Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20sp._20JCM_2030694_20[genbank_20GCA_5F001600515.1_202016-
03-01] 19 sequences; 21,758,297 total letters
Query= NC_019491.1
Length=291144
Score E
Sequences producing significant alignments: (Bits) Value
seq2 470 3e-127
seq6 241 2e-58
>seq2
Length=4150472
Score = 470 bits (520), Expect = 3e-127
Identities = 1242/1875 (66%), Gaps = 56/1875 (3%)
Strand=Plus/Minus
Query 212556 GTAAACTGTACTGGATCAGCAGCAGCCTTGGTGCGTAGATAGTACATGCCGGTCTTTAGG 212615
|| ||||| | || |||| |||||| |||| || || |||||||| |||||||| ||
Sbjct 326334 GTGAACTGGATGGGGGCAGCGGCAGCCATGGTTCGCAGGTAGTACATACCGGTCTTGAGA 326275
Query 212616 CCCTTGCCCCAGCCGTGCATGTGCATTGCTGTGAGTTTCTTCAGCTTAATATTCTGGTCA 212675
||||| |||||||| | |||||| | ||||| || || | ||| |
Sbjct 326274 CCCTTCTTCCAGCCGTAGAAGTGCATGGAAGTGAGCTTACCCA--------TGGTGGGC- 326224
Query 212676 TCCTCGTGGCCCAGATGTAGGTTCAGGGACTGACTCTGGTCTATGAATGGGGCCCTGTCA 212735
|||| | | || | ||| |||||||| |||||| ||||| || | | |||
Sbjct 326223 TCCTTGATG------TGAATGTTGAGGGACTGGGACTGGTCAATGAAGGGAGATCGGTCG 326170
Query 212736 GCGGCCATGTCTATGATATCTCT-CTGGGAGAGCTCCCACACGGTCTTGAAGATTTCTTT 212794
|||||||| || ||||| || || |||||| | |||||||||||||||| | | || ||
Sbjct 326169 GCGGCCATCTCGATGAT-TCGCTTCTGGGAAATCTCCCACACGGTCTTGTACAGCTCCTT 326111
Query 212795 GAGGTCCTCTGGGAAGCCGGGGATGTTCTGCACAGACCCCCTGTGTATGGTCAGCTGCAG 212854
|| |||| |||| | ||||||||||||||| || || ||| | | |
Sbjct 326110 GATCTCCTGGGGGATGTTGGGGATGTTCTGCACGGATCCGTTGTCGGCGACAATTCGGTT 326051
Query 212855 GCGCATGTCCTCGTTCCAGAGGCC--CCTGGTCTCCAGGCACTTGACCAGGTGAGGGTTG 212912
||| |||||||||||| || ||| | ||| ||||| || ||||||
Sbjct 326050 CTTCATAGTCTCGTTCCAGAGACCGACCTCAACA--AGGTCCTTGAGAAGCCAGGGGTTG 325993
Query 212913 ACTATCTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTAGGGCTCG 212972
|| |||||||| ||||| | || || | | ||||| ||| || ||||| ||||||
Sbjct 325992 ACAATCTGGAACTCACCGGCAAGAACTCGTCGAGAGTAAATGTTGGAGGTGTAAGGCTCG 325933
Query 212973 ATGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGCCACCAGG 213032
| || ||||||| || |||||||| | || || |||||||| ||||| |||||
Sbjct 325932 AAGCACTCGTTGAAGCCGAGAATCTGAGAGGTAGAAGCAGTGGGCATAGGAGCGACCAGC 325873
Query 213033 AGACTGTTCCTCACTCCGTGCTCGCCGATGAGGCGCCGAAGCTCTGCCCAGTCCCATCTG 213092
||| ||| | || ||||||| | | | | | || || |||||| ||
Sbjct 325872 AGAGAGTTTCGCAGACCGTGCTTGACAACCTTGGACTTGAGGTC------GTCCCA-CTC 325820
Query 213093 CCAGACAGGTCCTCGTCCTTCACGTTCCACATGTCAAACTGCAAGATGCCTTTGCTCACG 213152
||||| | || | |||||||||||||| ||||||| | || ||| |
Sbjct 325819 CCAGA--GCTCGGTGGGGGAAACGTTCCACATGTCGAACTGCAGGTCTCCCTTGGAGGCA 325762
Query 213153 GGGCTGCCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTCGCAGGACGCCTGC 213212
|| ||||||| | | ||||| || | ||| |||||| ||| || ||||
Sbjct 325761 GGAGAGCCCTGGAAGGTCTCGTAGGCACCCTCCTCAATGGCCATCTCCATAGAGGCCTCG 325702
Query 213213 AGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTGAGCTTCTTGGCCTCTGGGGAC 213272
| ||| ||| ||||||||| || || |||| ||||||||||||||||||| ||||
Sbjct 325701 ACGGCTCCGTGGTAGATGGTCTCGAAGATCTGGATGTTGAGCTTCTTGGCCTCGTCGGAC 325642
Query 213273 GTGAAGGGCATCATCAT-GCGTTGGAACACATCAGCCAGCCCCTGGACCCCGATGCCGAT 213331
||||| | || || || || ||||||||| |||||||| || | ||||
Sbjct 325641 TCAAAGGGGAGACGCAGAGCCATG-AAGGTATCAGCCAGACCCTGGACACCCAGAGCGAT 325583
Query 213332 GGGTCTGTGTCTCAGGTTAGACTTGGAGCACTCCTCCAAGGGGTAAAAGTTGCAGTCGAT 213391
||||| ||||| || ||| ||||| | ||| | |||||| |||| | ||||||
Sbjct 325582 GGGTCGGTGTCGCATGTTGGACTTCTTGGCCTCGGGAACGGGGTAGTAGTTTCGGTCGAT 325523
Query 213392 GATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGACATGGGCCAGGTACTCG---TGATT 213448
||| ||||||||| || || |||| | || ||| | || | | |
Sbjct 325522 GATGGCGTTGAGGTTTCGCACAATGACCTTGGCAATATCATGCAGCTTCTTGAAGTCGTA 325463
Query 213449 GAACACGTAGCCCCCGTCCTG---CACAAACTCAGGCAGGGCGATGCTGGCCAGGTTGCA 213505
|||| || | | |||| | ||| || ||||| || ||| ||||||||||||
Sbjct 325462 GAACGAGTTGGTCTCGTCTCGAGTCACGAAAGTGGGCAGAGCAATGGAGGCCAGGTTGCA 325403
Query 213506 AACGGCCACCTCCT-GAGAGTCTGTGTACTCCATGATCTCGGTGCACAGGTTGCTGCATC 213564
||||| ||||| | | ||| | |||||| | |||||| ||||||||| |
Sbjct 325402 GACGGCAACCTCATCGGGAGAA-GAGTACTCGACAATCTCGCAACACAGGTTGGAAGACT 325344
Query 213565 GGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCAGAATCCTTGTAGAGCATGT 213624
|||||| |||||||||| ||||| |||||| |||| || |||||||||||||||
Sbjct 325343 TGATGGTTCCCAGGTTCTTCTGGTTGGACTTTCGGTTGCAGGAGTCCTTGTAGAGCATGA 325284
Query 213625 AGGGGGACCCGGTCTCTAGCTGGGACACCAGTATCTGGCTCCAGAGGTACCTGGCCTTGA 213684
||||| |||| ||| |||| | | || || ||| ||| || | | ||| ||
Sbjct 325283 AGGGGTTTCCGGACTCGGTCTGGCAGTCGAGAATGTGGTACCACAGCTTCTGGGCGGGGA 325224
Query 213685 CCACCCGCCTGACAGCTCCGGGCGTAGCCTCGTACTGTTCGTAGAGCTCGTTGAATTCGT 213744
|| | | | ||| | || |||||||| ||||| |||| ||||| ||||
Sbjct 325223 TGGTTCGTCGGCCTCGTCCCTC--TCGC-TCGTACTGCTCGTACAGCTTCTTGAACTCGT 325167
Query 213745 GGCCCCAGACCCTGTCCAGTCCCGGACAGGATGCGGGACACATGAGGCTCCAGTCCCCGT 213804
|| |||| ||| || || || || ||| ||||||||| |||| || ||||
Sbjct 325166 CACCGTAGACGTCGTCAAGACCGGGGCACTCGTTGGGGCACATGAGGGTCCACTCGCCGT 325107
Query 213805 CAT-CTCTGACTCTCTGCATGAACAGGTCCGGGACCCACAGCGCGGTGAACAGGTCCCTG 213863
| ||| ||||| || |||||||||||| || | |||||| || ||||||||| | |
Sbjct 325106 TCTGCTC-GACTCGCTCCATGAACAGGTCGGGAATCCACAGGGCCAGGAACAGGTCTCGG 325048
Query 213864 GTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAAAGTCAAAGATGTCCGCG 213923
| | |||| ||| ||| ||| || ||||| || || || |||||||| ||
Sbjct 325047 GCTCGGATCTCCTCCTTTCCGTGGTTCTTTCGCAGCTCGCAGAACTCGAAGATGTCGTCG 324988
Query 213924 TGCCACGGCTCCATGTAGATGGCAAAGGCGCCCGGCCTCTTG---CCGCCCTGGTCCACC 213980
||||| ||||| | ||| ||||||||||| || || | |||| || |||||||| ||
Sbjct 324987 TGCCAAGGCTCAAGGTACATGGCAAAGGCTCCGGGTCGCTTGTTACCACCCTGGTCAACG 324928
Query 213981 AGCCTGGCCACCATGTTGAAGATGCGCAGGACGGGTACCAGCCCGTTGGACTGTCCGTTG 214040
| ||| ||||| ||| || || | ||| || | |||||||| ||||||
Sbjct 324927 TATCGGGCAGTGTTGTTGTAGACTCGGAGCATGGGCACGATACCGTTGGAGGTACCGTTG 324868
Query 214041 GTTCCCGCTATATACGAGCCGGAGGCCCTCAGGTTGCTCATGGAGAGCCCTATGCCACCG 214100
|| || || || || ||||||| ||| | | |||| |||||||| || || || |||
Sbjct 324867 GTGCCGGCAATGTAGGAGCCGGTGGCTCGAATGTTGTGGATGGAGAGACCGATACCTCCG 324808
Query 214101 GCGTACTTGGAGATCATGGCGCAGCGCCTCACAGTCTCCATGATGCCGGCCATGCTGTCA 214160
|| |||||||||| | || ||| | | | || || ||||||| | ||| |||
Sbjct 324807 GCAGACTTGGAGATGAGAGCACAGGTCTTGAGGGTATCGTAGATGCCGTCGATGGAGTCG 324748
Query 214161 TCTGTGAGGTTCAGCAAGAAGCAGCTCGAGAGCTGGGGCCTGGACGAGCCAGAGTTGAAA 214220
|| | | ||| | | ||| || || | ||||||| || | |||| |||| |
Sbjct 324747 TCCTTCATGTTGACGAGGAAACACGAAGACATCTGGGGCTGGGGGGTTCCAGCGTTGTAG 324688
Query 214221 AGCGTGGGGCTGGCATGGATCATAAACTTGTTAGAGAGGAGCCTGTAGGTCTCCAGGACT 214280
|| |||||| || ||| | | |||| | || | | |||||||||| | | |
Sbjct 324687 AGAGTGGGGGAAGCGTGGGTGAAGTACTTCTGGGACATGTAGTTGTAGGTCTCAATGGCC 324628
Query 214281 GAGGGGATGTCGTGCTTGTGGATCTGTAGAGCGCACCTCATCAGCATGTGCTGGGGCCTC 214340
|| |||| || |||||| | || | | ||| | ||| |||||||| | |
Sbjct 324627 CGGGCAATGTTGTCACCGTGGATACCGACAGAGACTCGCATGATCATCTGCTGGGGTCGC 324568
Query 214341 T---CTATGGGTCCTTTGGGGCCCTTG-AGCAGGTAGGAGCGCTCCAGAGTCTTGAACCC 214396
| | | | ||| ||| || | |||||||| | |||||||| |||||||| ||
Sbjct 324567 TCGGCAACAGCTCCGTTG----ACTCGAAGCAGGTATGCTCGCTCCAGGGTCTTGAAGCC 324512
Query 214397 AAAGTAGGAGTAGGT 214411
||||||| ||||||
Sbjct 324511 AAAGTAGTTGTAGGT 324497
>seq6
Length=2655350
Score = 241 bits (266), Expect = 2e-58
Identities = 496/733 (68%), Gaps = 11/733 (2%)
Strand=Plus/Minus
Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898
||||||||| ||||| ||||| |||||||| ||||| || ||| || ||||||||
Sbjct 575198 CTGGTAGTCAGACACTCGCTTCTCGAAGAAGTTGGTCTTTCCAGCCAGAGAAATGTTCTC 575139
Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACACCCGTGTCAGGCCCATCTGTTCCAGCAG 47958
||||||| |||||||||| | ||| || ||| | || | | |||||
Sbjct 575138 CATGAAGTCAAAGGGGTTGGTGGAGTTGTAGACCTTGGGGTTTCCAAGAGCAACAAGCAG 575079
Query 47959 GTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGG- 48017
| || || || |||| ||||| | | |||||| || |||||| || | ||
Sbjct 575078 ACGGTCGGCCACAAACTCAATGTACTGTCGCATGAGCTTGGCGTTCATACCGAGCAGACC 575019
Query 48018 ACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATCT 48077
||| ||| | ||| | || || ||||||| ||| || || || || | | | |
Sbjct 575018 ACAAGGG-AGAGCATCAGTAAGGAACTCCTGCTCAATGCCAACAGCCTCGACAATGACGT 574960
Query 48078 GCTTAACGCGGGACTCTGAGGGTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAGGCAA 48137
|| || || |||||| ||| ||||| | |||||| |||||||
Sbjct 574959 CCTCGACAATCTTCTTGGAGGGTCGGTTCTCGAGGTGAGAGA---AGAGCAGACAGGCAA 574903
Query 48138 AGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGGCA 48197
|||| |||||| || || || || |||||| ||||||||||| || |||||||
Sbjct 574902 AGTCGGTGTGCAGACCCTCATCTCGAGAAATGAGCTCGTTGGAGAAGGTCAGGCCAGGCA 574843
Query 48198 TGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCCCT 48257
||| || | || |||||||||||||| | || ||||| || |||||||| || ||||
Sbjct 574842 TGAGACCTCGCTTCTTGAGCCAGAAAATGGAGGCAAAAGATCCGGAGAAGAAAATACCCT 574783
Query 48258 CCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGATCCAGG 48317
| || || || || ||| | || | ||| || || | || | | ||| ||||||||
Sbjct 574782 CAACGGCAGCAAAGGCGATAAGTCGCTCGCCAAAGGTAGACTCGTCGTCGGAGATCCACT 574723
Query 48318 AAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGGAAGAGCT 48377
|| |||||||| ||||||||||||||||| || || ||||| ||||| ||| || |
Sbjct 574722 TGAGAGCCCAGTCGGCCTTCTTCTTGATGCAGGGAATGGTCTCAATGGCGTTGAACAGGT 574663
Query 48378 TCTTGCACTCACCTGCGTCCGCAACATAGGT---AGTGAGCAGCTTTGCGTACATCTCAG 48434
| | ||| | |||| | || || | ||||||| | ||| |||| |
Sbjct 574662 AAGTTCGCTCCTTGGGGTCCTTGATGTAAGTATCAATGAGCAG---AGAGTAGGTCTCGG 574606
Query 48435 AGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACACCTGCA 48494
| || | ||||| || ||||||||| ||||||||| | |||||||| |||| |
Sbjct 574605 AATGGATGTTCTCCATCATGATCTGGAATCCGTAGAAGCACTTGGCCTCAGGAGCCTGAA 574546
Query 48495 CTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAGCAAAGA 48554
| ||| ||||| | ||| | ||| ||||| ||||| || || || || ||||||||||
Sbjct 574545 CCTCTCCAGAGAACCGCTCAACCAGGTTCTCGTTGACAATACCGTCAGAGGCAGCAAAGA 574486
Query 48555 AGGCAAGGACATG 48567
| || || || ||
Sbjct 574485 AAGCCAGCACGTG 574473
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 931532578760960
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