Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20sp._20JCM_2030694_20[genbank_20GCA_5F001600515.1_202016-
03-01] 19 sequences; 21,758,297 total letters
Query= NC_022646.1
Length=101818
Score E
Sequences producing significant alignments: (Bits) Value
seq1 131 1e-25
seq2 114 8e-21
>seq1
Length=4845111
Score = 131 bits (144), Expect = 1e-25
Identities = 156/212 (74%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||| || |||| |||| ||||||||| ||||| || || || || | || ||||
Sbjct 2006969 AGGACGAGATGAAGGGTGGACTCCTTCTGGATGTTGTAATCAGACAGAGTTCGTCCATCC 2007028
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|| || ||||| ||||||||||| ||||| |||||||| | || | |||||||||||
Sbjct 2007029 TCAAGCTGCTTACCGGCGAAGATAAGTCGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCC 2007088
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945
| || || |||||| | || | ||| | ||| || || | ||| ||||||
Sbjct 2007089 TGAATCTTAGACTTGACGTTGTCAATGGTGTCAGAAGACTCAACCTCGAGGGTGATGGTC 2007148
Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
||||| || || ||||| ||||||||||||||
Sbjct 2007149 TTTCCAGTCAGAGTCTTGACAAAGATCTGCAT 2007180
Score = 125 bits (138), Expect = 5e-24
Identities = 155/212 (73%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||| || |||| |||| ||||||||| ||||| ||||| || || | || | ||
Sbjct 2007425 AGGACAAGATGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGACAGAGTTCGTCCGTCC 2007484
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|| || |||||||| ||||| || ||||| |||||||| | || | |||||||||||
Sbjct 2007485 TCAAGCTGCTTTCCAGCGAAAATGAGTCGCTGCTGGTCCGGGGGGATTCCCTCCTTGTCC 2007544
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945
| || || |||||| | || | ||| | |||||| |||| ||| || |||
Sbjct 2007545 TGAATCTTGGACTTGACGTTGTCAATGGTGTCAGAAGACTCGACCTCAAGGGTGATAGTC 2007604
Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|| || || |||||||| || |||||||||||
Sbjct 2007605 TTGCCGGTCAGGGTCTTGACGAAGATCTGCAT 2007636
Score = 122 bits (134), Expect = 6e-23
Identities = 154/212 (73%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
|| || ||||| | ||| |||||||| ||||||||||| || ||| | || | ||
Sbjct 2006546 AGCACAAGGTGGAGAGTGGATTCCTTCTGGATGTTATAGTCAGAAAGGGTTCGTCCGTCC 2006605
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|| || ||||| ||||||||||| ||||| |||||||| | || | |||||||||||
Sbjct 2006606 TCAAGCTGCTTACCGGCGAAGATAAGTCGCTGCTGGTCCGGGGGGATACCCTCCTTGTCC 2006665
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945
| || || |||||| | || | || || ||| || |||| || || |||
Sbjct 2006666 TGGATCTTGGACTTGACGTTGTCAATGGTGTCGGAGGACTCAACCTCAAGAGTGATAGTC 2006725
Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
||||| || || ||||| ||||||||||||||
Sbjct 2006726 TTTCCAGTCAGAGTCTTGACAAAGATCTGCAT 2006757
Score = 122 bits (134), Expect = 6e-23
Identities = 154/212 (73%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
|||||||| || | || ||||||||| ||||| ||||| || || | || ||||
Sbjct 2007197 AGGACCAGATGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGGACAGAGTTCGTCCATCT 2007256
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|| || ||||| || ||||| || ||||| |||||||| | || | |||||||||||
Sbjct 2007257 TCGAGCTGCTTACCAGCGAAAATGAGTCGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCC 2007316
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945
| || || ||||| | || | || || |||||| |||| ||| ||||||
Sbjct 2007317 TGAATCTTGGACTTGACATTGTCAATGGTGTCGGAGGACTCGACCTCAAGGGTAATGGTC 2007376
Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
||||| ||||||||||| || || ||||||||
Sbjct 2007377 TTTCCAGTGAGGGTCTTCACGAAAATCTGCAT 2007408
Score = 102 bits (112), Expect = 5e-17
Identities = 94/119 (79%), Gaps = 0/119 (0%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
|||||||| || | ||| ||||||||||||||| ||||| || ||| | || ||||
Sbjct 2007653 AGGACCAGATGGAGAGTGGACTCCTTCTGAATGTTGTAGTCGGAGAGGGTTCGGCCATCC 2007712
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884
|| || |||||||| |||||||| ||||| |||||||| | || | |||||||||||
Sbjct 2007713 TCAAGCTGCTTTCCAGCGAAGATGAGTCGCTGCTGGTCCGGGGGGATTCCCTCCTTGTC 2007771
>seq2
Length=4150472
Score = 114 bits (126), Expect = 8e-21
Identities = 153/213 (72%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824
||| || || || | ||| ||||||||| ||||| ||||| || ||| | || | ||
Sbjct 3070603 CAGAACGAGATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGAAAGGGTTCGGCCGTC 3070544
Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884
|| || ||||| ||||||||||| ||||| |||||||| | || | |||||||||||
Sbjct 3070543 CTCGAGCTGCTTACCGGCGAAGATAAGTCGCTGCTGGTCCGGGGGAATTCCCTCCTTGTC 3070484
Query 34885 GTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGT 34944
| || || |||||| | || | || | ||| || |||| ||| || ||
Sbjct 3070483 CTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATAGT 3070424
Query 34945 CTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
||| || || |||||||| ||||| ||||||||
Sbjct 3070423 CTTACCGGTAAGGGTCTTGACAAAAATCTGCAT 3070391
Score = 104 bits (114), Expect = 2e-17
Identities = 150/212 (71%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824
||| || || || | ||| ||||||||| ||||| ||||| || || | || | ||
Sbjct 3374823 CAGAACAAGATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGAGTTCGGCCGTC 3374882
Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884
|| || ||||| |||||||| || ||||| |||||||| | || | |||||||||||
Sbjct 3374883 CTCGAGCTGCTTGCCGGCGAAAATGAGTCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTC 3374942
Query 34885 GTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGT 34944
| || || |||||| | || | || | ||| || || | ||| |||||
Sbjct 3374943 CTGGATCTTGGACTTGACGTTGTCAATGGTGTCGGAAGACTCCACCTCGAGGGTGATGGT 3375002
Query 34945 CTTTCCCGTGAGGGTCTTTACAAAGATCTGCA 34976
||| || || |||||||| |||||||| ||||
Sbjct 3375003 CTTGCCAGTAAGGGTCTTGACAAAGATTTGCA 3375034
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 325692724581761
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |