Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20sp._20JCM_2030694_20[genbank_20GCA_5F001600515.1_202016-
03-01] 19 sequences; 21,758,297 total letters
Query= NC_014766.1
Length=194022
Score E
Sequences producing significant alignments: (Bits) Value
seq6 140 4e-28
seq1 84.2 3e-11
>seq6
Length=2655350
Score = 140 bits (154), Expect = 4e-28
Identities = 173/235 (74%), Gaps = 4/235 (2%)
Strand=Plus/Plus
Query 102099 GCCATCCAAACAGTTCCATGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGAT 102158
||||| | || |||| || || | ||||| || || |||||| | |||||| | |
Sbjct 574674 GCCATTGAGACCATTCCCTGCATCAAGAAGAAGGCCGACTGGGCTCTCAAGTGGATC--T 574731
Query 102159 ACAAAGTCGCGTT--CCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCT 102216
| | | || || |||||| |||||||| |||| ||||| ||||||||||| |
Sbjct 574732 CCGACGACGAGTCTACCTTTGGCGAGCGACTTATCGCCTTTGCTGCCGTTGAGGGTATTT 574791
Query 102217 TCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTC 102276
||||||| || || || | | |||| |||||||||||||||||||||||||| || |
Sbjct 574792 TCTTCTCCGGATCTTTTGCCTCCATTTTCTGGCTCAAGAAGCGAGGTCTCATGCCTGGCC 574851
Query 102277 TCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 102331
| ||||||||||||||| || ||||| || ||||| || ||| || |||||
Sbjct 574852 TGACCTTCTCCAACGAGCTCATTTCTCGAGATGAGGGTCTGCACACCGACTTTGC 574906
>seq1
Length=4845111
Score = 84.2 bits (92), Expect = 3e-11
Identities = 215/320 (67%), Gaps = 7/320 (2%)
Strand=Plus/Plus
Query 15975 AAACCATCCATCTCTGTCAAAAGCTGGTTAATAGTTTGTTCCCGTTCATCATTCGCT--G 16032
||||| |||||||| || ||||||||||| ||| || || ||||| || || |
Sbjct 4406418 AAACCGTCCATCTCAACCAGAAGCTGGTTAAGAGTAGACTCTCGCTCATCGTTACCTCCG 4406477
Query 16033 GCATACCACCAGCA-CTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACGAT- 16090
|| || | | | | || | |||||| | ||||||||||||||| | || | |||
Sbjct 4406478 CCAAACTTGCCGGAGCCTCGCTTCTTTCCAATGGCATCAATCTCATCGACAAAAATGATA 4406537
Query 16091 GCATGGTTGATTTTCGCGAGCGACTTCAAAGAGATCCCGTACACGCTTGGCGCCCACACC 16150
||| | || || || || |||| || || || || || || || |||||
Sbjct 4406538 GCAGGAGCCATCTTT-CGGGCCTGGGCAAACAGGTCTCGAACTCGAGAAGCTCCAACACC 4406596
Query 16151 AACAAACATCTCCACAAAGTTTGCGGCGGAACATTGG-ATGAAGGGGACATTAGATTCAC 16209
||||||||| || ||||| | | | || || | | |||||| ||| | |||||
Sbjct 4406597 AACAAACATTTCAACAAACTCGGATCCAGA-CACGGACAGGAAGGGCACACCGGCTTCAC 4406655
Query 16210 CCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCAC 16269
| ||| |||| ||| | ||||||||||| ||||| || || | |||| || |
Sbjct 4406656 CAGCAGTGGCCTTGGCAATCAGAGTCTTACCGGTACCAGGGGGTCCAGAAAGGATAGCTC 4406715
Query 16270 CTCGTGGAATCTTGGCGCCA 16289
|||| || |||||||| |||
Sbjct 4406716 CTCGGGGGATCTTGGCTCCA 4406735
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 620742252573680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |