Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yarrowia_20sp._20JCM_2030694_20[genbank_20GCA_5F001600515.1_202016- 03-01] 19 sequences; 21,758,297 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq6 140 4e-28 seq1 84.2 3e-11 >seq6 Length=2655350 Score = 140 bits (154), Expect = 4e-28 Identities = 173/235 (74%), Gaps = 4/235 (2%) Strand=Plus/Plus Query 102099 GCCATCCAAACAGTTCCATGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGAT 102158 ||||| | || |||| || || | ||||| || || |||||| | |||||| | | Sbjct 574674 GCCATTGAGACCATTCCCTGCATCAAGAAGAAGGCCGACTGGGCTCTCAAGTGGATC--T 574731 Query 102159 ACAAAGTCGCGTT--CCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCT 102216 | | | || || |||||| |||||||| |||| ||||| ||||||||||| | Sbjct 574732 CCGACGACGAGTCTACCTTTGGCGAGCGACTTATCGCCTTTGCTGCCGTTGAGGGTATTT 574791 Query 102217 TCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTC 102276 ||||||| || || || | | |||| |||||||||||||||||||||||||| || | Sbjct 574792 TCTTCTCCGGATCTTTTGCCTCCATTTTCTGGCTCAAGAAGCGAGGTCTCATGCCTGGCC 574851 Query 102277 TCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 102331 | ||||||||||||||| || ||||| || ||||| || ||| || ||||| Sbjct 574852 TGACCTTCTCCAACGAGCTCATTTCTCGAGATGAGGGTCTGCACACCGACTTTGC 574906 >seq1 Length=4845111 Score = 84.2 bits (92), Expect = 3e-11 Identities = 215/320 (67%), Gaps = 7/320 (2%) Strand=Plus/Plus Query 15975 AAACCATCCATCTCTGTCAAAAGCTGGTTAATAGTTTGTTCCCGTTCATCATTCGCT--G 16032 ||||| |||||||| || ||||||||||| ||| || || ||||| || || | Sbjct 4406418 AAACCGTCCATCTCAACCAGAAGCTGGTTAAGAGTAGACTCTCGCTCATCGTTACCTCCG 4406477 Query 16033 GCATACCACCAGCA-CTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACGAT- 16090 || || | | | | || | |||||| | ||||||||||||||| | || | ||| Sbjct 4406478 CCAAACTTGCCGGAGCCTCGCTTCTTTCCAATGGCATCAATCTCATCGACAAAAATGATA 4406537 Query 16091 GCATGGTTGATTTTCGCGAGCGACTTCAAAGAGATCCCGTACACGCTTGGCGCCCACACC 16150 ||| | || || || || |||| || || || || || || || ||||| Sbjct 4406538 GCAGGAGCCATCTTT-CGGGCCTGGGCAAACAGGTCTCGAACTCGAGAAGCTCCAACACC 4406596 Query 16151 AACAAACATCTCCACAAAGTTTGCGGCGGAACATTGG-ATGAAGGGGACATTAGATTCAC 16209 ||||||||| || ||||| | | | || || | | |||||| ||| | ||||| Sbjct 4406597 AACAAACATTTCAACAAACTCGGATCCAGA-CACGGACAGGAAGGGCACACCGGCTTCAC 4406655 Query 16210 CCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCAC 16269 | ||| |||| ||| | ||||||||||| ||||| || || | |||| || | Sbjct 4406656 CAGCAGTGGCCTTGGCAATCAGAGTCTTACCGGTACCAGGGGGTCCAGAAAGGATAGCTC 4406715 Query 16270 CTCGTGGAATCTTGGCGCCA 16289 |||| || |||||||| ||| Sbjct 4406716 CTCGGGGGATCTTGGCTCCA 4406735 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620742252573680