Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20sp._20JCM_2030694_20[genbank_20GCA_5F001600515.1_202016-
03-01] 19 sequences; 21,758,297 total letters
Query= NC_023177.1
Length=124688
Score E
Sequences producing significant alignments: (Bits) Value
seq2 93.3 3e-14
seq1 84.2 2e-11
>seq2
Length=4150472
Score = 93.3 bits (102), Expect = 3e-14
Identities = 138/196 (70%), Gaps = 0/196 (0%)
Strand=Plus/Minus
Query 107557 TGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGCG 107616
||||||| |||||||| || | || ||||| ||||| ||| |||| |||| || ||
Sbjct 3375034 TGCAAATCTTTGTCAAGACCCTTACTGGCAAGACCATCACCCTCGAGGTGGAGTCTTCCG 3374975
Query 107617 ATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAGC 107676
| || | | | | || || ||||| || || || ||| | ||| ||| ||||
Sbjct 3374974 ACACCATTGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAGC 3374915
Query 107677 AGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAACA 107736
|| |||| |||| || || || ||||| ||||||| | ||| | | ||||||||||
Sbjct 3374914 AGCGACTCATTTTCGCCGGCAAGCAGCTCGAGGACGGCCGAACTCTCTCTGACTACAACA 3374855
Query 107737 TTCAAAAGGAGTCTAC 107752
| || |||||||| ||
Sbjct 3374854 TCCAGAAGGAGTCCAC 3374839
Score = 89.7 bits (98), Expect = 4e-13
Identities = 139/199 (70%), Gaps = 0/199 (0%)
Strand=Plus/Plus
Query 107554 AAATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTG 107613
||||||| ||||||||||| || | || || || || || ||| | || |||| ||
Sbjct 3070389 AAATGCAGATTTTTGTCAAGACCCTTACCGGTAAGACTATCACCCTTGAGGTGGAGTCTT 3070448
Query 107614 GCGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATC 107673
||| || ||| | | || || ||||| || || || || | ||| ||| |
Sbjct 3070449 CCGACACCATCGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGAATTCCCCCGGACC 3070508
Query 107674 AGCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACA 107733
||||| ||||||| | || ||||| ||||| ||||||| | ||| | | |||||||
Sbjct 3070509 AGCAGCGACTTATCTTCGCCGGTAAGCAGCTCGAGGACGGCCGAACCCTTTCTGACTACA 3070568
Query 107734 ACATTCAAAAGGAGTCTAC 107752
|||| || |||||||| ||
Sbjct 3070569 ACATCCAGAAGGAGTCCAC 3070587
>seq1
Length=4845111
Score = 84.2 bits (92), Expect = 2e-11
Identities = 100/133 (75%), Gaps = 2/133 (2%)
Strand=Plus/Plus
Query 105090 GGCTTTCACGTTCACGAGTTCGGCGATACCAGCAACGGCTGCACGTCCGCCGGCGAGCAC 105149
||||| ||||| |||||||| || || | || |||||||||||| ||||||||| |||
Sbjct 2763556 GGCTTCCACGTGCACGAGTTTGGAGACAACACCAACGGCTGCACCTCCGCCGGCCCCCAC 2763615
Query 105150 TTCAA-CCCTACGCGCCAAAATCACGGCGCTCCAGACGCCGCAGAAAGGCACGTCGGCGA 105208
||||| |||| | | | || ||||| || || ||| | | || | ||||| || ||
Sbjct 2763616 TTCAACCCCTTCAAG-AAGAACCACGGAGCCCCCAACGACACTGAGCGACACGTTGGAGA 2763674
Query 105209 CCTGGGCAATGTC 105221
||| ||||| |||
Sbjct 2763675 CCTCGGCAACGTC 2763687
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 398876707635091
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |