Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yarrowia_20sp._20JCM_2030694_20[genbank_20GCA_5F001600515.1_202016- 03-01] 19 sequences; 21,758,297 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq2 470 3e-127 seq6 241 2e-58 >seq2 Length=4150472 Score = 470 bits (520), Expect = 3e-127 Identities = 1242/1875 (66%), Gaps = 56/1875 (3%) Strand=Plus/Minus Query 212556 GTAAACTGTACTGGATCAGCAGCAGCCTTGGTGCGTAGATAGTACATGCCGGTCTTTAGG 212615 || ||||| | || |||| |||||| |||| || || |||||||| |||||||| || Sbjct 326334 GTGAACTGGATGGGGGCAGCGGCAGCCATGGTTCGCAGGTAGTACATACCGGTCTTGAGA 326275 Query 212616 CCCTTGCCCCAGCCGTGCATGTGCATTGCTGTGAGTTTCTTCAGCTTAATATTCTGGTCA 212675 ||||| |||||||| | |||||| | ||||| || || | ||| | Sbjct 326274 CCCTTCTTCCAGCCGTAGAAGTGCATGGAAGTGAGCTTACCCA--------TGGTGGGC- 326224 Query 212676 TCCTCGTGGCCCAGATGTAGGTTCAGGGACTGACTCTGGTCTATGAATGGGGCCCTGTCA 212735 |||| | | || | ||| |||||||| |||||| ||||| || | | ||| Sbjct 326223 TCCTTGATG------TGAATGTTGAGGGACTGGGACTGGTCAATGAAGGGAGATCGGTCG 326170 Query 212736 GCGGCCATGTCTATGATATCTCT-CTGGGAGAGCTCCCACACGGTCTTGAAGATTTCTTT 212794 |||||||| || ||||| || || |||||| | |||||||||||||||| | | || || Sbjct 326169 GCGGCCATCTCGATGAT-TCGCTTCTGGGAAATCTCCCACACGGTCTTGTACAGCTCCTT 326111 Query 212795 GAGGTCCTCTGGGAAGCCGGGGATGTTCTGCACAGACCCCCTGTGTATGGTCAGCTGCAG 212854 || |||| |||| | ||||||||||||||| || || ||| | | | Sbjct 326110 GATCTCCTGGGGGATGTTGGGGATGTTCTGCACGGATCCGTTGTCGGCGACAATTCGGTT 326051 Query 212855 GCGCATGTCCTCGTTCCAGAGGCC--CCTGGTCTCCAGGCACTTGACCAGGTGAGGGTTG 212912 ||| |||||||||||| || ||| | ||| ||||| || |||||| Sbjct 326050 CTTCATAGTCTCGTTCCAGAGACCGACCTCAACA--AGGTCCTTGAGAAGCCAGGGGTTG 325993 Query 212913 ACTATCTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTAGGGCTCG 212972 || |||||||| ||||| | || || | | ||||| ||| || ||||| |||||| Sbjct 325992 ACAATCTGGAACTCACCGGCAAGAACTCGTCGAGAGTAAATGTTGGAGGTGTAAGGCTCG 325933 Query 212973 ATGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGCCACCAGG 213032 | || ||||||| || |||||||| | || || |||||||| ||||| ||||| Sbjct 325932 AAGCACTCGTTGAAGCCGAGAATCTGAGAGGTAGAAGCAGTGGGCATAGGAGCGACCAGC 325873 Query 213033 AGACTGTTCCTCACTCCGTGCTCGCCGATGAGGCGCCGAAGCTCTGCCCAGTCCCATCTG 213092 ||| ||| | || ||||||| | | | | | || || |||||| || Sbjct 325872 AGAGAGTTTCGCAGACCGTGCTTGACAACCTTGGACTTGAGGTC------GTCCCA-CTC 325820 Query 213093 CCAGACAGGTCCTCGTCCTTCACGTTCCACATGTCAAACTGCAAGATGCCTTTGCTCACG 213152 ||||| | || | |||||||||||||| ||||||| | || ||| | Sbjct 325819 CCAGA--GCTCGGTGGGGGAAACGTTCCACATGTCGAACTGCAGGTCTCCCTTGGAGGCA 325762 Query 213153 GGGCTGCCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTCGCAGGACGCCTGC 213212 || ||||||| | | ||||| || | ||| |||||| ||| || |||| Sbjct 325761 GGAGAGCCCTGGAAGGTCTCGTAGGCACCCTCCTCAATGGCCATCTCCATAGAGGCCTCG 325702 Query 213213 AGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTGAGCTTCTTGGCCTCTGGGGAC 213272 | ||| ||| ||||||||| || || |||| ||||||||||||||||||| |||| Sbjct 325701 ACGGCTCCGTGGTAGATGGTCTCGAAGATCTGGATGTTGAGCTTCTTGGCCTCGTCGGAC 325642 Query 213273 GTGAAGGGCATCATCAT-GCGTTGGAACACATCAGCCAGCCCCTGGACCCCGATGCCGAT 213331 ||||| | || || || || ||||||||| |||||||| || | |||| Sbjct 325641 TCAAAGGGGAGACGCAGAGCCATG-AAGGTATCAGCCAGACCCTGGACACCCAGAGCGAT 325583 Query 213332 GGGTCTGTGTCTCAGGTTAGACTTGGAGCACTCCTCCAAGGGGTAAAAGTTGCAGTCGAT 213391 ||||| ||||| || ||| ||||| | ||| | |||||| |||| | |||||| Sbjct 325582 GGGTCGGTGTCGCATGTTGGACTTCTTGGCCTCGGGAACGGGGTAGTAGTTTCGGTCGAT 325523 Query 213392 GATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGACATGGGCCAGGTACTCG---TGATT 213448 ||| ||||||||| || || |||| | || ||| | || | | | Sbjct 325522 GATGGCGTTGAGGTTTCGCACAATGACCTTGGCAATATCATGCAGCTTCTTGAAGTCGTA 325463 Query 213449 GAACACGTAGCCCCCGTCCTG---CACAAACTCAGGCAGGGCGATGCTGGCCAGGTTGCA 213505 |||| || | | |||| | ||| || ||||| || ||| |||||||||||| Sbjct 325462 GAACGAGTTGGTCTCGTCTCGAGTCACGAAAGTGGGCAGAGCAATGGAGGCCAGGTTGCA 325403 Query 213506 AACGGCCACCTCCT-GAGAGTCTGTGTACTCCATGATCTCGGTGCACAGGTTGCTGCATC 213564 ||||| ||||| | | ||| | |||||| | |||||| ||||||||| | Sbjct 325402 GACGGCAACCTCATCGGGAGAA-GAGTACTCGACAATCTCGCAACACAGGTTGGAAGACT 325344 Query 213565 GGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCAGAATCCTTGTAGAGCATGT 213624 |||||| |||||||||| ||||| |||||| |||| || ||||||||||||||| Sbjct 325343 TGATGGTTCCCAGGTTCTTCTGGTTGGACTTTCGGTTGCAGGAGTCCTTGTAGAGCATGA 325284 Query 213625 AGGGGGACCCGGTCTCTAGCTGGGACACCAGTATCTGGCTCCAGAGGTACCTGGCCTTGA 213684 ||||| |||| ||| |||| | | || || ||| ||| || | | ||| || Sbjct 325283 AGGGGTTTCCGGACTCGGTCTGGCAGTCGAGAATGTGGTACCACAGCTTCTGGGCGGGGA 325224 Query 213685 CCACCCGCCTGACAGCTCCGGGCGTAGCCTCGTACTGTTCGTAGAGCTCGTTGAATTCGT 213744 || | | | ||| | || |||||||| ||||| |||| ||||| |||| Sbjct 325223 TGGTTCGTCGGCCTCGTCCCTC--TCGC-TCGTACTGCTCGTACAGCTTCTTGAACTCGT 325167 Query 213745 GGCCCCAGACCCTGTCCAGTCCCGGACAGGATGCGGGACACATGAGGCTCCAGTCCCCGT 213804 || |||| ||| || || || || ||| ||||||||| |||| || |||| Sbjct 325166 CACCGTAGACGTCGTCAAGACCGGGGCACTCGTTGGGGCACATGAGGGTCCACTCGCCGT 325107 Query 213805 CAT-CTCTGACTCTCTGCATGAACAGGTCCGGGACCCACAGCGCGGTGAACAGGTCCCTG 213863 | ||| ||||| || |||||||||||| || | |||||| || ||||||||| | | Sbjct 325106 TCTGCTC-GACTCGCTCCATGAACAGGTCGGGAATCCACAGGGCCAGGAACAGGTCTCGG 325048 Query 213864 GTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAAAGTCAAAGATGTCCGCG 213923 | | |||| ||| ||| ||| || ||||| || || || |||||||| || Sbjct 325047 GCTCGGATCTCCTCCTTTCCGTGGTTCTTTCGCAGCTCGCAGAACTCGAAGATGTCGTCG 324988 Query 213924 TGCCACGGCTCCATGTAGATGGCAAAGGCGCCCGGCCTCTTG---CCGCCCTGGTCCACC 213980 ||||| ||||| | ||| ||||||||||| || || | |||| || |||||||| || Sbjct 324987 TGCCAAGGCTCAAGGTACATGGCAAAGGCTCCGGGTCGCTTGTTACCACCCTGGTCAACG 324928 Query 213981 AGCCTGGCCACCATGTTGAAGATGCGCAGGACGGGTACCAGCCCGTTGGACTGTCCGTTG 214040 | ||| ||||| ||| || || | ||| || | |||||||| |||||| Sbjct 324927 TATCGGGCAGTGTTGTTGTAGACTCGGAGCATGGGCACGATACCGTTGGAGGTACCGTTG 324868 Query 214041 GTTCCCGCTATATACGAGCCGGAGGCCCTCAGGTTGCTCATGGAGAGCCCTATGCCACCG 214100 || || || || || ||||||| ||| | | |||| |||||||| || || || ||| Sbjct 324867 GTGCCGGCAATGTAGGAGCCGGTGGCTCGAATGTTGTGGATGGAGAGACCGATACCTCCG 324808 Query 214101 GCGTACTTGGAGATCATGGCGCAGCGCCTCACAGTCTCCATGATGCCGGCCATGCTGTCA 214160 || |||||||||| | || ||| | | | || || ||||||| | ||| ||| Sbjct 324807 GCAGACTTGGAGATGAGAGCACAGGTCTTGAGGGTATCGTAGATGCCGTCGATGGAGTCG 324748 Query 214161 TCTGTGAGGTTCAGCAAGAAGCAGCTCGAGAGCTGGGGCCTGGACGAGCCAGAGTTGAAA 214220 || | | ||| | | ||| || || | ||||||| || | |||| |||| | Sbjct 324747 TCCTTCATGTTGACGAGGAAACACGAAGACATCTGGGGCTGGGGGGTTCCAGCGTTGTAG 324688 Query 214221 AGCGTGGGGCTGGCATGGATCATAAACTTGTTAGAGAGGAGCCTGTAGGTCTCCAGGACT 214280 || |||||| || ||| | | |||| | || | | |||||||||| | | | Sbjct 324687 AGAGTGGGGGAAGCGTGGGTGAAGTACTTCTGGGACATGTAGTTGTAGGTCTCAATGGCC 324628 Query 214281 GAGGGGATGTCGTGCTTGTGGATCTGTAGAGCGCACCTCATCAGCATGTGCTGGGGCCTC 214340 || |||| || |||||| | || | | ||| | ||| |||||||| | | Sbjct 324627 CGGGCAATGTTGTCACCGTGGATACCGACAGAGACTCGCATGATCATCTGCTGGGGTCGC 324568 Query 214341 T---CTATGGGTCCTTTGGGGCCCTTG-AGCAGGTAGGAGCGCTCCAGAGTCTTGAACCC 214396 | | | | ||| ||| || | |||||||| | |||||||| |||||||| || Sbjct 324567 TCGGCAACAGCTCCGTTG----ACTCGAAGCAGGTATGCTCGCTCCAGGGTCTTGAAGCC 324512 Query 214397 AAAGTAGGAGTAGGT 214411 ||||||| |||||| Sbjct 324511 AAAGTAGTTGTAGGT 324497 >seq6 Length=2655350 Score = 241 bits (266), Expect = 2e-58 Identities = 496/733 (68%), Gaps = 11/733 (2%) Strand=Plus/Minus Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898 ||||||||| ||||| ||||| |||||||| ||||| || ||| || |||||||| Sbjct 575198 CTGGTAGTCAGACACTCGCTTCTCGAAGAAGTTGGTCTTTCCAGCCAGAGAAATGTTCTC 575139 Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACACCCGTGTCAGGCCCATCTGTTCCAGCAG 47958 ||||||| |||||||||| | ||| || ||| | || | | ||||| Sbjct 575138 CATGAAGTCAAAGGGGTTGGTGGAGTTGTAGACCTTGGGGTTTCCAAGAGCAACAAGCAG 575079 Query 47959 GTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGG- 48017 | || || || |||| ||||| | | |||||| || |||||| || | || Sbjct 575078 ACGGTCGGCCACAAACTCAATGTACTGTCGCATGAGCTTGGCGTTCATACCGAGCAGACC 575019 Query 48018 ACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATCT 48077 ||| ||| | ||| | || || ||||||| ||| || || || || | | | | Sbjct 575018 ACAAGGG-AGAGCATCAGTAAGGAACTCCTGCTCAATGCCAACAGCCTCGACAATGACGT 574960 Query 48078 GCTTAACGCGGGACTCTGAGGGTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAGGCAA 48137 || || || |||||| ||| ||||| | |||||| ||||||| Sbjct 574959 CCTCGACAATCTTCTTGGAGGGTCGGTTCTCGAGGTGAGAGA---AGAGCAGACAGGCAA 574903 Query 48138 AGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGGCA 48197 |||| |||||| || || || || |||||| ||||||||||| || ||||||| Sbjct 574902 AGTCGGTGTGCAGACCCTCATCTCGAGAAATGAGCTCGTTGGAGAAGGTCAGGCCAGGCA 574843 Query 48198 TGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCCCT 48257 ||| || | || |||||||||||||| | || ||||| || |||||||| || |||| Sbjct 574842 TGAGACCTCGCTTCTTGAGCCAGAAAATGGAGGCAAAAGATCCGGAGAAGAAAATACCCT 574783 Query 48258 CCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGATCCAGG 48317 | || || || || ||| | || | ||| || || | || | | ||| |||||||| Sbjct 574782 CAACGGCAGCAAAGGCGATAAGTCGCTCGCCAAAGGTAGACTCGTCGTCGGAGATCCACT 574723 Query 48318 AAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGGAAGAGCT 48377 || |||||||| ||||||||||||||||| || || ||||| ||||| ||| || | Sbjct 574722 TGAGAGCCCAGTCGGCCTTCTTCTTGATGCAGGGAATGGTCTCAATGGCGTTGAACAGGT 574663 Query 48378 TCTTGCACTCACCTGCGTCCGCAACATAGGT---AGTGAGCAGCTTTGCGTACATCTCAG 48434 | | ||| | |||| | || || | ||||||| | ||| |||| | Sbjct 574662 AAGTTCGCTCCTTGGGGTCCTTGATGTAAGTATCAATGAGCAG---AGAGTAGGTCTCGG 574606 Query 48435 AGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACACCTGCA 48494 | || | ||||| || ||||||||| ||||||||| | |||||||| |||| | Sbjct 574605 AATGGATGTTCTCCATCATGATCTGGAATCCGTAGAAGCACTTGGCCTCAGGAGCCTGAA 574546 Query 48495 CTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAGCAAAGA 48554 | ||| ||||| | ||| | ||| ||||| ||||| || || || || |||||||||| Sbjct 574545 CCTCTCCAGAGAACCGCTCAACCAGGTTCTCGTTGACAATACCGTCAGAGGCAGCAAAGA 574486 Query 48555 AGGCAAGGACATG 48567 | || || || || Sbjct 574485 AAGCCAGCACGTG 574473 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931532578760960