Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20sp._20JCM_2030694_20[genbank_20GCA_5F001600515.1_202016-
03-01] 19 sequences; 21,758,297 total letters
Query= NC_021858.1
Length=1908524
Score E
Sequences producing significant alignments: (Bits) Value
seq2 203 4e-46
seq3 136 5e-26
seq6 134 2e-25
seq1 118 1e-20
>seq2
Length=4150472
Score = 203 bits (224), Expect = 4e-46
Identities = 225/300 (75%), Gaps = 0/300 (0%)
Strand=Plus/Minus
Query 1630065 CTGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGA 1630124
|||||| ||||| || || |||| ||| |||| |||||||||||||||| ||||||||
Sbjct 324937 CTGGTCAACGTATCGGGCAGTGTTGTTGTAGACTCGGAGCATGGGCACGATACCGTTGGA 324878
Query 1630125 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAAGCC 1630184
||||||||||| || | ||||| ||||| ||| || | ||||| || | ||
Sbjct 324877 GGTACCGTTGGTGCCGGCAATGTAGGAGCCGGTGGCTCGAATGTTGTGGATGGAGAGACC 324818
Query 1630185 GATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCCCTC 1630244
||| || ||||| |||||||||||||| || || ||||| || ||||||||||| ||
Sbjct 324817 GATACCTCCGGCAGACTTGGAGATGAGAGCACAGGTCTTGAGGGTATCGTAGATGCCGTC 324758
Query 1630245 GATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGTGCC 1630304
||| |||||| ||||||||| ||||| || ||||| || | || || || | || ||
Sbjct 324757 GATGGAGTCGTCCTTCATGTTGACGAGGAAACACGAAGACATCTGGGGCTGGGGGGTTCC 324698
Query 1630305 GGCGTTGAAGAGCGTGGGCGTCGCCGCGGTGAACAACTGCCGCGACATGGCGTCGTAGGT 1630364
|||||| |||| ||||| | || |||||| ||| | | |||||| || ||||||
Sbjct 324697 AGCGTTGTAGAGAGTGGGGGAAGCGTGGGTGAAGTACTTCTGGGACATGTAGTTGTAGGT 324638
>seq3
Length=2956712
Score = 136 bits (150), Expect = 5e-26
Identities = 284/423 (67%), Gaps = 0/423 (0%)
Strand=Plus/Minus
Query 18060 CATGAGCACATTCGGCAAGGTATTTAGGGTCACCACCTTTGGCGAGTCGCACGGGGCGGG 18119
||||||||| ||||||| | || | |||||||||| ||||| |||||| | |
Sbjct 1415225 CATGAGCACTTTCGGCACTCTCTTCAAAGTCACCACCTACGGCGAATCGCACTGCAAGTC 1415166
Query 18120 CGTCGGCTGCATCATCGACGGCGTGCCGCCGTGCATGCCACTGGCCGAGGCCGACATCCA 18179
||| || ||||| |||||||||| || || | ||| || | |||| | || || ||
Sbjct 1415165 CGTGGGATGCATTGTCGACGGCGTTCCTCCCGGTATGGAGCTTGACGAGTCTGATATTCA 1415106
Query 18180 GCCTCAGTTGGATCGGCGCCGACCGGGCCAGGGCGCACTTTCCACGCCGCGCAACGAGCC 18239
|||||| || ||| || |||| || || || ||| |||| || || |||||||
Sbjct 1415105 GCCTCAACTGACTCGACGAAGACCCGGTCAATCTGCTCTTACCACTCCTCGAAACGAGCG 1415046
Query 18240 CGATCGCGTCATCATCCAGTCGGGCACGGAGAACGGCCTCACGCTCGGCTCGCCCGTCGG 18299
||| ||| || ||||| || ||| | ||| || || ||| | ||| | |
Sbjct 1415045 AGATGCCGTTGCTATTCAGTCTGGATGTGAGTATGGCAAGACTCTGGGCACTCCCATTGC 1414986
Query 18300 CCTCTTTGTGGCCAACCGCGACCAGCGGCCCGTCGACTATTCCGACATGTGCAAGGTGCC 18359
| | | ||| ||| |||||||| || || || || || ||| | | ||
Sbjct 1414985 CATGCTGGTGCAAAACAAGGACCAGCGACCTCATGATTACTCTGAGATGGACGATTACCC 1414926
Query 18360 GCGGCCCTCACACGCCGACTACACCTACATGGCCAAGTACGGCATCAAGGCGTCGTCGGG 18419
|| || || || ||||||||||| ||| || |||||||| |||||||| || || ||
Sbjct 1414925 TCGACCTTCCCATGCCGACTACACTTACCAGGAAAAGTACGGAATCAAGGCTTCTTCTGG 1414866
Query 18420 CGGAGGCCGGTCGTCTGCCCGCGAGACCCTCATGCGCGTCGCCGCCGGCGCGGTCGCCGA 18479
||||| || || || || || ||||| || || || || ||||| || | |||||
Sbjct 1414865 AGGAGGACGATCTTCAGCTCGAGAGACTATCGGACGAGTGGCTGCCGGAGCTATTGCCGA 1414806
Query 18480 GAA 18482
||
Sbjct 1414805 CAA 1414803
>seq6
Length=2655350
Score = 134 bits (148), Expect = 2e-25
Identities = 207/291 (71%), Gaps = 11/291 (4%)
Strand=Plus/Minus
Query 869633 GAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTTGG 869692
|| ||||||||||| || ||||||||| ||||| ||| | | |||| | | ||
Sbjct 574606 GAATGGATGTTCTCCATCATGATCTGGAATCCGTAGAAGCACTTGGCCTCAGGAGCCTGA 574547
Query 869693 ACCTCCTTCAT-GAACCGGCCGGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGAA 869751
||||| | || |||||| | ||||||||||| || || ||||| ||| || ||
Sbjct 574546 ACCTC-TCCAGAGAACCGCTCAACCAGGTTCTCGTTGACAATACCGTCAGAGGCAGCAAA 574488
Query 869752 AAAAGCCAGGACGTGCT---TGATAAAGTGGCGCTCGTCGTCGCTGAGCGA---CACCCA 869805
|||||||| |||||| ||| ||| | ||||||| | ||||| | ||||
Sbjct 574487 GAAAGCCAGCACGTGCGAAATGAAAAACTT---CTCGTCGCTGTTGAGCCGGTTCTCCCA 574431
Query 869806 GTGGACGGTGTCGGCGCTGAGGTCCACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTT 869865
|| | | | || || ||| || | ||||||||||||||||| || |||||||||||
Sbjct 574430 GTCGCCCATATCCTTGCCGAGATCAATCTCCTCGGCGGTCCAGAAAGAAGCCTCGGCCTT 574371
Query 869866 TTTGTACATCTCCCATACTTGCTGGTAGCGGATAGGGAAGAGGACAAAGCG 869916
|||||||||| ||| | | ||||| | ||||||||||| ||||| ||
Sbjct 574370 CTTGTACATCTGCCAAATCTCATGGTACTGAATAGGGAAGAGCACAAACCG 574320
Score = 127 bits (140), Expect = 2e-23
Identities = 191/267 (72%), Gaps = 11/267 (4%)
Strand=Plus/Minus
Query 869201 TCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTTCTTGAGCCAAAAGATGGCGCAG 869260
|||||| |||| ||||| |||||||| || |||||||||||||| || |||| |
Sbjct 574867 TCGTTGGAGAAGGTCAGGCCAGGCATGAGACCTCGCTTCTTGAGCCAGAAAATGGAGGCA 574808
Query 869261 AAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAGCCGATGAGCCGCTCGGCAAAG 869320
||| || ||||| || || ||||| ||||| |||||| |||| || |||||| |||||
Sbjct 574807 AAAGATCCGGAGAAGAAAATACCCTCAACGGCAGCAAAGGCGATAAGTCGCTCGCCAAAG 574748
Query 869321 GTGTCGAGGC-CCTCCTTGTTGATCCACTTCATCGCCCAGTCGGCCTTTTTCCTCACCGA 869379
|| || | | || | | ||||||||| | |||||||||||||| ||| | | |
Sbjct 574747 GT----AGACTCGTCGTCGGAGATCCACTTGAGAGCCCAGTCGGCCTTCTTCTTGATGCA 574692
Query 869380 CGGCACCGTGTCGATGGCGCGAAAGAGGT--GGTC-CTTTTCGGCCGGGTCCTTGACATA 869436
|| | || || |||||| || |||| | || || | | |||||||||| ||
Sbjct 574691 GGGAATGGTCTCAATGGCGTTGAACAGGTAAGTTCGCTCCTTG---GGGTCCTTGATGTA 574635
Query 869437 GGTGTCGATCAGGAGCGAATAGGTCTC 869463
|| || || || || || ||||||||
Sbjct 574634 AGTATCAATGAGCAGAGAGTAGGTCTC 574608
Score = 98.7 bits (108), Expect = 1e-14
Identities = 146/207 (71%), Gaps = 0/207 (0%)
Strand=Plus/Plus
Query 1852044 CGATCTTGGAGGCGGCCTCGCTGGCGCTCATCTTGCCGCTCTCGGTGAGGCCCGGCACGA 1852103
||||||||||| || || ||| |||||| || | || |||||| || || || |
Sbjct 1295744 CGATCTTGGAGTTGGGGTCAGAGGCAGACATCTTACCACCCTGGGTGAGACCGGGAACCA 1295803
Query 1852104 GCGGGTTGAGCAGGTGGAAGCGCTTCCGATAGCCGAGGACCGGCAGGTGGTCGCGCGCAA 1852163
||||| | || ||| |||||| || |||| | | ||||| || ||||
Sbjct 1295804 TAGGGTTCATCATGTGTGCTCGCTTCTTGTAACCGATGGAGGTCAGGTTCTCCTCGGCAA 1295863
Query 1852164 AGGCAAATATCTTGCGCTGGTCGCGCCCGCCAAACTGGGCGTCGACGTCGAGGTGCTGCT 1852223
| || ||||| |||||||| || ||||||||||| |||||| | |||| || ||
Sbjct 1295864 GAACGAAAATCTTTCGCTGGTCAACACCACCAAACTGGGCATCGACGCCAAGGTACTCCT 1295923
Query 1852224 CGTCGAGGGCCTGCATGAGCGGGTAGA 1852250
|||| || ||||||||||| |||||||
Sbjct 1295924 CGTCAAGAGCCTGCATGAGAGGGTAGA 1295950
Score = 96.9 bits (106), Expect = 4e-14
Identities = 209/305 (69%), Gaps = 7/305 (2%)
Strand=Plus/Minus
Query 868708 CACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCATCCACGGGAA 868767
||| ||| |||||| ||||||||||| || | || || || |||||| | ||
Sbjct 575186 CACTCGCTTCTCGAAGAAGTTGGTCTTTCCAGCCAGAGAAATGTTCTCCATGAAGTCAAA 575127
Query 868768 CGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCGAGCAGGCGGTCGGCGAC 868827
||||||| | |||||| ||| | ||| || | | ||||| |||||||| ||
Sbjct 575126 GGGGTTGGTGGAGTTGTAGACCTTGGGGTTTCCAAGAGCAACAAGCAGACGGTCGGCCAC 575067
Query 868828 AAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATGAGCGCCAC-CGGCAGCG 868886
|||||| |||||||| | |||||| ||||||||| |||| || |||| || || |
Sbjct 575066 AAACTCAATGTACTGTCGCATGAGCTTGGCGTTCATACCGAGCAG-ACCACAAGGGAGAG 575008
Query 868887 ACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACGATGATCTGCCTGGGCA--C 868944
|| | | ||||| | ||| || | || |||||||| |||| | ||| | || |
Sbjct 575007 CATCAGTAAGGAACTCCTGCTCAATGCCAACAGCCTCGACAATGA-CGTCCTCGACAATC 574949
Query 868945 GTCGGCCGAGGGCTTGTTGACGAGCATCGTGTAGAGCAGGCAGGCAAAGTCGCAGTGCA- 869003
|| ||||| ||| |||| | | ||||||| |||||||||||| |||||
Sbjct 574948 TTC-TTGGAGGGTCGGTTCTCGAGGTGAGAGAAGAGCAGACAGGCAAAGTCGGTGTGCAG 574890
Query 869004 ACCCT 869008
|||||
Sbjct 574889 ACCCT 574885
Score = 87.8 bits (96), Expect = 2e-11
Identities = 211/313 (67%), Gaps = 10/313 (3%)
Strand=Plus/Minus
Query 507581 CTCCAGATCGGGTGGTCGGTCGAGCGCCACCTGCGCGCGGGC---GACGCCGTGGTGATG 507637
|| ||| ||| ||| ||| ||||| ||||| | || | ||| | ||| || |
Sbjct 1501280 CTGCAGTACGGCTGGAAGGTGGAGCGTCACCT---CATGGACAATGACCCTGTGCTGTTC 1501224
Query 507638 AACCGGCAGCCGTCGCTGCACATGGGCTCCATGCTCATGCACAAGGTGGTGCCCATGCCC 507697
||||| |||||||| ||||| | |||||| | ||| ||| ||||||
Sbjct 1501223 AACCGACAGCCGTCTCTGCATAAAATGTCCATGATGGCGCATCGAGTGCGAGTCATGCC- 1501165
Query 507698 GGGCGC-ACCATGCGATTCAACCTGGCCGTCACGGGCACCTACAACGCCGACTTTGACGG 507756
| | | ||| | ||| | |||||| | ||||| ||||||||||||| || |||||
Sbjct 1501164 GTACTCGACCTTCCGACTGAACCTGTCGGTCACTTCGCCCTACAACGCCGATTTCGACGG 1501105
Query 507757 CGACGAGATGAACCTGCACGTGCCCCAGTCCGAGACGGCGCGCGCCGAGGTGACGCACAC 507816
||||| |||||| |||| ||||| ||||||||| |||| |||||| || | || |
Sbjct 1501104 TGACGAAATGAACTTGCATGTGCCTCAGTCCGAGGAAACGCGAGCCGAGCTGTCCCA-GC 1501046
Query 507817 CATG-AGCGTGTCGCTCAAGACCGTGTCGCCGCAGGCCAACAAGCCCATCATCGGCCTGG 507875
|| | || | || ||| || || || ||| |||||||||| |||| || | |
Sbjct 1501045 TGTGTATGGTCCCCCTGCAGATTGTCTCCCCCCAGTCCAACAAGCCTGTCATGGGTATTG 1500986
Query 507876 TCATGGACGCCCT 507888
| |||| ||||
Sbjct 1500985 TGCAGGACACCCT 1500973
>seq1
Length=4845111
Score = 118 bits (130), Expect = 1e-20
Identities = 101/125 (81%), Gaps = 0/125 (0%)
Strand=Plus/Plus
Query 1592168 CTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGG 1592227
|| || ||| | || || |||| ||||||||||| |||||||||||||| ||| | ||
Sbjct 4384169 CTTTTCGAGATCATTCTGACCGCAAACTACCTCGATATCAAGCCTCTGCTTGATGTCGGC 4384228
Query 1592228 TGCAAGTCTGTGGCCAACATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTT 1592287
|||||| | || ||||||||||||||||||||| | ||||||||||| || |||||
Sbjct 4384229 TGCAAGACCGTCGCCAACATGATCAAGGGCAAGACCCCCGAGGAGATTCGACGAACCTTC 4384288
Query 1592288 AACAT 1592292
|||||
Sbjct 4384289 AACAT 4384293
Score = 116 bits (128), Expect = 5e-20
Identities = 156/217 (72%), Gaps = 0/217 (0%)
Strand=Plus/Plus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| ||||||| || ||| | | ||| || || ||||| ||||||||||| || | ||
Sbjct 760975 GCTTGGCCAGCTCTCCGGGGAGGATAAGTCGGACGGCAGTCTGGATCTCTCGAGAAGTGA 761034
Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462
| ||| |||| | || ||||| | |||||||||| | | || |||| |
Sbjct 761035 TGGTGGACTTCTTGGTGTAGGTGGCCAGCTTGGAGGCCTCGGTGGCAACACGCTCGAAGA 761094
Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522
| ||||||||||| |||||||||| ||||| | | ||||||| || ||||||||
Sbjct 761095 TATCGTTGACAAAGGAGTTCATGATGGACATGGCTCGGGTGGAGATACCGGTGTCGGGGT 761154
Query 1254523 GCACCTGCTTGAGCACCTTGTAGATGAACGACGAGTA 1254559
| |||||| ||||||||||||||| | || |||||
Sbjct 761155 GGGTCTGCTTCAGCACCTTGTAGATGTAAGAAGAGTA 761191
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 6107137640771023
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