Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20sp._20JCM_2030694_20[genbank_20GCA_5F001600515.1_202016-
03-01] 19 sequences; 21,758,297 total letters
Query= NC_019495.1
Length=290304
Score E
Sequences producing significant alignments: (Bits) Value
seq2 338 1e-87
seq6 282 8e-71
>seq2
Length=4150472
Score = 338 bits (374), Expect = 1e-87
Identities = 953/1444 (66%), Gaps = 31/1444 (2%)
Strand=Plus/Minus
Query 221427 CGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTGGCCTCGGGAGAAGTGAAGG 221486
|||||||||||||||| |||||| ||||||| ||||||||||| || ||||
Sbjct 325694 CGTGGTAGATGGTCTCGAAGATCTGGATGTTGAGCTTCTTGGCCTCGTCGGACTCAAAGG 325635
Query 221487 GCATACGCAGCATCTGAAAGACGTCGGCCAGTCCCTGTACTCCGATACCGATGGGCCTGT 221546
| | |||||| | ||| || ||||| ||||| || || | | ||||||| | ||
Sbjct 325634 GGAGACGCAGAGCCATGAAGGTATCAGCCAGACCCTGGACACCCAGAGCGATGGGTCGGT 325575
Query 221547 GTCTCCTGTTGGAAGCGGCCGCTTCTGGCACGGGATAAAAGTTGACGTCGATCAGATTGT 221606
||| | ||||||| || || || ||||| || |||| |||||| | ||
Sbjct 325574 GTCGCATGTTGGACTTCTTGGCCTCGGGAACGGGGTAGTAGTTTCGGTCGATGATGGCGT 325515
Query 221607 TGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGTGATTGAACACCAACT 221666
||||||| | ||||| || | | || |||||||| | | | | | | | |
Sbjct 325514 TGAGGTTTCGCACAATGACCTTGGCAATATCATGCAGCTTCTTGAAGTCGTAGAACGAGT 325455
Query 221667 CGCCGCCGTCGTGGAGGGGTTCCACAAAAGCGTTTAGGGCAACGCTGGCCAGGTTACACA 221726
| |||| | ||| ||| |||| | || |||| | ||||||||| || |
Sbjct 325454 TGGTCTCGTC-TCGAGT-----CACGAAAGTGGGCAGAGCAATGGAGGCCAGGTTGCAGA 325401
Query 221727 CGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACAGAGGTTGCTGCACTTGA 221786
|||| ||||| || | |||| | ||||| ||| |||||| ||||||
Sbjct 325400 CGGCAACCTCATCGGGAGAAGAGTACTCGACAATCTCGCAACACAGGTTGGAAGACTTGA 325341
Query 221787 TGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGTCCTTGTAGAGCATAAAGG 221846
|||| ||||||| || || || ||||| || ||| | ||||||||||||||| ||||
Sbjct 325340 TGGTTCCCAGGTTCTTCTGGTTGGACTTTCGGTTGCAGGAGTCCTTGTAGAGCATGAAGG 325281
Query 221847 GACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAGAGTTCTCTGG-CGCTCACC 221905
| || | ||| ||| | ||||| | || ||| || | ||||| || |
Sbjct 325280 GGTTTCCGGACTCGGTCTGGCAGTCGAGAATGTGGTACCACAGCT-TCTGGGCGGGGATG 325222
Query 221906 GTCCTCTTGACTGCACCCTCGGTCTTTTCATACCCGGTATAGAGCATGTCAAACTTTTCA 221965
|| | | || ||||| || | | | || || ||| | | |||| |||
Sbjct 325221 GTTCGTCGGCCTCGTCCCTCTCGCTCGTACTGCTCG---TACAGCTTCTTGAACTCGTCA 325165
Query 221966 CCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGACACATCAGACTCCAGTGCTTGTTG 222025
||||| | ||||| || || || ||| | ||| ||||| || |||| | |||
Sbjct 325164 CCGTAGACGTCGTCAAGACCGGGGCACTCGTTGGGGCACATGAGGGTCCACTCGCCGTTC 325105
Query 222026 TCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGCCTGAAAGAGATCTCTGGTC 222085
| | ||| | || |||||| ||||| || |||||||| ||| | || || |||| ||
Sbjct 325104 TGCTCGACTCGCTCCATGAACAGGTCGGGAATCCACAGGGCCAGGAACAGGTCTCGGGCT 325045
Query 222086 CGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAACTCAAAAATGTCAGCGTGC 222145
|| ||||||| |||| ||| || | ||| || | ||||| || ||||| |||||
