Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20sp._20JCM_2030694_20[genbank_20GCA_5F001600515.1_202016-
03-01] 19 sequences; 21,758,297 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq5 131 5e-25
seq2 127 6e-24
seq6 116 1e-20
seq4 93.3 1e-13
>seq5
Length=2743614
Score = 131 bits (144), Expect = 5e-25
Identities = 376/570 (66%), Gaps = 14/570 (2%)
Strand=Plus/Minus
Query 251425 CACACATGGACGCTGTAAGCATCAGATGCGTCATATAGCCGACCCTTGGTGAAGCGAGAT 251484
|| ||||| | | | |||||||||| || || || || ||||| ||| ||
Sbjct 360682 CAAACATGAATTCGGAAAGCATCAGACGCCTCCATCAGACGCTCCTTGAGGAAAGCAGCG 360623
Query 251485 GCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGACCACCATCGCGA 251544
||||| || | |||||||||||||||||||||||| |||||||| |||||||| || |
Sbjct 360622 GCACCATGGGCAATCATACAATCACGCTCCATTTCTCCGAAACGCAGACCACCTTCTCTC 360563
Query 251545 GCCCTACCCTCGGCAGGCTGACGAGTGAGATTAACCATAGGACCGATGGAG--CGGCTAT 251602
| | ||| || ||||||| ||||||||| | || ||| || | ||| ||| |
Sbjct 360562 GATCGACCTTCAACAGGCTGTCGAGTGAGAATCTGCACAGGTCC--TCGAGCTCGGGCGT 360505
Query 251603 GTTGCTTATCATTTACCATATGCTTGAGACGCTGGTAGAATGCGGGACCGATGAAGATGC 251662
| ||| || | |||||||| | |||||||||||| | | ||||| | ||| | |
Sbjct 360504 GGATCTTGTCGTCCACCATATGTCTCAGACGCTGGTAGTAAGTAGGACCCAGGAA-ACAC 360446
Query 251663 TCGAAGGC---ATTTGCTCTCCAGTTAGAGCGTTATACATAACTTCGTTTCCATTAGATT 251719
| | | | || | || |||||| || | | ||||| || || || ||| |
Sbjct 360445 TGG--GCCATAATCTTCTTTCCAGTGTGACCATGGTACATGACCTCAAAGCCTCGAGACT 360388
Query 251720 CATAACCAAGTTTCTGTAGCTCTGAAGCAATATCACCAATCTTGAATTTGCTAAAACTGG 251779
|| ||| | | | || | || ||| || ||| | | | | ||| |
Sbjct 360387 GGTATCCATGAGACCGCAGGAGTTTAGAAATGGCATCAACAGTCACATCAGTGAAAGGCG 360328
Query 251780 TGCCGTCTCCGTAAAGACCCATTTGAATCAACACTTTGCCTAAAAGTGTCTCTTTCAGTT 251839
|| | ||||| | |||||| | | |||| ||| || || ||| ||| |
Sbjct 360327 TGGCATCTCCCTCCAGACCCGACAAACACGACACCTTGGACAACAGACACTCAATCAAAT 360268
Query 251840 GGGCGATAGTCATACGACTGGGAATAGCATGGGGATTGATGATGATGTCGGGTTTCAGTC 251899
|||| | |||||||| ||||| || ||||| ||||||||||| ||||| || ||
Sbjct 360267 GGGCAACGGTCATACGCGAAGGAATGGCGTGGGGGTTGATGATGATATCGGGCACCACTC 360208
Query 251900 CATCAGCAGTGAAGGGCATATCCTTTTCCTCAATAATGT--TTCCAATAGTTCCCTTTTG 251957
| || || | || ||||| |||| | || | || || ||||| |||||||| ||
Sbjct 360207 CCTCGGCCGAAAACGGCATGTCCTCGT-GTCTA-AACGTAACACCAATGGTTCCCTTCTG 360150
Query 251958 TCCGTGACGAGAACTGAACTTATCACCAAT 251987
|||||||||||| ||||| || |||||
Sbjct 360149 TCCGTGACGAGATGCAAACTTGTCTCCAAT 360120
>seq2
Length=4150472
Score = 127 bits (140), Expect = 6e-24
Identities = 559/876 (64%), Gaps = 9/876 (1%)
Strand=Plus/Minus
Query 155630 GTATTCTACAATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTT 155689
||| || |||||||| || |||||||| ||| ||||||||| || | |||||||||||
Sbjct 325378 GTACTCGACAATCTCGCAACACAGGTTGGAAGACTTGATGGTTCCCAGGTTCTTCTGGTT 325319
Query 155690 AGATTTACTGTTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGC 155749
|| || | ||| || | |||||||| || ||| | ||| |||| | ||| ||||
Sbjct 325318 GGACTTTCGGTTGCAGGAGTCCTTGTAGAGCATGAAGGGGTTTCCGGACTCGGTCTGGCA 325259
Query 155750 GTCCAGAATCTTTAGCCAGAGGTCACGGGCATTAATTTGCTTGTTGTA-TCTGCCTTCCG 155808
||| ||||| | ||| || | |||| || | | || | || || ||
Sbjct 325258 GTCGAGAATGTGGTACCACAGCTTCTGGGCGGGGATG-GTTCGTCGGCCTCGTCCCTCTC 325200
Query 155809 ACTCATATTTCATATACAGCGTTCGGTAATCCTCACCGTAACAATCACTCAGTCCAGGGC 155868
||| || | | |||||| | | | || |||||||| || || || ||||
Sbjct 325199 GCTCGTACTGCTCGTACAGCTTCTTGAACTCGTCACCGTAGACGTCGTCAAGACCGGGGC 325140
Query 155869 ACTTATCGGGGCAAAACAGCGACCAAATTTTATTACCGATT-ACACGCTCCATAAATACA 155927
||| | |||||| | || | ||| || | | | || |||||||| || |
Sbjct 325139 ACTCGTTGGGGCACATGAGGGTCCACTCGCCGTT-CTGCTCGACTCGCTCCATGAACAGG 325081
Query 155928 TCACTCGCCCAAATAGCATAGAAAAGGTCCCTTGCCTTTGA-CTCCTCATCGCCGTGATT 155986
|| ||| | || ||| ||||| | || | || |||||| | ||||| ||
Sbjct 325080 TCGGGAATCCACAGGGCCAGGAACAGGTCTCGGGC-TCGGATCTCCTCCTTTCCGTGGTT 325022
Query 155987 CTTCCGTAGCTCTAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAAA 156046
||| || ||||| |||| || || || || ||||| || ||||| |||||
Sbjct 325021 CTTTCGCAGCTCGCAGAACTCGAAGATGTCGTCGTGCCAAGGCTCAAGGTACATGGCAAA 324962
Query 156047 ACTACCATTCCTCTTG---CCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACC 156103
|| | |||| |||||||| || || || || ||||| || ||| |||| |
Sbjct 324961 GGCTCCGGGTCGCTTGTTACCACCCTGGTCAACGTATCGGGCAGTGTTGTTGTAGACTCG 324902
Query 156104 TAGCATAGGAATAATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATGA 156163
||||| || | ||||| ||||| || || ||||| ||| ||| | || || | |
Sbjct 324901 GAGCATGGGCACGATACCGTTGGAGGTACCGTTGGTGCCGGCAATGTAGGAGCCGGTGGC 324842
Query 156164 GCGAACATTATGAATATGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATTC 156223
|||| || || || || || ||||| || | | || || || |||| ||
Sbjct 324841 TCGAATGTTGTGGATGGAGAGACCGATACCTCCGGCAGACTTGGAGATGAGAGCACAGGT 324782
Query 156224 CTTTACAGTATTGAAAATACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCACGA 156283
||| | |||| | | || || || || || || || | ||| | || | |||||
Sbjct 324781 CTTGAGGGTATCGTAGATGCCGTCGATGGAGTCGTCCTTCATGTTGACGAGGAAACACGA 324722
Query 156284 ACTTAATTGAGGTCGTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAAATA 156343
| | || || | || |||||||||||| | || || || | || || | || ||
Sbjct 324721 AGACATCTGGGGCTGGGGGGTTCCAGCGTTGTAGAGAGTGGGGGAAGCGTGGGTGAAGTA 324662
Query 156344 CTTATTAGACATATAATCGTATGTCTCCTTAATCTTCTCAAGATTAGACCCGTGAATACA 156403
||| | ||||| || | ||| ||||| | | ||| || ||||| ||||
Sbjct 324661 CTTCTGGGACATGTAGTTGTAGGTCTCAATGGCCCGGGCAATGTTGTCACCGTGGATACC 324602
Query 156404 GATAGAGACCCTCATCCACATATGCTGAGGACGCTCTACAATCACTCCATCAATTCGCAG 156463
|| |||||| | ||| ||| ||||| || ||||| ||| |||| | | ||| ||
Sbjct 324601 GACAGAGACTCGCATGATCATCTGCTGGGGTCGCTCGGCAACAGCTCCGTTGACTCGAAG 324542
Query 156464 AAGGTATGCGCGTTCCAGAGTTTTAAACCCGAAATA 156499
|||||||| || ||||| || || || || || ||
Sbjct 324541 CAGGTATGCTCGCTCCAGGGTCTTGAAGCCAAAGTA 324506
>seq6
Length=2655350
Score = 116 bits (128), Expect = 1e-20
Identities = 410/628 (65%), Gaps = 18/628 (3%)
Strand=Plus/Plus
Query 133318 CTTTTATGGGCTACAGATTGCGATGGAAAATATCCATTCTATCACATATTCTACTCTAAT 133377
||| || || | ||||| |||||| || |||||||| || || ||| || ||
Sbjct 574568 CTTCTACGGATTCCAGATCATGATGGAGAACATCCATTCCGAGACCTACTCTCTGCTCAT 574627
Query 133378 TGATACTTACATCAAAGATACCGTCCAGAAGC--AC-AAACTATTCAACGCCATTAGCGA 133434
||||||||||||||| || | | || ||| || | || |||||||||||| | ||
Sbjct 574628 TGATACTTACATCAAGGA---CCCCAAGGAGCGAACTTACCTGTTCAACGCCATT-GAGA 574683
Query 133435 -ATTTCCTTGTATTAAAAAGAAATCTGACTGGGCTATTAAATGGATCCAGGAC-AAGCGT 133492
|||| || || || ||||| | ||||||||| | || |||||| ||| | | ||
Sbjct 574684 CCATTCCCTGCATCAAGAAGAAGGCCGACTGGGCTCTCAAGTGGATCTCCGACGACGAGT 574743
Query 133493 GCGAGTTTTGCTACTCGTCTCGTTGCTTTTGCTGTAGTAGAGGGCAtttttttCAGTGGT 133552
| | |||| || || | || ||||||| || ||||| ||||| ||| ||
Sbjct 574744 -CTACCTTTGGCGAGCGACTTATCGCCTTTGCTGCCGTTGAGGGTATTTTCTTCTCCGGA 574802
Query 133553 GCGTTCTGCTCTATTTTTTGGCTTAAAAAGCGTGGTATTCTACCTGGACTGTGTTTTTCT 133612
| || ||| ||||| ||||| || ||||| ||| | | ||||| ||| || ||
Sbjct 574803 TCTTTTGCCTCCATTTTCTGGCTCAAGAAGCGAGGTCTCATGCCTGGCCTGACCTTCTCC 574862
Query 133613 AACGAACTTATTTCAAGGGACGAGGCACTTCACACCGAATTTGCCGTTTTACTTCACTCT 133672
||||| || ||||| | || |||| || |||||||| |||||| | | || ||||
Sbjct 574863 AACGAGCTCATTTCTCGAGATGAGGGTCTGCACACCGACTTTGCCTGTCTGCTCTTCTCT 574922
Query 133673 AAATTAGAG---CGACCACTCAAAAAGAATAAGATTGAAGAAATTATTAGAGAAGCGGTT 133729
| | ||| ||||| ||| ||||| | | || || | ||| || || |||
Sbjct 574923 CACCTCGAGAACCGACC-CTC--CAAGAAGATTGTCGAGGACGTCATTGTCGAGGCTGTT 574979
Query 133730 GAAATTGAGGTTGAATTTATCAATAGTGCTCTGCCGTGCCGTTTAATTGGTATGAATGAT 133789
| |||||| || || | | | |||||| || || || | | |||||||| |
Sbjct 574980 GGCATTGAGCAGGAGTTCCTTACTGATGCTCTCCCTTGTGGTCTGCTCGGTATGAACGCC 575039
Query 133790 GTGCTGATGCAGCGTTATATTGAATTTGTAGCTGACAGATTGGCCGTTCAGTTAGGTGGG 133849
||| |||| | || ||||| ||||| || ||| | || ||| | ||
Sbjct 575040 AAGCTCATGCGACAGTACATTGAGTTTGTGGCCGACCGTCTGCTTGTTGCTCTTGGAAAC 575099
Query 133850 GATAAGATTTACGGTTCCGCCAATCCATTCGACTGGATGGAGAGCATTAGCATTGAATCA 133909
||| | ||| ||| |||| || || |||| ||||||| |||| | | |
Sbjct 575100 CCCAAGGTCTACAACTCCACCAACCCCTTTGACTTCATGGAGAACATTTCTCTGGCTGGA 575159
Query 133910 AAGACTAATTTCTTCGAG--GCGAGGGT 133935
||||| || ||||||||| ||||| ||
Sbjct 575160 AAGACCAACTTCTTCGAGAAGCGAGTGT 575187
Score = 93.3 bits (102), Expect = 1e-13
Identities = 91/117 (78%), Gaps = 3/117 (3%)
Strand=Plus/Minus
Query 301815 AATTTCTTCAATACGGGGAACACCACGGGTTACGTTAGACTTGGACGCAACACCAGCAAA 301874
|||||| | |||||||| |||||| |||| ||||| | |||| |||||||| || ||
Sbjct 1861238 AATTTCCTTGATACGGGGTACACCAAGGGTAACGTT---CATGGAAGCAACACCGGCGAA 1861182
Query 301875 GTGGAAAGTATTCAGAGTTAATTGAGTAGTTGGCTCACCAATACTTTGTGCCGCAAT 301931
|||||||| ||||| || | |||||| |||||||||||||| || || ||||
Sbjct 1861181 ATGGAAAGTCTTCAGGGTCATCTGAGTACCGGGCTCACCAATACTCTGGGCACCAAT 1861125
>seq4
Length=2864709
Score = 93.3 bits (102), Expect = 1e-13
Identities = 129/179 (72%), Gaps = 4/179 (2%)
Strand=Plus/Minus
Query 251485 GCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGACCACCATCGCGA 251544
|| |||| | ||| | |||||| ||||||||||| |||| ||| ||||||||||| |||
Sbjct 1112941 GCTCCGTAAGCAATAACACAATCTCGCTCCATTTCTCCGAGACGCAGACCACCATCTCGA 1112882
Query 251545 GCCCTACCCTCGGCAGGCTGACGAGTGAGATTAACCATAGGACCGATGGAG--CGGCTAT 251602
| | |||||||| |||||| ||||||||| | |||||| | ||| || ||
Sbjct 1112881 GATCGACCCTCGGTAGGCTGTCGAGTGAGAACTGCTCGAGGACC--TCGAGGTCGAGCAT 1112824
Query 251603 GTTGCTTATCATTTACCATATGCTTGAGACGCTGGTAGAATGCGGGACCGATGAAGATG 251661
| ||| || | ||||||||||| || ||||||| | ||| || | ||| |||
Sbjct 1112823 GCATCTTGTCCATGACCATATGCTTCAGCTTCTGGTAGTAGATGGGGCCAAAGAAAATG 1112765
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1471817241704403
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