Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yarrowia_20sp._20JCM_2030694_20[genbank_20GCA_5F001600515.1_202016- 03-01] 19 sequences; 21,758,297 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq2 158 2e-32 seq6 156 7e-32 seq1 118 2e-20 >seq2 Length=4150472 Score = 158 bits (174), Expect = 2e-32 Identities = 215/300 (72%), Gaps = 0/300 (0%) Strand=Plus/Minus Query 2073540 CTGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGA 2073599 |||||| || || || || |||| ||| |||| |||||||||||||| | |||||||| Sbjct 324937 CTGGTCAACGTATCGGGCAGTGTTGTTGTAGACTCGGAGCATGGGCACGATACCGTTGGA 324878 Query 2073600 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAAGCC 2073659 ||||||||||| || | ||||| ||| | ||| || | ||||| || | || Sbjct 324877 GGTACCGTTGGTGCCGGCAATGTAGGAGCCGGTGGCTCGAATGTTGTGGATGGAGAGACC 324818 Query 2073660 GATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCTC 2073719 ||| || ||||| | |||||||||||| || || | || || || ||||||||||| || Sbjct 324817 GATACCTCCGGCAGACTTGGAGATGAGAGCACAGGTCTTGAGGGTATCGTAGATGCCGTC 324758 Query 2073720 GATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGTGCC 2073779 ||| |||||| ||||||||| | || || ||||| || | || || | | || || Sbjct 324757 GATGGAGTCGTCCTTCATGTTGACGAGGAAACACGAAGACATCTGGGGCTGGGGGGTTCC 324698 Query 2073780 GGCATTGAAGAGCGTGGGCGTCGCCGCCGTGTACGACTGTTGGGACATGGCCTCGTAGGT 2073839 || ||| |||| ||||| | || ||| | ||| ||||||||| | |||||| Sbjct 324697 AGCGTTGTAGAGAGTGGGGGAAGCGTGGGTGAAGTACTTCTGGGACATGTAGTTGTAGGT 324638 Score = 95.1 bits (104), Expect = 2e-13 Identities = 141/200 (71%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 2071795 TCGTGCAGGCCGGGCGCCTCGGACGGGCAAAAGAGCGACCAGTCGCCGCCAGTCACCACG 2071854 |||| || ||||| |||| ||||| | ||| | ||| |||||| | | || Sbjct 325155 TCGTCAAGACCGGGGCACTCGTTGGGGCACATGAGGGTCCACTCGCCGTTCTGCTCGACT 325096 Query 2071855 CGGCGCATAAACAGGTCGCACGTCCACAGGCCGTAAAAGAGATCGCGCGCCCGGTTCTCC 2071914 || ||| ||||||||| |||||||| | || || || || || ||| ||||| Sbjct 325095 CGCTCCATGAACAGGTCGGGAATCCACAGGGCCAGGAACAGGTCTCGGGCTCGGATCTCC 325036 Query 2071915 TCCTTGCCGTGGTTCTTTTTCAGGTCGAGCCAGTCGACGAGGTCGGCGTGCCACGGCTCC 2071974 ||||| |||||||||||| ||| ||| | |||| || |||| ||||||| ||||| Sbjct 325035 TCCTTTCCGTGGTTCTTTCGCAGCTCGCAGAACTCGAAGATGTCGTCGTGCCAAGGCTCA 324976 Query 2071975 AGGTAGCAGGCAAAGGCGCC 2071994 ||||| ||||||||| || Sbjct 324975 AGGTACATGGCAAAGGCTCC 324956 >seq6 Length=2655350 Score = 156 bits (172), Expect = 7e-32 Identities = 216/298 (72%), Gaps = 11/298 (4%) Strand=Plus/Minus Query 794377 AGGCCGGGCATGAGGCCGCGCTTCTTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAA 794436 ||||| |||||||| || |||||||||||||| || |||| ||| || ||||| Sbjct 574852 AGGCCAGGCATGAGACCTCGCTTCTTGAGCCAGAAAATGGAGGCAAAAGATCCGGAGAAG 574793 Query 794437 AAGATGCCCTCGACGGCGGCAAAGCCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCC-TC 794495 || || ||||| ||||| |||||| ||| || |||||| |||| || || | | || Sbjct 574792 AAAATACCCTCAACGGCAGCAAAGGCGATAAGTCGCTCGCCAAAGGT----AGACTCGTC 574737 Query 794496 TTTGTTGATCCACTTCATCGCCCACTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGAT 794555 | | ||||||||| | ||||| || ||||| ||| | | |||| | || || || Sbjct 574736 GTCGGAGATCCACTTGAGAGCCCAGTCGGCCTTCTTCTTGATGCAGGGAATGGTCTCAAT 574677 Query 794556 GGCGCGAAAGAGGT--GGTC-CTTCTCGACCGGGTCCTTGACGTAGGTGTCGATGAGGAG 794612 |||| || |||| | || || || | |||||||||| ||| || || ||||| || Sbjct 574676 GGCGTTGAACAGGTAAGTTCGCTCCTTG---GGGTCCTTGATGTAAGTATCAATGAGCAG 574620 Query 794613 CGAGTAGGTCTCTGAGTGGATGTTTTCGATGGCGATCTGGAAGCCATAAAAGCAGTTG 794670 ||||||||||| || |||||||| || || ||||||||| || || ||||| ||| Sbjct 574619 AGAGTAGGTCTCGGAATGGATGTTCTCCATCATGATCTGGAATCCGTAGAAGCACTTG 574562 Score = 134 bits (148), Expect = 2e-25 Identities = 390/596 (65%), Gaps = 6/596 (1%) Strand=Plus/Plus Query 2411383 AGATCAATCTTGGAGGCGGCCTCGCTGGCGCTCATCTTGCCGTCCTTGGTGAGGCCCGGC 2411442 ||||| ||||||||| || || ||| |||||| || ||| |||||| || || Sbjct 1295740 AGATCGATCTTGGAGTTGGGGTCAGAGGCAGACATCTTACCACCCTGGGTGAGACCGGGA 1295799 Query 2411443 ACCAGCGGGTTGAGCAGGTGGATGCGCTTGCGGTAGCCCAGCGCCGGCAGGTGGTCGCGC 2411502 |||| ||||| | || ||| ||||| ||| || | | | ||||| || Sbjct 1295800 ACCATAGGGTTCATCATGTGTGCTCGCTTCTTGTAACCGATGGAGGTCAGGTTCTCCTCG 1295859 Query 2411503 GCAAAGGCAAAGATCTTGCGCTGGTCGCGCCCGCCAAACTGGGCGTCGACGTCGAGGTGC 2411562 |||| | || ||||| |||||||| || ||||||||||| |||||| | |||| | Sbjct 1295860 GCAAGAACGAAAATCTTTCGCTGGTCAACACCACCAAACTGGGCATCGACGCCAAGGTAC 1295919 Query 2411563 TGCTCGTCGAGGGCCTGCATGAGCGGGTAGACGAGGTTGCTGAGCGGCGGGTTGCGGTCC 2411622 | |||||| || ||||||||||| ||||||| ||| | ||| | |||||| | || Sbjct 1295920 TCCTCGTCAAGAGCCTGCATGAGAGGGTAGATGAGACCGGAAAGCAGAGGGTTGTCGACC 1295979 Query 2411623 ATCTTGACCACCTGGGCGGCGG--CCTTTTGCGCCGTGCCGACGGTCACGCGCGCCGTCA 2411680 |||||| || | ||| | | | || ||| ||| ||| | ||| || | | Sbjct 1295980 TGCTTGACAACATCGGCTCCAGCTCGCTTAGCGTCGT--TGACAGACACTCGGTTAGAAA 1296037 Query 2411681 GGCGCAAGAGGTCGAGCGTGTAGGCGGCGCCATGCTGGTAATCGCTGCCGCGCACAAATT 2411740 | ||||| || | ||||| |||| | ||| | || | ||| ||||| Sbjct 1296038 GCTTGAAGAGATCCATGGTGTACTCGGCACTGAGCTCGAAAGATCGGCCAATGACAAAAG 1296097 Query 2411741 CGAGACGATCCAGCGGGACGCCAATGTGCTGGAGCATGGCCTTGATGGCAAACTCGTACC 2411800 || ||| || || || ||||| |||| ||||||||||| ||||||| Sbjct 1296098 TCAGCTTATCGAGAGGAACACCAATAGATCGGAGGATGGCCTTGATCATGTACTCGTAGT 1296157 Query 2411801 AGCGGCACCGGTGCTCGACGAGGTCCCACGGCGTCTTGCCATTGTCGAGGTGGGCGTGCA 2411860 | || ||||||| || | ||| || | ||| ||||| ||| ||| |||| Sbjct 1296158 ACTGGACTCGGTGCTGAACCAACTCCAGAGGGGCCTTCATGTTGTCAAGGAAGGCATGCA 1296217 Query 2411861 CGTCGGCAAAGAGGATCCTCACCCGACATCCGGCCTGGAGAAAGTCGGCCAGTTTAAAGA 2411920 ||||| | || ||| | ||| ||| || || || ||||| || | || | Sbjct 1296218 AATCGGCCAGCAGAATCTTGACCTCACAGCCAGCAGCCAGGAAGTCAGCAATCTTGGTCA 1296277 Query 2411921 TGGGCACAAAGTAGCC-CAGATGGGGCTTGCCCGTCGGCGCGGTGCCCCAATAAAT 2411975 |||||||||||||||| ||| |||||||| || || || || || ||||| || || Sbjct 1296278 TGGGCACAAAGTAGCCACAG-TGGGGCTTTCCGGTTGGTGCAGTTCCCCAGTAGAT 1296332 Score = 111 bits (122), Expect = 2e-18 Identities = 197/283 (70%), Gaps = 11/283 (4%) Strand=Plus/Minus Query 796141 AAACACCTGGCCTCGGGTACTTGGACCTCCTTCAT-GAAGCGGCCGGCCAGGTTCTCAGC 796199 || ||| ||||||| || | || ||||| | || ||| || | |||||||||| Sbjct 574570 AAGCACTTGGCCTCAGGAGCCTGAACCTC-TCCAGAGAACCGCTCAACCAGGTTCTCGTT 574512 Query 796200 CACGATGCCGTCGCTGGCGGCGAAAAAGGCGAGGACGTGCT---TGATAAAGTGACGCTC 796256 || || ||||| ||| || || || || || |||||| ||| ||| | ||| Sbjct 574511 GACAATACCGTCAGAGGCAGCAAAGAAAGCCAGCACGTGCGAAATGAAAAACTT---CTC 574455 Query 796257 GTCGTCGCTGAGCGAGA---CCCAGTGGACCGTGTCGGCGCCGAGGTCGACCTCCTCGGC 796313 |||| | ||||| | |||||| | || | || |||||| || | ||||||||| Sbjct 574454 GTCGCTGTTGAGCCGGTTCTCCCAGTCGCCCATATCCTTGCCGAGATCAATCTCCTCGGC 574395 Query 796314 GGTCCAAAAGGAGGCCTCGGCCTTTTTGTACATCTCCCATATCCGTTGGTAGCGGATGGG 796373 |||||| || || ||||||||||| |||||||||| ||| ||| ||||| | || || Sbjct 574394 GGTCCAGAAAGAAGCCTCGGCCTTCTTGTACATCTGCCAAATCTCATGGTACTGAATAGG 574335 Query 796374 GAACAGAACAAAGCGATTGGGGTTCTCGCGTAGCAGCGGCTCG 796416 ||| || ||||| || | |||||| ||||| |||||| Sbjct 574334 GAAGAGCACAAACCGTCGGTTGTTCTCCTTGAGCAGAGGCTCG 574292 >seq1 Length=4845111 Score = 118 bits (130), Expect = 2e-20 Identities = 170/240 (71%), Gaps = 0/240 (0%) Strand=Plus/Plus Query 1485471 GTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCAT 1485530 |||||||| || || ||||| || | ||||||| ||||||| || ||| | | Sbjct 760937 GTACTTGGCAACAGCTCGAGTACCGTCACCGGTGGCGTGCTTGGCCAGCTCTCCGGGGAG 760996 Query 1485531 GATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGCG 1485590 ||| || || ||||| ||||||||||| || | ||| ||| |||| | | Sbjct 760997 GATAAGTCGGACGGCAGTCTGGATCTCTCGAGAAGTGATGGTGGACTTCTTGGTGTAGGT 761056 Query 1485591 CGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCAT 1485650 ||||| | |||||||||| | | || |||| || ||||||||||| |||||||| Sbjct 761057 GGCCAGCTTGGAGGCCTCGGTGGCAACACGCTCGAAGATATCGTTGACAAAGGAGTTCAT 761116 Query 1485651 GATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGTA 1485710 ||| ||||| | | | ||||||| || ||||||||| |||||| ||||||||||| Sbjct 761117 GATGGACATGGCTCGGGTGGAGATACCGGTGTCGGGGTGGGTCTGCTTCAGCACCTTGTA 761176 Score = 104 bits (114), Expect = 4e-16 Identities = 98/125 (78%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 2035629 CTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGG 2035688 || || ||| | || || |||| ||||||||||| |||||||| || || ||| | || Sbjct 4384169 CTTTTCGAGATCATTCTGACCGCAAACTACCTCGATATCAAGCCTCTGCTTGATGTCGGC 4384228 Query 2035689 TGCAAGACCGTGGCCAACCTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTT 2035748 ||||||||||| |||||| | |||||||||||| | |||||||| || || ||||| Sbjct 4384229 TGCAAGACCGTCGCCAACATGATCAAGGGCAAGACCCCCGAGGAGATTCGACGAACCTTC 4384288 Query 2035749 AACAT 2035753 ||||| Sbjct 4384289 AACAT 4384293 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916244378883341