Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yarrowia_20sp._20JCM_2030694_20[genbank_20GCA_5F001600515.1_202016- 03-01] 19 sequences; 21,758,297 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq3 93.3 5e-14 >seq3 Length=2956712 Score = 93.3 bits (102), Expect = 5e-14 Identities = 122/169 (72%), Gaps = 0/169 (0%) Strand=Plus/Minus Query 157912 CCCCCAGTCATACAGCGAAACGTTCTTGAGAATCCTAGTTGGTACACATCTTACACTCCC 157971 ||||| || || |||||||| || ||||||||||| |||||||| |||||||| ||| Sbjct 984047 CCCCCTGTTATCCAGCGAAATGTGCTTGAGAATCCCCTCTGGTACACCTCTTACACACCC 983988 Query 157972 TATCAAGCTGAGATATCTCAGGGAAGATTGGAAGCTTTATTCAATTACCAAACGCTCATC 158031 || || | ||||| |||||| | |||| || | | || ||||| || |||| Sbjct 983987 TACCAGCCCGAGATCAGTCAGGGTCGTCTGGAGTCTCTCCTGAACTACCAGACCGTCATT 983928 Query 158032 ACAGAACTCACAGGACTACCGATAGCAAACGCATCTCTATTAGATGAAG 158080 || || ||||| ||| | | | || ||||| ||||| | ||||||| Sbjct 983927 ACTGAGCTCACTGGAATGGCCGTCGCCAACGCTTCTCTTCTGGATGAAG 983879 Score = 91.5 bits (100), Expect = 2e-13 Identities = 122/170 (72%), Gaps = 0/170 (0%) Strand=Plus/Minus Query 159610 ATTGTTCATGAGAATGGTGGTCAGGTATATCTTGATGGTGCAAATCTAAATGCACAGGTA 159669 |||||||| ||| ||||||||||| || | |||||||| || | || || ||| | Sbjct 982316 ATTGTTCACCAGAGCGGTGGTCAGGTTTACATGGATGGTGCTAACATGAACGCTCAGATT 982257 Query 159670 GGTCTAGCAAAACCATGTGACTATGGTGCAGATGTATGTCATCTAAACTTACATAAGACA 159729 ||||| | || |||| ||||| ||||| || ||||| ||| | || ||||| Sbjct 982256 GGTCTCACTTCTCCTGGTGAGATGGGTGCTGATGTCTGCCATCTTAACCTCCACAAGACC 982197 Query 159730 TTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATTGGTGT 159779 |||||||| || || || ||||| || || || | || || |||||||| Sbjct 982196 TTCTGTATCCCCCACGGTGGTGGTGGACCCGGAATGGGCCCCATTGGTGT 982147 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588051060337840