Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20sp._20JCM_2030694_20[genbank_20GCA_5F001600515.1_202016-
03-01] 19 sequences; 21,758,297 total letters
Query= NC_015326.1
Length=346754
Score E
Sequences producing significant alignments: (Bits) Value
seq1 170 4e-37
seq2 165 2e-35
>seq1
Length=4845111
Score = 170 bits (188), Expect = 4e-37
Identities = 163/209 (78%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991
|| || ||||| |||||||| || || || |||||||| | ||||||| ||||| ||
Sbjct 2006972 ACGAGATGAAGGGTGGACTCCTTCTGGATGTTGTAATCAGACAGAGTTCGTCCATCCTCA 2007031
Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051
||||||||||| |||||||||||||| || ||||| || ||||| || || ||||| |||
Sbjct 2007032 AGCTGCTTACCGGCGAAGATAAGTCGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCCTGA 2007091
Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111
|| || ||||||||| ||||||||||| ||| || || || ||||| | ||||||
Sbjct 2007092 ATCTTAGACTTGACGTTGTCAATGGTGTCAGAAGACTCAACCTCGAGGGTGATGGTCTTT 2007151
Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140
|| |||| ||| || || || | |||||
Sbjct 2007152 CCAGTCAGAGTCTTGACAAAGATCTGCAT 2007180
Score = 161 bits (178), Expect = 2e-34
Identities = 161/209 (77%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991
|| || || ||||| ||||| || || || ||||| |||| ||||||| |||||||||
Sbjct 2007200 ACCAGATGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGGACAGAGTTCGTCCATCTTCG 2007259
Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051
||||||||||| ||||| || ||||| || ||||| || ||||| || || ||||| |||
Sbjct 2007260 AGCTGCTTACCAGCGAAAATGAGTCGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCCTGA 2007319
Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111
|| || |||||| || ||||||||||| || || || |||||||||| ||||||
Sbjct 2007320 ATCTTGGACTTGACATTGTCAATGGTGTCGGAGGACTCGACCTCAAGGGTAATGGTCTTT 2007379
Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140
|| || | || || ||||| | |||||
Sbjct 2007380 CCAGTGAGGGTCTTCACGAAAATCTGCAT 2007408
Score = 149 bits (164), Expect = 1e-30
Identities = 166/222 (75%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978
|| ||||| | |||||||| |||||||| || || || || || || || | ||| ||
Sbjct 2006536 TCGGAGTCGGAGCACAAGGTGGAGAGTGGATTCCTTCTGGATGTTATAGTCAGAAAGGGT 2006595
Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038
|| || || || ||||||||||| |||||||||||||| || ||||| || || || ||
Sbjct 2006596 TCGTCCGTCCTCAAGCTGCTTACCGGCGAAGATAAGTCGCTGCTGGTCCGGGGGGATACC 2006655
Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098
|| ||||| || || || ||||||||| ||||||||||| || || || |||||
Sbjct 2006656 CTCCTTGTCCTGGATCTTGGACTTGACGTTGTCAATGGTGTCGGAGGACTCAACCTCAAG 2006715
Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
|| | |||||||| |||| ||| || || || | |||||
Sbjct 2006716 AGTGATAGTCTTTCCAGTCAGAGTCTTGACAAAGATCTGCAT 2006757
Score = 149 bits (164), Expect = 1e-30
Identities = 166/222 (75%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978
|| ||||| | ||||| ||||| |||||||| || || || ||||| || | |||||
Sbjct 2007415 TCGGAGTCGGAGGACAAGATGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGACAGAGT 2007474
Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038
|| || || || |||||||| || ||||| || ||||| || ||||| || || || ||
Sbjct 2007475 TCGTCCGTCCTCAAGCTGCTTTCCAGCGAAAATGAGTCGCTGCTGGTCCGGGGGGATTCC 2007534
Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098
|| ||||| ||||| || ||||||||| ||||||||||| ||| || || |||||
Sbjct 2007535 CTCCTTGTCCTGAATCTTGGACTTGACGTTGTCAATGGTGTCAGAAGACTCGACCTCAAG 2007594
Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
||| | ||||| || |||| || || ||||| | |||||
Sbjct 2007595 GGTGATAGTCTTGCCGGTCAGGGTCTTGACGAAGATCTGCAT 2007636
Score = 118 bits (130), Expect = 2e-21
Identities = 125/165 (76%), Gaps = 0/165 (0%)
Strand=Plus/Plus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978
|| ||||| | || || || ||||||||||| || ||||| ||||| |||| || ||
Sbjct 2007643 TCGGAGTCGGAGGACCAGATGGAGAGTGGACTCCTTCTGAATGTTGTAGTCGGAGAGGGT 2007702
Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038
|| ||||| || |||||||| || |||||||| ||||| || ||||| || || || ||
Sbjct 2007703 TCGGCCATCCTCAAGCTGCTTTCCAGCGAAGATGAGTCGCTGCTGGTCCGGGGGGATTCC 2007762
Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGA 195083
|| ||||| ||||| || ||||||||| || || || || ||
Sbjct 2007763 CTCCTTGTCCTGAATCTTGGACTTGACGTTGTCGATAGTATCGGA 2007807
>seq2
Length=4150472
Score = 165 bits (182), Expect = 2e-35
Identities = 171/224 (76%), Gaps = 0/224 (0%)
Strand=Plus/Minus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978
|| ||||| || ||| || || ||||||||||| || || || ||||| || | ||| ||
Sbjct 3070612 TCGGAGTCGCAGAACGAGATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGAAAGGGT 3070553
Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038
|| || || |||||||||||||| |||||||||||||| || ||||| || ||||| ||
Sbjct 3070552 TCGGCCGTCCTCGAGCTGCTTACCGGCGAAGATAAGTCGCTGCTGGTCCGGGGGAATTCC 3070493
Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098
|| ||||| || || || ||||||||| || |||||||| ||| ||||| |||||
Sbjct 3070492 CTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACCTCAAG 3070433
Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCATTT 195142
||| | ||||| || || | || || || || | |||||||
Sbjct 3070432 GGTGATAGTCTTACCGGTAAGGGTCTTGACAAAAATCTGCATTT 3070389
Score = 159 bits (176), Expect = 8e-34
Identities = 168/221 (76%), Gaps = 0/221 (0%)
Strand=Plus/Plus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978
|| ||||| || |||||| || ||||||||||| || || || ||||| || | |||||
Sbjct 3374814 TCGGAGTCGCAGAACAAGATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGAGT 3374873
Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038
|| || || ||||||||||| || ||||| || ||||| || ||||| || ||||||||
Sbjct 3374874 TCGGCCGTCCTCGAGCTGCTTGCCGGCGAAAATGAGTCGCTGCTGGTCCGGGGGAATGCC 3374933
Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098
|| ||||| || || || ||||||||| ||||||||||| ||| ||||| || ||
Sbjct 3374934 CTCCTTGTCCTGGATCTTGGACTTGACGTTGTCAATGGTGTCGGAAGACTCCACCTCGAG 3374993
Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCA 195139
||| | ||||| || || | || || || || | |||||
Sbjct 3374994 GGTGATGGTCTTGCCAGTAAGGGTCTTGACAAAGATTTGCA 3375034
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1109481329910573
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |