expect = 8e-18 Identities = 200/293 (68%), Gaps = 3/293 (1%) Strand=Plus/Plus Query 451313 GTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACT 451372 || |||||||| || || ||||| || || || ||||| ||| | || || || || || Sbjct 1384836 GTCACTGATGCCGTCATCACTGTCCCTGCCTACTTCAACGATTCTCAGCGACAGGCTACC 1384895 Query 451373 AAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCA 451432 || ||||| || | ||||| ||| | || || | ||||| || || || ||||| || Sbjct 1384896 AAGGATGCCGGTCTCATTGCCGGTCTTAACGTCCAGCGAATCATCAACGAGCCTACCGCC 1384955 Query 451433 GCTGCTCTAGCATATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTA 451492 ||||| | || || || || | || || || | | || ||| || | | Sbjct 1384956 GCTGCCATTGCCTACGGTCTTGACAAG---AAGGAGGCCGGTGAGCGAAACGTTCTCATC 1385012 Query 451493 TTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTT 451552 || ||| ||||||||||||| ||| |||| | || || || || || || | || Sbjct 1385013 TTCGATCTTGGTGGAGGAACCTTCGATGTTTCTCTCCTGTCCATCGAGGACGGTATCTTC 1385072 Query 451553 GAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGATAA 451605 || || ||||| ||| |||||| || ||||| || ||||| ||| | ||||| Sbjct 1385073 GAGGTCAAGGCCACCGCTGGTGACACCCATCTTGGTGGTGAGGATTTCGATAA 1385125 >seq1 Length=4845111 Score = 98.7 bits (108), Expect = 4e-15 Identities = 184/269 (68%), Gaps = 6/269 (2%) Strand=Plus/Plus Query 451329 TTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATA 451388 ||||||| |||||||| ||||| ||||| || || || || || || || || || | Sbjct 2618519 TTACTGTCCCCGCTTACTTCAACGATGCTCAGCGACAGGCCACCAAGGACGCCGGTGTCA 2618578 Query 451389 TTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATG 451448 |||||||| | || ||||| |||||| | || || ||||| || || || | || || | Sbjct 2618579 TTGCTGGTCTCAACGTTCTGCGAATTGTCAACGAGCCTACCGCCGCCGCCATTGCTTACG 2618638 Query 451449 GACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGTGGAG 451508 |||| | | || | | || |||| | || || || | ||| ||||||||| Sbjct 2618639 GACTCG----ACCACACCGACGAGGAGAAGCAGATCATT--GTTTACGATCTTGGTGGAG 2618692 Query 451509 GAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAAAGGCAACCA 451568 |||| |||| ||| | || || ||||| ||| || ||||| || || ||| Sbjct 2618693 GAACCTTTGATGTGTCTCTCCTGTCCATTGAGTCTGGTGTCTTTGAGGTCCTTGCCACCG 2618752 Query 451569 ATGGTGATACTCATCTAGGAGGTGAAGAT 451597 ||||| || ||||| ||||| || ||| Sbjct 2618753 CCGGTGACACCCATCTGGGAGGAGAGGAT 2618781 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975717919036052