Sbjct 325044 CGGATCTCCTCCTTTCCGTGGTTCTTTCGCAGCTCGCAGAACTCGAAGATGTCGTCGTGC 324985
Query 222146 CACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTGTTGCCACCCTGATCCAC-CAT 222204
|| ||||| || || | ||| | || |||||||||||||| |||||||| || || ||
Sbjct 324984 CAAGGCTCAAGGTACATGGCAAAGGCTCCGGGTCGCTTGTTACCACCCTGGTCAACGTAT 324925
Query 222205 CCTCTCCAGAG-CGTTGAAGATGCGAAGGGTCGGTACCAGTCCGTTGGATCGACCGTTGG 222263
| ||| | |||| ||| || || | || || | |||||||| ||||||||
Sbjct 324924 C--GGGCAGTGTTGTTGTAGACTCGGAGCATGGGCACGATACCGTTGGAGGTACCGTTGG 324867
Query 222264 TGCCCTTAATGTACGCACCGCCGGCCCTCAGGTTACTGGCAGACATGCCGATACCACCGG 222323
|||| |||||| | ||| ||| | | ||| | || | |||||||| ||||
Sbjct 324866 TGCCGGCAATGTAGGAGCCGGTGGCTCGAATGTTGTGGATGGAGAGACCGATACCTCCGG 324807
Query 222324 CGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTCCATGATGCCCTCCATAGAGTCCT 222383
| || ||||| | || ||| ||||||| || || |||||| || || ||||| |
Sbjct 324806 CAGACTTGGAGATGAGAGCACAGGTCTTGAGGGTATCGTAGATGCCGTCGATGGAGTCGT 324747
Query 222384 CCTTGACGTTCAGCAGAAAACAAGACGACATCTGAGATTTGGTGGAACAGGCGTTAAACA 222443
|||| | ||| | || ||||| || |||||||| | | || || | ||||| | |
Sbjct 324746 CCTTCATGTTGACGAGGAAACACGAAGACATCTGGGGCTGGGGGGTTCCAGCGTTGTAGA 324687
Query 222444 GCGTGGGACTGGCGTGTGTAAAGTAGCCCCTAGACATCAGATCGTACGTCTCTACGACTC 222503
| ||||| ||||| || ||||| | ||||| | ||| ||||| | | | |
Sbjct 324686 GAGTGGGGGAAGCGTGGGTGAAGTACTTCTGGGACATGTAGTTGTAGGTCTCAATGGCCC 324627
Query 222504 TGGCGATGTTGTCCCCGTGAATCTGCATGGCGCATCTCATGTACATGTACTGGGGCCTCT 222563
||| |||||||| ||||| || | | | || |||| ||| | |||||| | ||
Sbjct 324626 GGGCAATGTTGTCACCGTGGATACCGACAGAGACTCGCATGATCATCTGCTGGGGTCGCT 324567
Query 222564 ---CCACAGGACCCTTGGAGCTGGAGAGCAGGTACGATTTTTCCAGAGTCTTGAACCCAA 222620
| |||| || ||| || || |||||||| | | ||||| |||||||| ||||
Sbjct 324566 CGGCAACAGCTCCGTTG--ACTCGA-AGCAGGTATGCTCGCTCCAGGGTCTTGAAGCCAA 324510
Query 222621 AGTAGTTG-AGGTCAAAGTCTCTGCCGTGAACCACGGCGGCGTCCAGCTC--CGAC-TTG 222676
|||||||| |||| ||||||| | ||| | ||||| ||| ||||| || | |||
Sbjct 324509 AGTAGTTGTAGGT-GAAGTCTCGGTCGTAGAGAACGGCACCGTTGAGCTCGTCGGCGTTG 324451
Query 222677 TGCTTTACGCTCAACTCGAAAAAGCGCTCAGACACGAGGGGAGCGTTCTCTTTGGTGTCG 222736
|| ||| | ||| | | | || ||||| | ||| | || || ||| | |
Sbjct 324450 GCCTGGACGGT---GTCGTAGAGGTCCTTGGACACCATGGGGGAGTGCTTCTTGTTTCGG 324394
Query 222737 GGGTTAACGTTGTGGTACAGCTGCCACATGGCATCAGAGAAC-GTGTCGGGAGTCTGCTT 222795
||||| |||| ||||||||| | | | | | |||||| | || | ||||||||
Sbjct 324393 GGGTTGACGTAGTGGTACAGGTCGTAGACAACCTGGGAGAACTGCTTCTTG-GTCTGCTT 324335
Query 222796 GTGCAGATTCGACACGGCGATCCGAGACGCCAAGATACCATAGTCAGGGTGCACGGTGGT 222855
|||||| || || || ||||| |||| |||| || | ||||| || |||| |||||
Sbjct 324334 GTGCAGGTTGGAAACAGCGATTCGAGCAGCCAGAATGGCGTAGTCGGGATGCAGAGTGGT 324275
Query 222856 CATG 222859
||||
Sbjct 324274 CATG 324271
>seq6
Length=2655350
Score = 282 bits (312), Expect = 8e-71
Identities = 571/843 (68%), Gaps = 24/843 (3%)
Strand=Plus/Plus
Query 25474 GATATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGAT 25533
|| || ||| |||||||||||||||| | || |||||||||||| |||||||||
Sbjct 574350 GAGATTTGGCAGATGTACAAGAAGGCCGAGGCTTCTTTCTGGACCGCCGAGGAGATTGAT 574409
Query 25534 CTGGCCAAGGACATGGACGGCTGGTAC-----GCTCTATCCAAAGACGAGCAGCATTTTC 25588
|| | |||||| |||| || |||| | |||| | || |||||| || |||
Sbjct 574410 CTCGGCAAGGATATGGGCGACTGGGAGAACCGGCTCAA--CAGCGACGAGAAGTTTTTCA 574467
Query 25589 TCAAGTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCG 25648
| | ||||| |||| |||||||| |||||||| ||||| || |||||||| ||| |
Sbjct 574468 TTTCGCACGTGCTGGCTTTCTTTGCTGCCTCTGACGGTATTGTCAACGAGAACCTGGTTG 574527
Query 25649 AGAGATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGG 25708
|| | ||| | | || || ||| ||||||||||| |||||||| ||||||||
Sbjct 574528 AGCGGTTCTCTGGAGAGGTTCAGGCTCCTGAGGCCAAGTGCTTCTACGGATTCCAGATCA 574587
Query 25709 CCATCGAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCT-GATGACGTACATTACAGAC 25767
|| || || | || || ||| || | ||| | ||| || ||||| | |||
Sbjct 574588 TGATGGAGAACATCCATTCCGAGACCTACTCTCTGCTCATTGAT-ACTTACATCAAGGAC 574646
Query 25768 GTCGCCGAGAGAGATCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAAG 25827
| ||| || | ||||| ||||| ||| ||| ||| ||||||||| ||||
Sbjct 574647 CCCAAGGAGCGAACTTACCTGTTCAACGCCATTGAGACCATTCCCTGCATCAAGAAGAAG 574706
Query 25828 GCGCGGTGGGCCATGAAGTGGATCAACAGCCA-GAGCGCTACGTTTGGCGAGCGGCTGGT 25886
|| ||||| | ||||||||| | | | ||| |||| ||||||||||| || |
Sbjct 574707 GCCGACTGGGCTCTCAAGTGGATCTCCGACGACGAGT-CTACCTTTGGCGAGCGACTTAT 574765
Query 25887 AGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCT 25946
||||||||||| || ||||| || || ||| ||| || ||||| |||| ||||||||
Sbjct 574766 CGCCTTTGCTGCCGTTGAGGGTATTTTCTTCTCCGGATCTTTTGCCTCCATTTTCTGGCT 574825
Query 25947 CAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACGA 26006
|||| || || |||||| || ||| ||| |||||||||||||| | || ||
Sbjct 574826 CAAGAAGCGAGGTCTCATGCCTGGCCTGACCTTCTCCAACGAGCTCATTTCTCGAGATGA 574885
Query 26007 GGGTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTCCACAA---ACC 26063
|||||| |||| || |||||||| ||||||| | | ||| ||| | || |||
Sbjct 574886 GGGTCTGCACACCGACTTTGCCTGTCTGCTCTTCTC---TCAC---CTCGAGAACCGACC 574939
Query 26064 TTCTCAAG-AGACCGTCTACAGTATCATCAAAGAGGCTGTGGAGATCGAGAAGGAGTTTC 26122
|| |||| ||| ||| | |||| |||||||| | || ||| ||||||| |
Sbjct 574940 CTC-CAAGAAGATTGTCGAGGACGTCATTGTCGAGGCTGTTGGCATTGAGCAGGAGTTCC 574998
Query 26123 NNNNNNNNNNNNNNNNNNNNNNNNNNNTGGGCATGAACAACAGACTCATGAGCCAATACA 26182
| || |||||| || |||||| | || ||||
Sbjct 574999 TTACTGATGCTCTCCCTTGTGGTCTGCTCGGTATGAACGCCAAGCTCATGCGACAGTACA 575058
Query 26183 TTGAGTATGTGGCCGACCATCTGC-TGTGCCAGCTGGGACTCGCCAGACTCTACAGTACG 26241
|||||| ||||||||||| ||||| ||| | || ||| | ||| |||||| |
Sbjct 575059 TTGAGTTTGTGGCCGACCGTCTGCTTGTTGC-TCTTGGAAACCCCAAGGTCTACAACTCC 575117
Query 26242 CCTAACCCGTTCGACTTTATGGAAAACATATCGTTGGAAGGGAAGACCAACTTCTTTGAA 26301
| ||||| || ||||| ||||| ||||| || ||| || |||||||||||||| ||
Sbjct 575118 ACCAACCCCTTTGACTTCATGGAGAACATTTCTCTGGCTGGAAAGACCAACTTCTTCGAG 575177
Query 26302 AAG 26304
|||
Sbjct 575178 AAG 575180
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 928844579399360
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