Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20sp._20JCM_2030694_20[genbank_20GCA_5F001600515.1_202016-
03-01] 19 sequences; 21,758,297 total letters
Query= NC_018875.1
Length=119082
Score E
Sequences producing significant alignments: (Bits) Value
seq1 111 1e-19
seq2 100 2e-16
>seq1
Length=4845111
Score = 111 bits (122), Expect = 1e-19
Identities = 147/204 (72%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 48563 ATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTG 48622
||| || ||| ||| || || || ||||||||||| ||| |||| | || || | |||
Sbjct 2006977 ATGAAGGGTGGACTCCTTCTGGATGTTGTAATCAGACAGAGTTCGTCCATCCTCAAGCTG 2007036
Query 48623 CTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTT 48682
||||||||| || || |||||||| || |||| ||||| ||||||||||| ||||||
Sbjct 2007037 CTTACCGGCGAAGATAAGTCGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCCTGAATCTT 2007096
Query 48683 TTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGT 48742
|| || | | | || || | ||| ||||| | || || || ||||| ||
Sbjct 2007097 AGACTTGACGTTGTCAATGGTGTCAGAAGACTCAACCTCGAGGGTGATGGTCTTTCCAGT 2007156
Query 48743 CAAAGTTTTTACAAAAATCTGCAT 48766
|| ||| || ||||| ||||||||
Sbjct 2007157 CAGAGTCTTGACAAAGATCTGCAT 2007180
Score = 98.7 bits (108), Expect = 8e-16
Identities = 147/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 48558 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCC 48617
|||| ||| || || ||| || || || ||||| || || ||| |||| | || ||
Sbjct 2007200 ACCAGATGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGGACAGAGTTCGTCCATCTTCG 2007259
Query 48618 AACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTA 48677
| ||||||||| || || || |||||||| || |||| ||||| ||||||||||| |
Sbjct 2007260 AGCTGCTTACCAGCGAAAATGAGTCGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCCTGA 2007319
Query 48678 ATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTT 48737
||||| || ||| | | | || || | ||| ||||| | ||||| || |||
Sbjct 2007320 ATCTTGGACTTGACATTGTCAATGGTGTCGGAGGACTCGACCTCAAGGGTAATGGTCTTT 2007379
Query 48738 CCCGTCAAAGTTTTTACAAAAATCTGCAT 48766
|| || | || || || |||||||||||
Sbjct 2007380 CCAGTGAGGGTCTTCACGAAAATCTGCAT 2007408
Score = 87.8 bits (96), Expect = 1e-12
Identities = 134/191 (70%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 48576 TCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAAT 48635
|| || || || || || ||||| || |||| |||| || | |||||||||||| ||
Sbjct 2006567 TCCTTCTGGATGTTATAGTCAGAAAGGGTTCGTCCGTCCTCAAGCTGCTTACCGGCGAAG 2006626
Query 48636 ATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAA 48695
|| |||||||| || |||| ||| | ||||||||||| ||||| || ||
Sbjct 2006627 ATAAGTCGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCTTGGACTTGACGTTG 2006686
Query 48696 CCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACA 48755
| | | || || | ||| ||||| | || || || ||||| |||| ||| || |||
Sbjct 2006687 TCAATGGTGTCGGAGGACTCAACCTCAAGAGTGATAGTCTTTCCAGTCAGAGTCTTGACA 2006746
Query 48756 AAAATCTGCAT 48766
|| ||||||||
Sbjct 2006747 AAGATCTGCAT 2006757
Score = 84.2 bits (92), Expect = 2e-11
Identities = 141/204 (69%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 48563 ATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTG 48622
||| || ||| ||| || || || ||||| ||||| ||| |||| |||| || | |||
Sbjct 2007433 ATGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGACAGAGTTCGTCCGTCCTCAAGCTG 2007492
Query 48623 CTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTT 48682
||| || || || || |||||||| || |||| ||| | ||||||||||| ||||||
Sbjct 2007493 CTTTCCAGCGAAAATGAGTCGCTGCTGGTCCGGGGGGATTCCCTCCTTGTCCTGAATCTT 2007552
Query 48683 TTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGT 48742
|| || | | | || || | ||| ||||| | || || || || || ||
Sbjct 2007553 GGACTTGACGTTGTCAATGGTGTCAGAAGACTCGACCTCAAGGGTGATAGTCTTGCCGGT 2007612
Query 48743 CAAAGTTTTTACAAAAATCTGCAT 48766
|| || || || || ||||||||
Sbjct 2007613 CAGGGTCTTGACGAAGATCTGCAT 2007636
>seq2
Length=4150472
Score = 100 bits (110), Expect = 2e-16
Identities = 153/218 (70%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608
|| |||| || | ||| || ||| ||| || || || ||||| ||||| || ||||
Sbjct 3070608 AGTCGCAGAACGAGATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGAAAGGGTTCGG 3070549
Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668
|||| || | |||||||||||| || || |||||||| || |||| ||||| ||||||
Sbjct 3070548 CCGTCCTCGAGCTGCTTACCGGCGAAGATAAGTCGCTGCTGGTCCGGGGGAATTCCCTCC 3070489
Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728
||||| ||||| || || | | | || || | ||||||||| | ||
Sbjct 3070488 TTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTG 3070429
Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766
|| || || || || | || || ||||||||||||||
Sbjct 3070428 ATAGTCTTACCGGTAAGGGTCTTGACAAAAATCTGCAT 3070391
Score = 95.1 bits (104), Expect = 9e-15
Identities = 96/125 (77%), Gaps = 0/125 (0%)
Strand=Plus/Plus
Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608
|| |||| || | ||| || ||| ||| || || || ||||| ||||| ||| ||||
Sbjct 3374818 AGTCGCAGAACAAGATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGAGTTCGG 3374877
Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668
|||| || | |||||| ||||| || || |||||||| || |||| ||||| |||||||
Sbjct 3374878 CCGTCCTCGAGCTGCTTGCCGGCGAAAATGAGTCGCTGCTGGTCCGGGGGAATGCCCTCC 3374937
Query 48669 TTGTC 48673
|||||
Sbjct 3374938 TTGTC 3374942
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 380937511789137
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |