Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20sp._20JCM_2030694_20[genbank_20GCA_5F001600515.1_202016-
03-01] 19 sequences; 21,758,297 total letters
Query= NC_015398.1
Length=101487
Score E
Sequences producing significant alignments: (Bits) Value
seq1 125 5e-24
seq2 93.3 3e-14
>seq1
Length=4845111
Score = 125 bits (138), Expect = 5e-24
Identities = 143/192 (74%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850
|| ||||| ||||| || || || || ||||| |||| || ||||| || ||||| ||
Sbjct 2006990 TCCTTCTGGATGTTGTAATCAGACAGAGTTCGTCCATCCTCAAGCTGCTTACCGGCGAAG 2007049
Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910
|| ||||| |||||||| | || | ||||||||||| |||||| ||||||
Sbjct 2007050 ATAAGTCGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCCTGAATCTTAGACTTGACGTTG 2007109
Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970
| || | ||| | |||||| |||| ||| ||||| ||||| || |||||||| |||
Sbjct 2007110 TCAATGGTGTCAGAAGACTCAACCTCGAGGGTGATGGTCTTTCCAGTCAGAGTCTTGACA 2007169
Query 34971 AAGATCTGCATA 34982
||||||||||||
Sbjct 2007170 AAGATCTGCATA 2007181
Score = 123 bits (136), Expect = 2e-23
Identities = 143/193 (74%), Gaps = 0/193 (0%)
Strand=Plus/Plus
Query 34790 TTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAA 34849
||| ||||| ||||||||||| |||||| ||||| | || || ||||| || ||||| ||
Sbjct 2006566 TTCCTTCTGGATGTTATAGTCAGAAAGGGTTCGTCCGTCCTCAAGCTGCTTACCGGCGAA 2006625
Query 34850 TATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGA 34909
|| ||||| |||||||| | || | ||||||||||| ||||| ||||||
Sbjct 2006626 GATAAGTCGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCTTGGACTTGACGTT 2006685
Query 34910 TGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCAC 34969
| || | || || |||||| || | || || || ||||| || |||||||| ||
Sbjct 2006686 GTCAATGGTGTCGGAGGACTCAACCTCAAGAGTGATAGTCTTTCCAGTCAGAGTCTTGAC 2006745
Query 34970 AAAGATCTGCATA 34982
|||||||||||||
Sbjct 2006746 AAAGATCTGCATA 2006758
Score = 107 bits (118), Expect = 1e-18
Identities = 139/192 (72%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850
|| ||||| ||||| ||||| || || ||||| |||| || ||||| || || || ||
Sbjct 2007218 TCCTTCTGGATGTTGTAGTCGGACAGAGTTCGTCCATCTTCGAGCTGCTTACCAGCGAAA 2007277
Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910
|| ||||| |||||||| | || | ||||||||||| |||||| |||||
Sbjct 2007278 ATGAGTCGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCCTGAATCTTGGACTTGACATTG 2007337
Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970
| || | || || ||| || || | ||| ||||| ||||| ||||| ||||||||
Sbjct 2007338 TCAATGGTGTCGGAGGACTCGACCTCAAGGGTAATGGTCTTTCCAGTGAGGGTCTTCACG 2007397
Query 34971 AAGATCTGCATA 34982
|| |||||||||
Sbjct 2007398 AAAATCTGCATA 2007409
Score = 98.7 bits (108), Expect = 6e-16
Identities = 137/192 (71%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850
|| ||||| ||||| ||||| || || ||||| | || || ||||| ||||| || ||
Sbjct 2007446 TCCTTCTGGATGTTGTAGTCAGACAGAGTTCGTCCGTCCTCAAGCTGCTTTCCAGCGAAA 2007505
Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910
|| ||||| |||||||| | || | ||||||||||| |||||| ||||||
Sbjct 2007506 ATGAGTCGCTGCTGGTCCGGGGGGATTCCCTCCTTGTCCTGAATCTTGGACTTGACGTTG 2007565
Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970
| || | ||| | ||| || || | ||| || || || || || || ||||| ||
Sbjct 2007566 TCAATGGTGTCAGAAGACTCGACCTCAAGGGTGATAGTCTTGCCGGTCAGGGTCTTGACG 2007625
Query 34971 AAGATCTGCATA 34982
||||||||||||
Sbjct 2007626 AAGATCTGCATA 2007637
Score = 86.0 bits (94), Expect = 4e-12
Identities = 83/107 (78%), Gaps = 0/107 (0%)
Strand=Plus/Plus
Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850
|| ||||||||||| ||||| || ||| |||| |||| || ||||| ||||| || ||
Sbjct 2007674 TCCTTCTGAATGTTGTAGTCGGAGAGGGTTCGGCCATCCTCAAGCTGCTTTCCAGCGAAG 2007733
Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTT 34897
|| ||||| |||||||| | || | ||||||||||| ||||||
Sbjct 2007734 ATGAGTCGCTGCTGGTCCGGGGGGATTCCCTCCTTGTCCTGAATCTT 2007780
>seq2
Length=4150472
Score = 93.3 bits (102), Expect = 3e-14
Identities = 139/196 (71%), Gaps = 1/196 (1%)
Strand=Plus/Minus
Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850
|| ||||| ||||| ||||| |||||| |||| | || || ||||| || ||||| ||
Sbjct 3070581 TCCTTCTGGATGTTGTAGTCAGAAAGGGTTCGGCCGTCCTCGAGCTGCTTACCGGCGAAG 3070522
Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910
|| ||||| |||||||| | || | ||||||||||| ||||| ||||||
Sbjct 3070521 ATAAGTCGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCCTGGATCTTGGACTTGACGTTG 3070462
Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970
| || | || | ||| || || | ||| || || || || || || ||||| |||
Sbjct 3070461 TCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATAGTCTTACCGGTAAGGGTCTTGACA 3070402
Query 34971 AAGATCTGCATATTCG 34986
|| |||||||| ||||
Sbjct 3070401 AAAATCTGCAT-TTCG 3070387
Score = 91.5 bits (100), Expect = 1e-13
Identities = 134/190 (71%), Gaps = 0/190 (0%)
Strand=Plus/Plus
Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850
|| ||||| ||||| ||||| || || |||| | || || ||||| || ||||| ||
Sbjct 3374845 TCCTTCTGGATGTTGTAGTCAGAGAGAGTTCGGCCGTCCTCGAGCTGCTTGCCGGCGAAA 3374904
Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910
|| ||||| |||||||| | || | ||||||||||| ||||| ||||||
Sbjct 3374905 ATGAGTCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTG 3374964
Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970
| || | || | ||| || |||| ||| ||||| || || || || ||||| |||
Sbjct 3374965 TCAATGGTGTCGGAAGACTCCACCTCGAGGGTGATGGTCTTGCCAGTAAGGGTCTTGACA 3375024
Query 34971 AAGATCTGCA 34980
||||| ||||
Sbjct 3375025 AAGATTTGCA 3375034
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 324633524827032
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |