Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yarrowia_20sp._20JCM_2030694_20[genbank_20GCA_5F001600515.1_202016- 03-01] 19 sequences; 21,758,297 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq2 268 9e-67 seq1 125 7e-24 >seq2 Length=4150472 Score = 268 bits (296), Expect = 9e-67 Identities = 1185/1858 (64%), Gaps = 51/1858 (3%) Strand=Plus/Minus Query 147951 GTGCGCAGATAGTACATGCCCGTCTTGAGGCCCATGCGCCATGCGTAGTCGTGCACCGAC 148010 || ||||| |||||||| || |||||||| ||| | ||| ||||| ||||| || Sbjct 326304 GTTCGCAGGTAGTACATACCGGTCTTGAGACCCTTCTTCCAGCCGTAGAAGTGCATGGAA 326245 Query 148011 GACATGAGCGTGTACGTCGGGTGCGGCACAAACAGA---TTAAACGACTGGCTCTGGTCA 148067 | ||||| | | | | | || | | || || | |||||| ||||||| Sbjct 326244 G---TGAGCTTACCCATGGTGGGCTCCTTGATGTGAATGTTGAGGGACTGGGACTGGTCA 326188 Query 148068 ATGAACGCGCCACGGTCAGCGGCCATTTCAATGAGTCGCTTTATCTTCATCTCCCAGGCC 148127 ||||| | ||||| |||||||| || |||| |||||| |||||||| | Sbjct 326187 ATGAAGGGAGATCGGTCGGCGGCCATCTCGATGATTCGCTTCTGGGAAATCTCCCACACG 326128 Query 148128 GTCTTGTACAGCCGCTTGATATGATCGGGAATGCCGTCGATGCGCTGCACCGAGCCGCGG 148187 |||||||||||| |||||| | | ||| ||| | |||| |||||| || ||| | Sbjct 326127 GTCTTGTACAGCTCCTTGATCTCCTGGGGGATGTTGGGGATGTTCTGCACGGATCCGTTG 326068 Query 148188 TGCGCAAAAATCTGATTGCGCATTTCGTCCGTGTATAGGTTGAGCTCGATCAGGTCATCG 148247 | || | ||| | || ||| || | | || || ||| | ||||| | | Sbjct 326067 TCGGCGACAATTCGGTTCTTCATAGTCTCGTTCCAGAGACCGACCTCAACAAGGTCCTTG 326008 Query 148248 ATCAGATACTGATTCACCACCTGAAACTCGCCGGCGAGCACGCGCCGCAGA-TACACGTT 148306 | || | | || || | ||| ||||| ||||| || || || || ||| || | ||| Sbjct 326007 AGAAGCCAGGGGTTGACAATCTGGAACTCACCGGCAAGAACTCGTCG-AGAGTAAATGTT 325949 Query 148307 GCTCGTAAACGGTTCAAACGACTCGTTGTTGCCCAAAATCTGCGCGGTCGTTGCCGTGGG 148366 | || | || || || |||||||| ||| | |||||| | ||| | || ||||| Sbjct 325948 GGAGGTGTAAGGCTCGAAGCACTCGTTGAAGCCGAGAATCTGAGAGGTAGAAGCAGTGGG 325889 Query 148367 CATGTACGCTACCAGCAGCGAGTTGCGCAAACCGCGATTTTTTATTTTGCGCTTCAGAGC 148426 ||| || |||||||| ||||| |||| |||| | || | ||| ||| || | Sbjct 325888 CATAGGAGCGACCAGCAGAGAGTTTCGCAGACCGTGCTTGACAACCTTGGACTTGAGGTC 325829 Query 148427 CGCCCAGTCCCAGAGCGGCGACGGTGTCACGTTCCACATGTCGTACTGCAGAATGCCGCG 148486 |||| ||||||||| | || | ||||||||||||||| ||||||| || Sbjct 325828 GTCCCACTCCCAGAGCTCGGTGGGGGAAACGTTCCACATGTCGAACTGCAGGTCTCCCTT 325769 Query 148487 GCTAGCGGGGCTGCCCTCGTACGAGCTGTACGGTCCGTGCGCCGCCGCCAGTTCGCAGCT 148546 | || || ||||| | | | ||| | || | | | |||| || Sbjct 325768 GGAGGCAGGAGAGCCCTGGAAGGTCTCGTAGGCACCCTCCTCAATGGCCATCTCCATAGA 325709 Query 148547 CGCCTCGAGCGCGCCGTAGTAAATCGTCTCGGCAATTTGCCTGTTGAGCAGCGCCGCCGA 148606 ||||||| || |||| ||| || |||||| || || |||||||| | ||| Sbjct 325708 GGCCTCGACGGCTCCGTGGTAGATGGTCTCGAAGATCTGGATGTTGAGCTTCTTGGCCTC 325649 Query 148607 CTCGCTTTCGTACGGCATACGCAGCCGCACAAACGCGTCGGCAAGGCCCTGTACGCCCAC 148666 ||| || | || | |||||| || || | || || || ||||| || |||| Sbjct 325648 GTCGGACTCAAAGGGGAGACGCAGAGCCATGAAGGTATCAGCCAGACCCTGGACACCCAG 325589 Query 148667 GCCAATGGGCCGGTGTTTAATGTTGGAGAGGCGCGCGCTCTCGAGC-GGATAGTGGTTGC 148725 | ||||| |||||| |||||||| | | ||| || | || |||| ||| | Sbjct 325588 AGCGATGGGTCGGTGTCGCATGTTGGA-CTTCTTGGCCTCGGGAACGGGGTAGTAGTTTC 325530 Query 148726 GGTCGATGATCTTGTCAAGATTGCGCACCACCACCTTTGTAATTCTGCGCAGCAATTCAA 148785 |||||||||| || || || ||||| | ||||| | ||| ||||| | | Sbjct 325529 GGTCGATGATGGCGTTGAGGTTTCGCACAATGACCTTGGCAATATCATGCAGCTTCTTGA 325470 Query 148786 AATCGT------ACTTG---TCATCTACGATGCATCG-----GTTCACGGCGATAGAGGC 148831 | |||| | ||| || ||| ||| || || | || || || ||||| Sbjct 325469 AGTCGTAGAACGAGTTGGTCTCGTCT-CGAGTCA-CGAAAGTGGGCAGAGCAATGGAGGC 325412 Query 148832 TAGATTGCACACGGCCGTCTCATCCGGGGCGCTGTACTCTACGATCTCGGCGCACAGATT 148891 || ||||| ||||| |||||| || | |||||| || |||||| ||||| || Sbjct 325411 CAGGTTGCAGACGGCAACCTCATCGGGAGAAGAGTACTCGACAATCTCGCAACACAGGTT 325352 Query 148892 GCTGCATTTGATCACGCCCACGTTCTTTTGATTGCTCTTGCTGTTGCACGCGTCCTTGTA 148951 | | ||||| |||| |||||| || ||| ||| | |||||| | ||||||||| Sbjct 325351 GGAAGACTTGATGGTTCCCAGGTTCTTCTGGTTGGACTTTCGGTTGCAGGAGTCCTTGTA 325292 Query 148952 CAGCATGTACGGTCCGCCAGTTTCCACCTGCGTTTCCACTAT---GAACCGATGCAGGTC 149008 |||||| | || || | || ||| || | || | ||| ||| | Sbjct 325291 GAGCATGAAGGGGTTTCCGGACTCGGTCTGGCAGTCGAGAATGTGGTACC---ACAGCTT 325235 Query 149009 CTGCGCGCGCACTTGCTGCTCGTAG----CGACCCTCCTGCTCGTATAAAGTATACAGCC 149064 ||| ||| | | || | |||| | || ||||| ||||||| |||||| Sbjct 325234 CTGGGCGGGGA--TG--GTTCGTCGGCCTCGTCCCTCTCGCTCGTACTGCTCGTACAGCT 325179 Query 149065 GCTCGAACGCCTCGCCGTAGCAATCGTCGAGACCGGGGCACTTGTGCGGGCACATGAGCG 149124 || |||| | || |||||| ||||| ||||||||||||| || ||||||||||| | Sbjct 325178 TCTTGAACTCGTCACCGTAGACGTCGTCAAGACCGGGGCACTCGTTGGGGCACATGAGGG 325119 Query 149125 ACCACACGCCGTCCGCGTACACGCGCTTCATAAACAGATCGGGCACCCAGAGCGCGTACA 149184 |||| |||||| | | || |||| ||| ||||| ||||| | ||| || || | Sbjct 325118 TCCACTCGCCGTTCTGCTCGACTCGCTCCATGAACAGGTCGGGAATCCACAGGGCCAGGA 325059 Query 149185 TGAGGTCGCGCGCCTTGCAGTCTTCGGCGCCCATGTTGCGGCGCAGGTTG-AGCACGCTG 149243 ||||| || || | || || || ||| ||||| | | || || | | Sbjct 325058 ACAGGTCTCGGGCTCGGATCTCCTCCTTTCCGTGGTTCTTTCGCAGCTCGCAGAACTC-G 325000 Query 149244 AATATGTCCGCGTGCCACGGCTCAATGTACACCGCGAGCGCGCCCTTGCGCTTG---CCG 149300 || ||||| ||||||| ||||||| ||||| || | || || |||||| || Sbjct 324999 AAGATGTCGTCGTGCCAAGGCTCAAGGTACATGGCAAAGGCTCCGGGTCGCTTGTTACCA 324940 Query 149301 CCCTGGTCGACGTGGCGCACCATGTTGTTAAACACTCGAACCATAGGTTCAATGCCACTG 149360 |||||||| |||| || | ||||||| | ||||| | ||| || | || || || Sbjct 324939 CCCTGGTCAACGTATCGGGCAGTGTTGTTGTAGACTCGGAGCATGGGCACGATACCGTTG 324880 Query 149361 GCAGTGCCGTTAGTAGAGCTAATGCGACTGCCGCGCGCTCGCACTTTGTGCACGTTGACG 149420 | || ||||| || | |||| |||| ||||| | ||||| | | || Sbjct 324879 GAGGTACCGTTGGTGCCGGCAATGTAGGAGCCGGTGGCTCGAATGTTGTGGATGGAGAGA 324820 Query 149421 CCGATGCCGCCGCCGTACTTTGAGATGGCCGCGCAGTCGCCGAGCGTCGAGTAGATGCCC 149480 ||||| || ||| | |||| |||||| || ||| ||| || ||||||||| Sbjct 324819 CCGATACCTCCGGCAGACTTGGAGATGAGAGCACAGGTCTTGAGGGTATCGTAGATGCCG 324760 Query 149481 TCGATGCTGTCGCGCTTCATGGTCAGCAGAAAGCACGAGCACATTTGCGGAAAACGCGTG 149540 |||||| |||| ||||||| | | || || ||||| |||| || || | || Sbjct 324759 TCGATGGAGTCGTCCTTCATGTTGACGAGGAAACACGAAGACATCTGGGGCTGGGGGGTT 324700 Query 149541 CCGGCCGCGAACATGGTGGGGCTGGCGTGTGTAAAATATTTCTGGCTCATCATCTCGTAC 149600 || || | | | |||||| ||||| || || || |||||| ||| | ||| Sbjct 324699 CCAGCGTTGTAGAGAGTGGGGGAAGCGTGGGTGAAGTACTTCTGGGACATGTAGTTGTAG 324640 Query 149601 GACTCGAGCACGCGGTCCATGTCATCGCCATGGATGCCTATGGCGACGCGCATCAGCATA 149660 | ||| | | ||| | |||| || || ||||| || | | ||| ||||| | ||| Sbjct 324639 GTCTCAATGGCCCGGGCAATGTTGTCACCGTGGATACCGACAGAGACTCGCATGATCATC 324580 Query 149661 TGCTGCGGTCGCTCCGCCA---CTTTGTTTCCAATTTTGAGCAAGTAGCCGTTTTCTAGT 149717 ||||| |||||||| || | || ||| | | |||| ||| | || || Sbjct 324579 TGCTGGGGTCGCTCGGCAACAGCTCCGTT---GACTCGAAGCAGGTATGCTCGCTCCAGG 324523 Query 149718 GTCTTGTAGCCAAAGTACTTGTAGTCAAAGTCGCGGCCGTGGTCAATGGCGGCGTCGA 149775 |||||| |||||||||| |||||| ||||| ||| ||| | || ||| ||| || Sbjct 324522 GTCTTGAAGCCAAAGTAGTTGTAGGTGAAGTCTCGGTCGTAGAGAACGGCACCGTTGA 324465 Score = 132 bits (146), Expect = 5e-26 Identities = 155/206 (75%), Gaps = 5/206 (2%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGT--GGACGAGTCCTCGAGCTGCTTGC 133521 |||||||| ||||| || ||||| || | || || || |||||||||||||||| Sbjct 3374839 GTGGACTCCTTCTGGATGTTGTAGTCAGAGAGAGTTCGGCCG--TCCTCGAGCTGCTTGC 3374896 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | ||| ||||||| ||||||||||| || || ||||| |||||||| |||||| || Sbjct 3374897 CGGCGAAAATGAGTCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACT 3374956 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 ||| | |||| ||||||| | |||||| |||| ||||| ||| ||||| || || | Sbjct 3374957 TGACGTTGTCAATGGTGTCGGAAGACTCCACCTCGAGGGTGATGGTCTTGCCAGTAAGGG 3375016 Query 133642 TTTTTACGAAAATCTGCA-TGGCTTA 133666 | || || || || |||| ||| ||| Sbjct 3375017 TCTTGACAAAGATTTGCACTGGGTTA 3375042 Score = 111 bits (122), Expect = 2e-19 Identities = 145/199 (73%), Gaps = 4/199 (2%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGT--GGACGAGTCCTCGAGCTGCTTGC 133521 |||||||| ||||| || ||||| || | || || || |||||||||||||| | Sbjct 3070587 GTGGACTCCTTCTGGATGTTGTAGTCAGAAAGGGTTCGGCCG--TCCTCGAGCTGCTTAC 3070530 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | ||| | || || ||||||||||| || || || || |||||||| |||||| || Sbjct 3070529 CGGCGAAGATAAGTCGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCCTGGATCTTGGACT 3070470 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 ||| | || | ||||||| | |||||| || | ||||| || || ||||| || | Sbjct 3070469 TGACGTTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATAGTCTTACCGGTAAGGG 3070410 Query 133642 TTTTTACGAAAATCTGCAT 133660 | || || ||||||||||| Sbjct 3070409 TCTTGACAAAAATCTGCAT 3070391 >seq1 Length=4845111 Score = 125 bits (138), Expect = 7e-24 Identities = 150/204 (74%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTG 133516 ||| | ||||||||| ||||| || ||||| || || || |||||| ||||| Sbjct 2007433 ATGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGACAGAGTTCGTCCGTCCTCAAGCTG 2007492 Query 133517 CTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTT 133576 ||| || ||| ||||||| ||||||||||| || ||||| || |||||||| ||||| Sbjct 2007493 CTTTCCAGCGAAAATGAGTCGCTGCTGGTCCGGGGGGATTCCCTCCTTGTCCTGAATCTT 2007552 Query 133577 TTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGT 133636 ||||| | |||| ||||| | | ||| || || | ||||| || |||||||| Sbjct 2007553 GGACTTGACGTTGTCAATGGTGTCAGAAGACTCGACCTCAAGGGTGATAGTCTTGCCGGT 2007612 Query 133637 CAGAGTTTTTACGAAAATCTGCAT 133660 ||| || || ||||| |||||||| Sbjct 2007613 CAGGGTCTTGACGAAGATCTGCAT 2007636 Score = 125 bits (138), Expect = 7e-24 Identities = 105/129 (81%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 116476 GGCTTCCACGTGCACGAGTTTGGCGACACCAGCAACGGCTGCACCTCCGCCGGCGAACAC 116535 ||||||||||||||||||||||| |||| || |||||||||||||||||||||| ||| Sbjct 2763556 GGCTTCCACGTGCACGAGTTTGGAGACAACACCAACGGCTGCACCTCCGCCGGCCCCCAC 2763615 Query 116536 TTCAACCCCACCGGCCAGGACCACGGCGCGCCCAACGCCGCCGTTCGTCACGTCGGTGAC 116595 ||||||||| | || ||||||| || ||||||| | | | || ||||| || ||| Sbjct 2763616 TTCAACCCCTTCAAGAAGAACCACGGAGCCCCCAACGACACTGAGCGACACGTTGGAGAC 2763675 Query 116596 CTGGGCAAC 116604 || |||||| Sbjct 2763676 CTCGGCAAC 2763684 Score = 116 bits (128), Expect = 4e-21 Identities = 146/198 (74%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| ||||| || ||||| ||| || || | | | || ||||||||||| || Sbjct 2007212 GTAGACTCCTTCTGGATGTTGTAGTCGGACAGAGTTCGTCCA-TCTTCGAGCTGCTTACC 2007270 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| ||||||| ||||||||||| || || || || |||||||| ||||| ||| Sbjct 2007271 AGCGAAAATGAGTCGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCCTGAATCTTGGACTT 2007330 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | |||| ||||||| || ||| || || | ||| | ||| || || || || || Sbjct 2007331 GACATTGTCAATGGTGTCGGAGGACTCGACCTCAAGGGTAATGGTCTTTCCAGTGAGGGT 2007390 Query 133643 TTTTACGAAAATCTGCAT 133660 || |||||||||||||| Sbjct 2007391 CTTCACGAAAATCTGCAT 2007408 Score = 114 bits (126), Expect = 1e-20 Identities = 150/205 (73%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCT 133515 ||| | ||||||||| ||||| || |||||||| || || | | | ||||| |||| Sbjct 2006977 ATGAAGGGTGGACTCCTTCTGGATGTTGTAATCAGACAGAGTTCGTCCA-TCCTCAAGCT 2007035 Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCT 133575 |||| || ||| | || || ||||||||||| || || || || |||||||| |||| Sbjct 2007036 GCTTACCGGCGAAGATAAGTCGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCCTGAATCT 2007095 Query 133576 TTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGG 133635 | ||||| | |||| ||||| | | ||| || |||| ||||| ||| || || | Sbjct 2007096 TAGACTTGACGTTGTCAATGGTGTCAGAAGACTCAACCTCGAGGGTGATGGTCTTTCCAG 2007155 Query 133636 TCAGAGTTTTTACGAAAATCTGCAT 133660 ||||||| || || || |||||||| Sbjct 2007156 TCAGAGTCTTGACAAAGATCTGCAT 2007180 Score = 105 bits (116), Expect = 6e-18 Identities = 117/156 (75%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 133505 GTCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTT 133564 |||||| |||||||| || ||| | || || ||||||||||| || ||||| || ||||| Sbjct 2006602 GTCCTCAAGCTGCTTACCGGCGAAGATAAGTCGCTGCTGGTCCGGGGGGATACCCTCCTT 2006661 Query 133565 GTCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGAC 133624 ||| |||||| ||||| | |||| ||||||| || ||| || || | |||| Sbjct 2006662 GTCCTGGATCTTGGACTTGACGTTGTCAATGGTGTCGGAGGACTCAACCTCAAGAGTGAT 2006721 Query 133625 GGTTTTGCCGGTCAGAGTTTTTACGAAAATCTGCAT 133660 || || || |||||||| || || || |||||||| Sbjct 2006722 AGTCTTTCCAGTCAGAGTCTTGACAAAGATCTGCAT 2006757 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483420685187560