Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20sp._20JCM_2030694_20[genbank_20GCA_5F001600515.1_202016-
03-01] 19 sequences; 21,758,297 total letters
Query= NC_014637.1
Length=617453
Score E
Sequences producing significant alignments: (Bits) Value
seq6 228 3e-54
seq3 122 3e-22
seq2 107 8e-18
seq1 98.7 4e-15
>seq6
Length=2655350
Score = 228 bits (252), Expect = 3e-54
Identities = 1028/1605 (64%), Gaps = 57/1605 (4%)
Strand=Plus/Minus
Query 450913 AGCAATTGGAATTGATCTTGGAACCACCTTTTCATGTGTAGGTG--TTTACCAAAATGGA 450970
|||| | ||||| ||||| |||||||| | || ||||| | ||| |||| ||
Sbjct 100874 AGCAGTAGGAATCGATCTGGGAACCACATACTCCTGTGTGGCCCATTTTGCCAA--TGAC 100817
Query 450971 AATGTAGAAATTATAGCAAATGACCAAGGATCACGAACTACTCCTTCATGGGTAAGTTTT 451030
| || ||||| || ||||| ||||| ||| |||| || || || | || |||
Sbjct 100816 AGAGTCGAAATCATTGCAAACGACCAGGGAAACAGAACCACCCCCTCGTTTGTCGCTTTC 100757
Query 451031 ACGGATTCAGAAAGACTTTTAGGGCAAGCTGCTAA-ATCAATGGTAAATTCAAA--TGCC 451087
|| || | ||| |||| | || | ||||| || | | | | | || ||||
Sbjct 100756 ACCGACACTGAACGACTCATCGGAGATGCTGCAAAGAACCAGGCAGCCATGAACCCTGCC 100697
Query 451088 AAAAACACAGTATATGATGCTAAACGTTTAATTGGCCGTATGTATGATGATGATACTGTA 451147
|| ||| || | ||| || || || | ||||| || | || |||||| | | ||
Sbjct 100696 AA---CACCGTTTTTGACGCCAAGCGACTCATTGGACGAAAGTTTGATGACGCTGAAGTT 100640
Query 451148 CAAAAAGAGAAAAAATTCTTTTCTTATGATGTAGTAAATCAAAAAGGAAAGCCCTATATT 451207
||||| || ||| |||| | | | | | | || | |||||||| |||||
Sbjct 100639 CAAAACGACGCTAAACACTTTCCCTTTAAGATCATCGATAAGGCTGGAAAGCCGAATATT 100580
Query 451208 CAAGTAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATGGTT 451267
| || | | || || |||| || ||| ||||||| ||||| || || ||| ||
Sbjct 100579 GAGGTCGAATTCAAGGGCGAAAACAAGGTGTTTACTCCTGAGGAAATCTCGTCCATGATT 100520
Query 451268 CTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGTA 451327
|| ||||||||||| || || || || ||| |||| | || | |||||| ||
Sbjct 100519 CTCACTAAAATGAAGGAGACTGCCGAGGGATACCTTGGATGCAAGGTCAATGATGCTGTC 100460
Query 451328 ATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACAT 451387
|| ||||| || ||||| || || ||| | || || || || || || || || ||
Sbjct 100459 ATCACTGTACCTGCTTACTTTAACGATTCTCAGCGACAGGCTACAAAGGACGCTGGTTTG 100400
Query 451388 ATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATAT 451447
||||| ||| | ||||| | |||| ||||| ||||| ||||| |||||| | || |||
Sbjct 100399 ATTGCCGGTCTGAATGTCCAGAGAATCATTAACGAACCCACAGCTGCTGCTATTGCTTAT 100340
Query 451448 GGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGTGGA 451507
|| || | || || ||| | | || ||| | | | || ||| | || |||
Sbjct 100339 GGTCTTGATAA---GAAGGAAGCTGGTGAGCGAAACGTGCTCATTTTCGATCTCGGAGGA 100283
Query 451508 GGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAAAGGCAACC 451567
|||||| || ||| | | || ||||||||||| | || ||||| ||||| ||
Sbjct 100282 GGAACTTTCGACGTGTCTCTTTTGTCGATTGAAGATGGAATTTTCGAAGTCAAGGCTACT 100223
Query 451568 AATGGTGATACTCATCTAGGAGGTGAAGATATTGATAATGCAATTGTGGA----ATGGTT 451623
||| ||||||||||| ||||| || || |||| || | ||| | | |||
Sbjct 100222 GCTGGAGATACTCATCTTGGAGGAGAGGACTTTGACAACCGTCTGGTGAACCACTTTGTT 100163
Query 451624 GAAAACTGATGTTCAA-CGAAAACTAAAAGTA-GATATTTCTACTAACCAAAAAGCACTT 451681
| | ||||| ||||| | | ||| | || ||||| || || || | ||| ||
Sbjct 100162 -----CAGGAATTCAAGCGAAAGC-ACAAGAAGGACATTTCGACGAATCAGAGAGCTCTG 100109
Query 451682 AGACGTCTTAAAACATCAGCAGAAAAAGCTA----AAATTACACTCAGTTCAACACAAAC 451737
|||||||| | ||| | || ||||| || || || | ||| | || ||
Sbjct 100108 AGACGTCTGAGAACTGCTTGTGAGCGAGCTAAGCGAACTTTGTCTTCG-TCAGCTCAGAC 100050
Query 451738 TACTAGTATAAACATTGATAGTTTAGTTGATGGAATGGATTATGCTACTACTCTTACCCG 451797
| | ||| | |||||| | | ||| || || |||| ||| | | || ||
Sbjct 100049 TTC---TATTGAAATTGATTCTCTTTATGAGGGTATTGATTTCTACACTTCCATCACTCG 99993
Query 451798 TGCTAAATTTGAATCAATTTGTTCCAGTATTTTTGCACGGGTA--ATGAAACCTGTTGAT 451855
||| |||||| | ||||| ||| |||| | || || | || | ||||| ||
Sbjct 99992 AGCTCGATTTGAGGAACTTTGT--CAGGATTTGTTCAGAGGCACTATTGATCCTGTGGAG 99935
Query 451856 CAAGTATTACATGATTCTAAAATTAGTAAAGATAAAATTGATGAAATTGTGCTTGTAGGA 451915
| || | | || | || || ||||| | | | || ||||| || || |||
Sbjct 99934 AAGGTTCTTCGAGACGCCAAGATGGATAAAGCTTCTGTCAACGAGATTGTTCTAGTTGGA 99875
Query 451916 GGTTCTACACGAATTCCTAAAATTCAAGATATGTTGTCTTCTTATTTTGGAGGAAAACAA 451975
|| || || |||||||| || | || | || | ||| || ||| || || ||
Sbjct 99874 GGATCCACTCGAATTCCCAAGGTGCAGAAACTGGTTTCTGATTTTTTCAACGGCAAGGAA 99815
Query 451976 CTATGTAAGAG---CGTAAATCCTGATGAAGCTGTTGCATATGGTGCTGCAGTTCAAGCA 452032
|| || || | | || || |||||||||||||| ||||| ||||| ||||| ||
Sbjct 99814 CT---CAACAGATCCATCAACCCCGATGAAGCTGTTGCCTATGGAGCTGCTGTTCAGGCT 99758
Query 452033 GCTATTCTAACAGG-TTCAGATGATGAAAAATTAGGAGATATTCTGTTAGTAGATGTAAC 452091
|||||||| |||| || | | | | | ||||||||| | | || || |
Sbjct 99757 GCTATTCTCTCAGGAGACACTTCTTCTTCCACTCAG-GATATTCTGCTTCTTGACGTTGC 99699
Query 452092 ACCTCTATCTCTTGGAGTTGAAACAGCTGGTGGAATGATGACTAATTTAATTAAACGAGG 452151
||||| ||||||||| |||| || ||||| ||| | |||||||| | ||| |||
Sbjct 99698 TCCTCTGTCTCTTGGAATTGAGACTGCTGGAGGAGTTATGACTAAACTGATTCCTCGA-- 99641
Query 452152 AACT--TCTATTCCTTGTAAAAAGAGTCAAACATTTAGTACAGCAA--GTGATAACCAAC 452207
|||| ||||||| || ||| | ||||||| | || | | ||||||||| |
Sbjct 99640 AACTCCACTATTCCCACCAAGAAGTCTGAAACATT--CTCCACCTACGCTGATAACCAGC 99583
Query 452208 CAGGTGTAACTATTCAAGTGTTTGAAGGAGAACGTGCAATGACACGA--GATAATAATAA 452265
| || || ||||| || || |||||||| | || | | || | ||||| ||||
Sbjct 99582 CTGGAGTTCTGATTCAGGTTTTCGAAGGAGAGAGAGC--TCAAACCAAGGATAACAATAT 99525
Query 452266 ACTAGGAGAATTTACTCTTTCAAACATTCCTCCTATGCCAAGGGGAACTCCTCAAATTGA 452325
|| || |||| || || || |||||| || | ||| |||||| |||||
Sbjct 99524 TCTCGGTAAATTCGAGCTCTCTGGAATCCCTCCTGCTCCTCGAGGAGTTCCTCAGATTGA 99465
Query 452326 AATTACCTATGATGTTGATGCAAATGGTATTCTTAATGTGAGTGCAGTTGAAAAATCATC 452385
| || | ||||| || || || |||||||| || || ||| || ||||| |
Sbjct 99464 GGTCACTTTCGATGTGGACGCCAACGGTATTCTCAACGTCTCTGCTGTGGAAAAGGGTAC 99405
Query 452386 TGGAAAATCAGAAAAAATTACAATTACTAATGATAAAAACCGTTTATCTAAAGAAGATAT 452445
||| ||| | | |||| || || || || ||||| ||| | || || || || ||
Sbjct 99404 TGGTAAAACCCAGCAAATCACCATCACCAACGATAAGGGCCGACTTTCCAAGGAGGACAT 99345
Query 452446 TGAAAAAATGGTAGATGAAGCAGAAAAATTCAAGGATGATGATGA 452490
|||| |||||| | || || ||||| | |||||| || |||||
Sbjct 99344 TGAACGAATGGTGAACGATGCTGAAAAGTACAAGGACGAAGATGA 99300
>seq3
Length=2956712
Score = 122 bits (134), Expect = 3e-22
Identities = 197/282 (70%), Gaps = 5/282 (2%)
Strand=Plus/Plus
Query 451325 GTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGA 451384
|| || ||||| || || || || || ||| | || || ||||| || || ||||| ||
Sbjct 1287114 GTCATCACTGTGCCTGCCTACTTTAACGATTCTCAGCGACAAGCTACCAAGGATGCCGGT 1287173
Query 451385 CATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCA 451444
| |||||| ||| | || ||||| ||||| || || || ||||| || |||||| | ||
Sbjct 1287174 CTTATTGCCGGTCTCAACGTTCTGCGAATCATCAACGAGCCTACCGCTGCTGCTATTGCT 1287233
Query 451445 TATGGACTAGGAAAATCAAAAGAAACAGAA-GaaaaaaaTATTTTAGTATTTGATTTTGG 451503
|| || || | || | ||| ||| || | || || | | || ||| ||||
Sbjct 1287234 TACGGTCTTG----ATAAGAAGGGCCAGGGTGAGCAGAACGTTCTGATTTTCGATCTTGG 1287289
Query 451504 TGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAAAGGC 451563
||||||||| |||| |||| | || || ||||| || || | || || || |||||
Sbjct 1287290 AGGAGGAACTTTTGATGTTTCTCTGCTGTCCATTGAGGACGGTATTTTCGAGGTCAAGGC 1287349
Query 451564 AACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGATAA 451605
|| ||| ||||||||||| || ||||| ||| | |||||
Sbjct 1287350 CACTGCTGGAGATACTCATCTGGGTGGTGAGGATTTCGATAA 1287391
>seq2
Length=4150472
Score = 107 bits (118), Expect = 8e-18
Identities = 200/293 (68%), Gaps = 3/293 (1%)
Strand=Plus/Plus
Query 451313 GTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACT 451372
|| |||||||| || || ||||| || || || ||||| ||| | || || || || ||
Sbjct 1384836 GTCACTGATGCCGTCATCACTGTCCCTGCCTACTTCAACGATTCTCAGCGACAGGCTACC 1384895
Query 451373 AAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCA 451432
|| ||||| || | ||||| ||| | || || | ||||| || || || ||||| ||
Sbjct 1384896 AAGGATGCCGGTCTCATTGCCGGTCTTAACGTCCAGCGAATCATCAACGAGCCTACCGCC 1384955
Query 451433 GCTGCTCTAGCATATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTA 451492
||||| | || || || || | || || || | | || ||| || | |
Sbjct 1384956 GCTGCCATTGCCTACGGTCTTGACAAG---AAGGAGGCCGGTGAGCGAAACGTTCTCATC 1385012
Query 451493 TTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTT 451552
|| ||| ||||||||||||| ||| |||| | || || || || || || | ||
Sbjct 1385013 TTCGATCTTGGTGGAGGAACCTTCGATGTTTCTCTCCTGTCCATCGAGGACGGTATCTTC 1385072
Query 451553 GAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGATAA 451605
|| || ||||| ||| |||||| || ||||| || ||||| ||| | |||||
Sbjct 1385073 GAGGTCAAGGCCACCGCTGGTGACACCCATCTTGGTGGTGAGGATTTCGATAA 1385125
>seq1
Length=4845111
Score = 98.7 bits (108), Expect = 4e-15
Identities = 184/269 (68%), Gaps = 6/269 (2%)
Strand=Plus/Plus
Query 451329 TTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATA 451388
||||||| |||||||| ||||| ||||| || || || || || || || || || |
Sbjct 2618519 TTACTGTCCCCGCTTACTTCAACGATGCTCAGCGACAGGCCACCAAGGACGCCGGTGTCA 2618578
Query 451389 TTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATG 451448
|||||||| | || ||||| |||||| | || || ||||| || || || | || || |
Sbjct 2618579 TTGCTGGTCTCAACGTTCTGCGAATTGTCAACGAGCCTACCGCCGCCGCCATTGCTTACG 2618638
Query 451449 GACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGTGGAG 451508
|||| | | || | | || |||| | || || || | ||| |||||||||
Sbjct 2618639 GACTCG----ACCACACCGACGAGGAGAAGCAGATCATT--GTTTACGATCTTGGTGGAG 2618692
Query 451509 GAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAAAGGCAACCA 451568
|||| |||| ||| | || || ||||| ||| || ||||| || || |||
Sbjct 2618693 GAACCTTTGATGTGTCTCTCCTGTCCATTGAGTCTGGTGTCTTTGAGGTCCTTGCCACCG 2618752
Query 451569 ATGGTGATACTCATCTAGGAGGTGAAGAT 451597
||||| || ||||| ||||| || |||
Sbjct 2618753 CCGGTGACACCCATCTGGGAGGAGAGGAT 2618781
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1975717919036052
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |