Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20sp._20JCM_2030694_20[genbank_20GCA_5F001600515.1_202016-
03-01] 19 sequences; 21,758,297 total letters
Query= NC_022098.1
Length=2473870
Score E
Sequences producing significant alignments: (Bits) Value
seq2 158 2e-32
seq6 156 7e-32
seq1 118 2e-20
>seq2
Length=4150472
Score = 158 bits (174), Expect = 2e-32
Identities = 215/300 (72%), Gaps = 0/300 (0%)
Strand=Plus/Minus
Query 2073540 CTGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGA 2073599
|||||| || || || || |||| ||| |||| |||||||||||||| | ||||||||
Sbjct 324937 CTGGTCAACGTATCGGGCAGTGTTGTTGTAGACTCGGAGCATGGGCACGATACCGTTGGA 324878
Query 2073600 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAAGCC 2073659
||||||||||| || | ||||| ||| | ||| || | ||||| || | ||
Sbjct 324877 GGTACCGTTGGTGCCGGCAATGTAGGAGCCGGTGGCTCGAATGTTGTGGATGGAGAGACC 324818
Query 2073660 GATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCTC 2073719
||| || ||||| | |||||||||||| || || | || || || ||||||||||| ||
Sbjct 324817 GATACCTCCGGCAGACTTGGAGATGAGAGCACAGGTCTTGAGGGTATCGTAGATGCCGTC 324758
Query 2073720 GATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGTGCC 2073779
||| |||||| ||||||||| | || || ||||| || | || || | | || ||
Sbjct 324757 GATGGAGTCGTCCTTCATGTTGACGAGGAAACACGAAGACATCTGGGGCTGGGGGGTTCC 324698
Query 2073780 GGCATTGAAGAGCGTGGGCGTCGCCGCCGTGTACGACTGTTGGGACATGGCCTCGTAGGT 2073839
|| ||| |||| ||||| | || ||| | ||| ||||||||| | ||||||
Sbjct 324697 AGCGTTGTAGAGAGTGGGGGAAGCGTGGGTGAAGTACTTCTGGGACATGTAGTTGTAGGT 324638
Score = 95.1 bits (104), Expect = 2e-13
Identities = 141/200 (71%), Gaps = 0/200 (0%)
Strand=Plus/Minus
Query 2071795 TCGTGCAGGCCGGGCGCCTCGGACGGGCAAAAGAGCGACCAGTCGCCGCCAGTCACCACG 2071854
|||| || ||||| |||| ||||| | ||| | ||| |||||| | | ||
Sbjct 325155 TCGTCAAGACCGGGGCACTCGTTGGGGCACATGAGGGTCCACTCGCCGTTCTGCTCGACT 325096
Query 2071855 CGGCGCATAAACAGGTCGCACGTCCACAGGCCGTAAAAGAGATCGCGCGCCCGGTTCTCC 2071914
|| ||| ||||||||| |||||||| | || || || || || ||| |||||
Sbjct 325095 CGCTCCATGAACAGGTCGGGAATCCACAGGGCCAGGAACAGGTCTCGGGCTCGGATCTCC 325036
Query 2071915 TCCTTGCCGTGGTTCTTTTTCAGGTCGAGCCAGTCGACGAGGTCGGCGTGCCACGGCTCC 2071974
||||| |||||||||||| ||| ||| | |||| || |||| ||||||| |||||
Sbjct 325035 TCCTTTCCGTGGTTCTTTCGCAGCTCGCAGAACTCGAAGATGTCGTCGTGCCAAGGCTCA 324976
Query 2071975 AGGTAGCAGGCAAAGGCGCC 2071994
||||| ||||||||| ||
Sbjct 324975 AGGTACATGGCAAAGGCTCC 324956
>seq6
Length=2655350
Score = 156 bits (172), Expect = 7e-32
Identities = 216/298 (72%), Gaps = 11/298 (4%)
Strand=Plus/Minus
Query 794377 AGGCCGGGCATGAGGCCGCGCTTCTTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAA 794436
||||| |||||||| || |||||||||||||| || |||| ||| || |||||
Sbjct 574852 AGGCCAGGCATGAGACCTCGCTTCTTGAGCCAGAAAATGGAGGCAAAAGATCCGGAGAAG 574793
Query 794437 AAGATGCCCTCGACGGCGGCAAAGCCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCC-TC 794495
|| || ||||| ||||| |||||| ||| || |||||| |||| || || | | ||
Sbjct 574792 AAAATACCCTCAACGGCAGCAAAGGCGATAAGTCGCTCGCCAAAGGT----AGACTCGTC 574737
Query 794496 TTTGTTGATCCACTTCATCGCCCACTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGAT 794555
| | ||||||||| | ||||| || ||||| ||| | | |||| | || || ||
Sbjct 574736 GTCGGAGATCCACTTGAGAGCCCAGTCGGCCTTCTTCTTGATGCAGGGAATGGTCTCAAT 574677
Query 794556 GGCGCGAAAGAGGT--GGTC-CTTCTCGACCGGGTCCTTGACGTAGGTGTCGATGAGGAG 794612
|||| || |||| | || || || | |||||||||| ||| || || ||||| ||
Sbjct 574676 GGCGTTGAACAGGTAAGTTCGCTCCTTG---GGGTCCTTGATGTAAGTATCAATGAGCAG 574620
Query 794613 CGAGTAGGTCTCTGAGTGGATGTTTTCGATGGCGATCTGGAAGCCATAAAAGCAGTTG 794670
||||||||||| || |||||||| || || ||||||||| || || ||||| |||
Sbjct 574619 AGAGTAGGTCTCGGAATGGATGTTCTCCATCATGATCTGGAATCCGTAGAAGCACTTG 574562
Score = 134 bits (148), Expect = 2e-25
Identities = 390/596 (65%), Gaps = 6/596 (1%)
Strand=Plus/Plus
Query 2411383 AGATCAATCTTGGAGGCGGCCTCGCTGGCGCTCATCTTGCCGTCCTTGGTGAGGCCCGGC 2411442
||||| ||||||||| || || ||| |||||| || ||| |||||| || ||
Sbjct 1295740 AGATCGATCTTGGAGTTGGGGTCAGAGGCAGACATCTTACCACCCTGGGTGAGACCGGGA 1295799
Query 2411443 ACCAGCGGGTTGAGCAGGTGGATGCGCTTGCGGTAGCCCAGCGCCGGCAGGTGGTCGCGC 2411502
|||| ||||| | || ||| ||||| ||| || | | | ||||| ||
Sbjct 1295800 ACCATAGGGTTCATCATGTGTGCTCGCTTCTTGTAACCGATGGAGGTCAGGTTCTCCTCG 1295859
Query 2411503 GCAAAGGCAAAGATCTTGCGCTGGTCGCGCCCGCCAAACTGGGCGTCGACGTCGAGGTGC 2411562
|||| | || ||||| |||||||| || ||||||||||| |||||| | |||| |
Sbjct 1295860 GCAAGAACGAAAATCTTTCGCTGGTCAACACCACCAAACTGGGCATCGACGCCAAGGTAC 1295919
Query 2411563 TGCTCGTCGAGGGCCTGCATGAGCGGGTAGACGAGGTTGCTGAGCGGCGGGTTGCGGTCC 2411622
| |||||| || ||||||||||| ||||||| ||| | ||| | |||||| | ||
Sbjct 1295920 TCCTCGTCAAGAGCCTGCATGAGAGGGTAGATGAGACCGGAAAGCAGAGGGTTGTCGACC 1295979
Query 2411623 ATCTTGACCACCTGGGCGGCGG--CCTTTTGCGCCGTGCCGACGGTCACGCGCGCCGTCA 2411680
|||||| || | ||| | | | || ||| ||| ||| | ||| || | |
Sbjct 1295980 TGCTTGACAACATCGGCTCCAGCTCGCTTAGCGTCGT--TGACAGACACTCGGTTAGAAA 1296037
Query 2411681 GGCGCAAGAGGTCGAGCGTGTAGGCGGCGCCATGCTGGTAATCGCTGCCGCGCACAAATT 2411740
| ||||| || | ||||| |||| | ||| | || | ||| |||||
Sbjct 1296038 GCTTGAAGAGATCCATGGTGTACTCGGCACTGAGCTCGAAAGATCGGCCAATGACAAAAG 1296097
Query 2411741 CGAGACGATCCAGCGGGACGCCAATGTGCTGGAGCATGGCCTTGATGGCAAACTCGTACC 2411800
|| ||| || || || ||||| |||| ||||||||||| |||||||
Sbjct 1296098 TCAGCTTATCGAGAGGAACACCAATAGATCGGAGGATGGCCTTGATCATGTACTCGTAGT 1296157
Query 2411801 AGCGGCACCGGTGCTCGACGAGGTCCCACGGCGTCTTGCCATTGTCGAGGTGGGCGTGCA 2411860
| || ||||||| || | ||| || | ||| ||||| ||| ||| ||||
Sbjct 1296158 ACTGGACTCGGTGCTGAACCAACTCCAGAGGGGCCTTCATGTTGTCAAGGAAGGCATGCA 1296217
Query 2411861 CGTCGGCAAAGAGGATCCTCACCCGACATCCGGCCTGGAGAAAGTCGGCCAGTTTAAAGA 2411920
||||| | || ||| | ||| ||| || || || ||||| || | || |
Sbjct 1296218 AATCGGCCAGCAGAATCTTGACCTCACAGCCAGCAGCCAGGAAGTCAGCAATCTTGGTCA 1296277
Query 2411921 TGGGCACAAAGTAGCC-CAGATGGGGCTTGCCCGTCGGCGCGGTGCCCCAATAAAT 2411975
|||||||||||||||| ||| |||||||| || || || || || ||||| || ||
Sbjct 1296278 TGGGCACAAAGTAGCCACAG-TGGGGCTTTCCGGTTGGTGCAGTTCCCCAGTAGAT 1296332
Score = 111 bits (122), Expect = 2e-18
Identities = 197/283 (70%), Gaps = 11/283 (4%)
Strand=Plus/Minus
Query 796141 AAACACCTGGCCTCGGGTACTTGGACCTCCTTCAT-GAAGCGGCCGGCCAGGTTCTCAGC 796199
|| ||| ||||||| || | || ||||| | || ||| || | ||||||||||
Sbjct 574570 AAGCACTTGGCCTCAGGAGCCTGAACCTC-TCCAGAGAACCGCTCAACCAGGTTCTCGTT 574512
Query 796200 CACGATGCCGTCGCTGGCGGCGAAAAAGGCGAGGACGTGCT---TGATAAAGTGACGCTC 796256
|| || ||||| ||| || || || || || |||||| ||| ||| | |||
Sbjct 574511 GACAATACCGTCAGAGGCAGCAAAGAAAGCCAGCACGTGCGAAATGAAAAACTT---CTC 574455
Query 796257 GTCGTCGCTGAGCGAGA---CCCAGTGGACCGTGTCGGCGCCGAGGTCGACCTCCTCGGC 796313
|||| | ||||| | |||||| | || | || |||||| || | |||||||||
Sbjct 574454 GTCGCTGTTGAGCCGGTTCTCCCAGTCGCCCATATCCTTGCCGAGATCAATCTCCTCGGC 574395
Query 796314 GGTCCAAAAGGAGGCCTCGGCCTTTTTGTACATCTCCCATATCCGTTGGTAGCGGATGGG 796373
|||||| || || ||||||||||| |||||||||| ||| ||| ||||| | || ||
Sbjct 574394 GGTCCAGAAAGAAGCCTCGGCCTTCTTGTACATCTGCCAAATCTCATGGTACTGAATAGG 574335
Query 796374 GAACAGAACAAAGCGATTGGGGTTCTCGCGTAGCAGCGGCTCG 796416
||| || ||||| || | |||||| ||||| ||||||
Sbjct 574334 GAAGAGCACAAACCGTCGGTTGTTCTCCTTGAGCAGAGGCTCG 574292
>seq1
Length=4845111
Score = 118 bits (130), Expect = 2e-20
Identities = 170/240 (71%), Gaps = 0/240 (0%)
Strand=Plus/Plus
Query 1485471 GTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCAT 1485530
|||||||| || || ||||| || | ||||||| ||||||| || ||| | |
Sbjct 760937 GTACTTGGCAACAGCTCGAGTACCGTCACCGGTGGCGTGCTTGGCCAGCTCTCCGGGGAG 760996
Query 1485531 GATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGCG 1485590
||| || || ||||| ||||||||||| || | ||| ||| |||| | |
Sbjct 760997 GATAAGTCGGACGGCAGTCTGGATCTCTCGAGAAGTGATGGTGGACTTCTTGGTGTAGGT 761056
Query 1485591 CGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCAT 1485650
||||| | |||||||||| | | || |||| || ||||||||||| ||||||||
Sbjct 761057 GGCCAGCTTGGAGGCCTCGGTGGCAACACGCTCGAAGATATCGTTGACAAAGGAGTTCAT 761116
Query 1485651 GATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGTA 1485710
||| ||||| | | | ||||||| || ||||||||| |||||| |||||||||||
Sbjct 761117 GATGGACATGGCTCGGGTGGAGATACCGGTGTCGGGGTGGGTCTGCTTCAGCACCTTGTA 761176
Score = 104 bits (114), Expect = 4e-16
Identities = 98/125 (78%), Gaps = 0/125 (0%)
Strand=Plus/Plus
Query 2035629 CTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGG 2035688
|| || ||| | || || |||| ||||||||||| |||||||| || || ||| | ||
Sbjct 4384169 CTTTTCGAGATCATTCTGACCGCAAACTACCTCGATATCAAGCCTCTGCTTGATGTCGGC 4384228
Query 2035689 TGCAAGACCGTGGCCAACCTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTT 2035748
||||||||||| |||||| | |||||||||||| | |||||||| || || |||||
Sbjct 4384229 TGCAAGACCGTCGCCAACATGATCAAGGGCAAGACCCCCGAGGAGATTCGACGAACCTTC 4384288
Query 2035749 AACAT 2035753
|||||
Sbjct 4384289 AACAT 4384293
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7916244378883341
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |