Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20sp._20JCM_2030694_20[genbank_20GCA_5F001600515.1_202016-
03-01] 19 sequences; 21,758,297 total letters
Query= NC_020852.1
Length=186468
Score E
Sequences producing significant alignments: (Bits) Value
seq6 165 1e-35
seq5 89.7 6e-13
>seq6
Length=2655350
Score = 165 bits (182), Expect = 1e-35
Identities = 302/440 (69%), Gaps = 2/440 (0%)
Strand=Plus/Plus
Query 65069 CCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCAT 65128
|||| | |||||| ||| | || ||||| || |||||||| ||||||||||| || |
Sbjct 574747 CCTTTGGCGAGCGACTTATCGCCTTTGCTGCCGTTGAGGGTATTTTCTTCTCCGGATCTT 574806
Query 65129 TCTGCGCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATG 65188
| | | |||| ||| | |||||||| ||||||||||| ||||| |||||| || |
Sbjct 574807 TTGCCTCCATTTTCTGGCTCAAGAAGCGAGGTCTCATGCCTGGCCTGACCTTCTCCAACG 574866
Query 65189 AACTTATTTCCCGAGATGAGGGTCTCCACCAGGAGTTTGCCGTGGAGCTCTTC-AAGACT 65247
| || ||||| |||||||||||||| ||| || |||||| ||||||| ||
Sbjct 574867 AGCTCATTTCTCGAGATGAGGGTCTGCACACCGACTTTGCCTGTCTGCTCTTCTCTCACC 574926
Query 65248 TTGCGTAATAGACCCACTACCGAAACTATCCACGCCATCGTGAAAGAGGCGGTTGAGATT 65307
| | | || ||||| | | | | | || | | | || | ||||| |||| |||
Sbjct 574927 TCGAG-AACCGACCCTCCAAGAAGATTGTCGAGGACGTCATTGTCGAGGCTGTTGGCATT 574985
Query 65308 GAGAAAGGGTTCATCTTGGACGCACTCCCATGTAATCTCATCGGTATGAACTCTGAGAAG 65367
||| | | |||| | || || ||||| ||| ||| ||||||||||| | ||
Sbjct 574986 GAGCAGGAGTTCCTTACTGATGCTCTCCCTTGTGGTCTGCTCGGTATGAACGCCAAGCTC 575045
Query 65368 ATGTCCGAGTACATTGAGTATGTGTCGGATCGTCTCCTCAAACAAGTTGGGGTGCCACCC 65427
||| |||||||||||| |||| | || ||||| || |||| ||
Sbjct 575046 ATGCGACAGTACATTGAGTTTGTGGCCGACCGTCTGCTTGTTGCTCTTGGAAACCCCAAG 575105
Query 65428 ATTTGGAACGCGAAGAATCCATTTGACTTTATGGAAAACATTAGCCTTGATGGGAAGACC 65487
| | ||| | | || || |||||||| ||||| |||||| || | ||| ||||||
Sbjct 575106 GTCTACAACTCCACCAACCCCTTTGACTTCATGGAGAACATTTCTCTGGCTGGAAAGACC 575165
Query 65488 AACTTCTTTGAGAAGCGAGT 65507
|||||||| |||||||||||
Sbjct 575166 AACTTCTTCGAGAAGCGAGT 575185
>seq5
Length=2743614
Score = 89.7 bits (98), Expect = 6e-13
Identities = 282/425 (66%), Gaps = 18/425 (4%)
Strand=Plus/Plus
Query 76511 GCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCA 76570
|| || ||||| ||||| ||||| | ||||| | ||| |||| || || |||||||||
Sbjct 1440382 GCTCCTATGCCTACAGCTTCCACTTCTCAAATTCTAGGTCATAACGAGTGTTTTGAACCA 1440441
Query 76571 TACACAACAAACATCTACCTGAGAAGAACCCTCGCAGGTGAGTTTGTCATTGTCAACAAG 76630
||||| | ||||||||||| ||||| || |||||||| ||| | | |||||| |
Sbjct 1440442 TACACCTCCAACATCTACCTCCGAAGAGTCCAAGCAGGTGAATTTCTAGTCGTCAACCAA 1440501
Query 76631 CACCTCGTCAATGACCTCAAGAAGATTGGTCTCTGGTCCAAGGATATGAAGGATC---TC 76687
||| | || || |||| || | || | ||| | || ||||| | | ||
Sbjct 1440502 TGGCTCATGAAAGATCTCATCAAACTGGGCATGTGGAATGAAGAGATGAAAAACCGAATC 1440561
Query 76688 AT-GGTGAAAGCGGGTGGTTCCATTCAAAATATCTCAGATATCCCAGATGATATCAAGAA 76746
|| || | ||| | | || || || ||||| |||||||| | ||| |||
Sbjct 1440562 ATCCACGATAACGGCTCTGTTCAGTC--GATTACTCAG--ATCCCAGAAAAGATC-AGAG 1440616
Query 76747 TC-TCTACCGCACAGTGTGGGAAATCAAGATGAAAGA-TGTCATTGACATGGCCGCAGAT 76804
| | ||||| |||| ||||| ||||| | | || | ||||||| ||||| ||||
Sbjct 1440617 CCGTGTACCGAACAGCCTGGGAGATCAA-AGCCAGGAGTATCATTGATATGGCAGCAGCA 1440675
Query 76805 CGTGGTCGCTTCATTGATCAAAGTCAAAGTATGAATCTATTCAT---GGAAAGTCCAACG 76861
|| | || | |||||| ||| || || ||||| | ||||| ||||| | |
Sbjct 1440676 CGAGCTCCGTACATTGACCAATCACAGAGCTTGAATATTTTCATGCCGGAAATT--ACTC 1440733
Query 76862 ATGTCCAAGCTCTCTTCTATGCATATGTACGCGTGGAAACAGGGGCTCAAAACCGGAATG 76921
||| || || | | |||||| | ||| ||||| ||| |||||||| || |||
Sbjct 1440734 ATG-GAAAAATCACAGCCATGCATTTCCACGGCTGGAAGACGGGTCTCAAAACAGGCATG 1440792
Query 76922 TACTA 76926
|| ||
Sbjct 1440793 TATTA 1440797
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 596569458314720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |