Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20sp._20JCM_2030694_20[genbank_20GCA_5F001600515.1_202016-
03-01] 19 sequences; 21,758,297 total letters
Query= NC_024625.1
Length=151109
Score E
Sequences producing significant alignments: (Bits) Value
seq2 268 9e-67
seq1 125 7e-24
>seq2
Length=4150472
Score = 268 bits (296), Expect = 9e-67
Identities = 1185/1858 (64%), Gaps = 51/1858 (3%)
Strand=Plus/Minus
Query 147951 GTGCGCAGATAGTACATGCCCGTCTTGAGGCCCATGCGCCATGCGTAGTCGTGCACCGAC 148010
|| ||||| |||||||| || |||||||| ||| | ||| ||||| ||||| ||
Sbjct 326304 GTTCGCAGGTAGTACATACCGGTCTTGAGACCCTTCTTCCAGCCGTAGAAGTGCATGGAA 326245
Query 148011 GACATGAGCGTGTACGTCGGGTGCGGCACAAACAGA---TTAAACGACTGGCTCTGGTCA 148067
| ||||| | | | | | || | | || || | |||||| |||||||
Sbjct 326244 G---TGAGCTTACCCATGGTGGGCTCCTTGATGTGAATGTTGAGGGACTGGGACTGGTCA 326188
Query 148068 ATGAACGCGCCACGGTCAGCGGCCATTTCAATGAGTCGCTTTATCTTCATCTCCCAGGCC 148127
||||| | ||||| |||||||| || |||| |||||| |||||||| |
Sbjct 326187 ATGAAGGGAGATCGGTCGGCGGCCATCTCGATGATTCGCTTCTGGGAAATCTCCCACACG 326128
Query 148128 GTCTTGTACAGCCGCTTGATATGATCGGGAATGCCGTCGATGCGCTGCACCGAGCCGCGG 148187
|||||||||||| |||||| | | ||| ||| | |||| |||||| || ||| |
Sbjct 326127 GTCTTGTACAGCTCCTTGATCTCCTGGGGGATGTTGGGGATGTTCTGCACGGATCCGTTG 326068
Query 148188 TGCGCAAAAATCTGATTGCGCATTTCGTCCGTGTATAGGTTGAGCTCGATCAGGTCATCG 148247
| || | ||| | || ||| || | | || || ||| | ||||| | |
Sbjct 326067 TCGGCGACAATTCGGTTCTTCATAGTCTCGTTCCAGAGACCGACCTCAACAAGGTCCTTG 326008
Query 148248 ATCAGATACTGATTCACCACCTGAAACTCGCCGGCGAGCACGCGCCGCAGA-TACACGTT 148306
| || | | || || | ||| ||||| ||||| || || || || ||| || | |||
Sbjct 326007 AGAAGCCAGGGGTTGACAATCTGGAACTCACCGGCAAGAACTCGTCG-AGAGTAAATGTT 325949
Query 148307 GCTCGTAAACGGTTCAAACGACTCGTTGTTGCCCAAAATCTGCGCGGTCGTTGCCGTGGG 148366
| || | || || || |||||||| ||| | |||||| | ||| | || |||||
Sbjct 325948 GGAGGTGTAAGGCTCGAAGCACTCGTTGAAGCCGAGAATCTGAGAGGTAGAAGCAGTGGG 325889
Query 148367 CATGTACGCTACCAGCAGCGAGTTGCGCAAACCGCGATTTTTTATTTTGCGCTTCAGAGC 148426
||| || |||||||| ||||| |||| |||| | || | ||| ||| || |
Sbjct 325888 CATAGGAGCGACCAGCAGAGAGTTTCGCAGACCGTGCTTGACAACCTTGGACTTGAGGTC 325829
Query 148427 CGCCCAGTCCCAGAGCGGCGACGGTGTCACGTTCCACATGTCGTACTGCAGAATGCCGCG 148486
|||| ||||||||| | || | ||||||||||||||| ||||||| ||
Sbjct 325828 GTCCCACTCCCAGAGCTCGGTGGGGGAAACGTTCCACATGTCGAACTGCAGGTCTCCCTT 325769
Query 148487 GCTAGCGGGGCTGCCCTCGTACGAGCTGTACGGTCCGTGCGCCGCCGCCAGTTCGCAGCT 148546
| || || ||||| | | | ||| | || | | | |||| ||
Sbjct 325768 GGAGGCAGGAGAGCCCTGGAAGGTCTCGTAGGCACCCTCCTCAATGGCCATCTCCATAGA 325709
Query 148547 CGCCTCGAGCGCGCCGTAGTAAATCGTCTCGGCAATTTGCCTGTTGAGCAGCGCCGCCGA 148606
||||||| || |||| ||| || |||||| || || |||||||| | |||
Sbjct 325708 GGCCTCGACGGCTCCGTGGTAGATGGTCTCGAAGATCTGGATGTTGAGCTTCTTGGCCTC 325649
Query 148607 CTCGCTTTCGTACGGCATACGCAGCCGCACAAACGCGTCGGCAAGGCCCTGTACGCCCAC 148666
||| || | || | |||||| || || | || || || ||||| || ||||
Sbjct 325648 GTCGGACTCAAAGGGGAGACGCAGAGCCATGAAGGTATCAGCCAGACCCTGGACACCCAG 325589
Query 148667 GCCAATGGGCCGGTGTTTAATGTTGGAGAGGCGCGCGCTCTCGAGC-GGATAGTGGTTGC 148725
| ||||| |||||| |||||||| | | ||| || | || |||| ||| |
Sbjct 325588 AGCGATGGGTCGGTGTCGCATGTTGGA-CTTCTTGGCCTCGGGAACGGGGTAGTAGTTTC 325530
Query 148726 GGTCGATGATCTTGTCAAGATTGCGCACCACCACCTTTGTAATTCTGCGCAGCAATTCAA 148785
|||||||||| || || || ||||| | ||||| | ||| ||||| | |
Sbjct 325529 GGTCGATGATGGCGTTGAGGTTTCGCACAATGACCTTGGCAATATCATGCAGCTTCTTGA 325470
Query 148786 AATCGT------ACTTG---TCATCTACGATGCATCG-----GTTCACGGCGATAGAGGC 148831
| |||| | ||| || ||| ||| || || | || || || |||||
Sbjct 325469 AGTCGTAGAACGAGTTGGTCTCGTCT-CGAGTCA-CGAAAGTGGGCAGAGCAATGGAGGC 325412
Query 148832 TAGATTGCACACGGCCGTCTCATCCGGGGCGCTGTACTCTACGATCTCGGCGCACAGATT 148891
|| ||||| ||||| |||||| || | |||||| || |||||| ||||| ||
Sbjct 325411 CAGGTTGCAGACGGCAACCTCATCGGGAGAAGAGTACTCGACAATCTCGCAACACAGGTT 325352
Query 148892 GCTGCATTTGATCACGCCCACGTTCTTTTGATTGCTCTTGCTGTTGCACGCGTCCTTGTA 148951
| | ||||| |||| |||||| || ||| ||| | |||||| | |||||||||
Sbjct 325351 GGAAGACTTGATGGTTCCCAGGTTCTTCTGGTTGGACTTTCGGTTGCAGGAGTCCTTGTA 325292
Query 148952 CAGCATGTACGGTCCGCCAGTTTCCACCTGCGTTTCCACTAT---GAACCGATGCAGGTC 149008
|||||| | || || | || ||| || | || | ||| ||| |
Sbjct 325291 GAGCATGAAGGGGTTTCCGGACTCGGTCTGGCAGTCGAGAATGTGGTACC---ACAGCTT 325235
Query 149009 CTGCGCGCGCACTTGCTGCTCGTAG----CGACCCTCCTGCTCGTATAAAGTATACAGCC 149064
||| ||| | | || | |||| | || ||||| ||||||| ||||||
Sbjct 325234 CTGGGCGGGGA--TG--GTTCGTCGGCCTCGTCCCTCTCGCTCGTACTGCTCGTACAGCT 325179
Query 149065 GCTCGAACGCCTCGCCGTAGCAATCGTCGAGACCGGGGCACTTGTGCGGGCACATGAGCG 149124
|| |||| | || |||||| ||||| ||||||||||||| || ||||||||||| |
Sbjct 325178 TCTTGAACTCGTCACCGTAGACGTCGTCAAGACCGGGGCACTCGTTGGGGCACATGAGGG 325119
Query 149125 ACCACACGCCGTCCGCGTACACGCGCTTCATAAACAGATCGGGCACCCAGAGCGCGTACA 149184
|||| |||||| | | || |||| ||| ||||| ||||| | ||| || || |
Sbjct 325118 TCCACTCGCCGTTCTGCTCGACTCGCTCCATGAACAGGTCGGGAATCCACAGGGCCAGGA 325059
Query 149185 TGAGGTCGCGCGCCTTGCAGTCTTCGGCGCCCATGTTGCGGCGCAGGTTG-AGCACGCTG 149243
||||| || || | || || || ||| ||||| | | || || | |
Sbjct 325058 ACAGGTCTCGGGCTCGGATCTCCTCCTTTCCGTGGTTCTTTCGCAGCTCGCAGAACTC-G 325000
Query 149244 AATATGTCCGCGTGCCACGGCTCAATGTACACCGCGAGCGCGCCCTTGCGCTTG---CCG 149300
|| ||||| ||||||| ||||||| ||||| || | || || |||||| ||
Sbjct 324999 AAGATGTCGTCGTGCCAAGGCTCAAGGTACATGGCAAAGGCTCCGGGTCGCTTGTTACCA 324940
Query 149301 CCCTGGTCGACGTGGCGCACCATGTTGTTAAACACTCGAACCATAGGTTCAATGCCACTG 149360
|||||||| |||| || | ||||||| | ||||| | ||| || | || || ||
Sbjct 324939 CCCTGGTCAACGTATCGGGCAGTGTTGTTGTAGACTCGGAGCATGGGCACGATACCGTTG 324880
Query 149361 GCAGTGCCGTTAGTAGAGCTAATGCGACTGCCGCGCGCTCGCACTTTGTGCACGTTGACG 149420
| || ||||| || | |||| |||| ||||| | ||||| | | ||
Sbjct 324879 GAGGTACCGTTGGTGCCGGCAATGTAGGAGCCGGTGGCTCGAATGTTGTGGATGGAGAGA 324820
Query 149421 CCGATGCCGCCGCCGTACTTTGAGATGGCCGCGCAGTCGCCGAGCGTCGAGTAGATGCCC 149480
||||| || ||| | |||| |||||| || ||| ||| || |||||||||
Sbjct 324819 CCGATACCTCCGGCAGACTTGGAGATGAGAGCACAGGTCTTGAGGGTATCGTAGATGCCG 324760
Query 149481 TCGATGCTGTCGCGCTTCATGGTCAGCAGAAAGCACGAGCACATTTGCGGAAAACGCGTG 149540
|||||| |||| ||||||| | | || || ||||| |||| || || | ||
Sbjct 324759 TCGATGGAGTCGTCCTTCATGTTGACGAGGAAACACGAAGACATCTGGGGCTGGGGGGTT 324700
Query 149541 CCGGCCGCGAACATGGTGGGGCTGGCGTGTGTAAAATATTTCTGGCTCATCATCTCGTAC 149600
|| || | | | |||||| ||||| || || || |||||| ||| | |||
Sbjct 324699 CCAGCGTTGTAGAGAGTGGGGGAAGCGTGGGTGAAGTACTTCTGGGACATGTAGTTGTAG 324640
Query 149601 GACTCGAGCACGCGGTCCATGTCATCGCCATGGATGCCTATGGCGACGCGCATCAGCATA 149660
| ||| | | ||| | |||| || || ||||| || | | ||| ||||| | |||
Sbjct 324639 GTCTCAATGGCCCGGGCAATGTTGTCACCGTGGATACCGACAGAGACTCGCATGATCATC 324580
Query 149661 TGCTGCGGTCGCTCCGCCA---CTTTGTTTCCAATTTTGAGCAAGTAGCCGTTTTCTAGT 149717
||||| |||||||| || | || ||| | | |||| ||| | || ||
Sbjct 324579 TGCTGGGGTCGCTCGGCAACAGCTCCGTT---GACTCGAAGCAGGTATGCTCGCTCCAGG 324523
Query 149718 GTCTTGTAGCCAAAGTACTTGTAGTCAAAGTCGCGGCCGTGGTCAATGGCGGCGTCGA 149775
|||||| |||||||||| |||||| ||||| ||| ||| | || ||| ||| ||
Sbjct 324522 GTCTTGAAGCCAAAGTAGTTGTAGGTGAAGTCTCGGTCGTAGAGAACGGCACCGTTGA 324465
Score = 132 bits (146), Expect = 5e-26
Identities = 155/206 (75%), Gaps = 5/206 (2%)
Strand=Plus/Plus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGT--GGACGAGTCCTCGAGCTGCTTGC 133521
|||||||| ||||| || ||||| || | || || || ||||||||||||||||
Sbjct 3374839 GTGGACTCCTTCTGGATGTTGTAGTCAGAGAGAGTTCGGCCG--TCCTCGAGCTGCTTGC 3374896
Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581
| ||| ||||||| ||||||||||| || || ||||| |||||||| |||||| ||
Sbjct 3374897 CGGCGAAAATGAGTCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACT 3374956
Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641
||| | |||| ||||||| | |||||| |||| ||||| ||| ||||| || || |
Sbjct 3374957 TGACGTTGTCAATGGTGTCGGAAGACTCCACCTCGAGGGTGATGGTCTTGCCAGTAAGGG 3375016
Query 133642 TTTTTACGAAAATCTGCA-TGGCTTA 133666
| || || || || |||| ||| |||
Sbjct 3375017 TCTTGACAAAGATTTGCACTGGGTTA 3375042
Score = 111 bits (122), Expect = 2e-19
Identities = 145/199 (73%), Gaps = 4/199 (2%)
Strand=Plus/Minus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGT--GGACGAGTCCTCGAGCTGCTTGC 133521
|||||||| ||||| || ||||| || | || || || |||||||||||||| |
Sbjct 3070587 GTGGACTCCTTCTGGATGTTGTAGTCAGAAAGGGTTCGGCCG--TCCTCGAGCTGCTTAC 3070530
Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581
| ||| | || || ||||||||||| || || || || |||||||| |||||| ||
Sbjct 3070529 CGGCGAAGATAAGTCGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCCTGGATCTTGGACT 3070470
Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641
||| | || | ||||||| | |||||| || | ||||| || || ||||| || |
Sbjct 3070469 TGACGTTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATAGTCTTACCGGTAAGGG 3070410
Query 133642 TTTTTACGAAAATCTGCAT 133660
| || || |||||||||||
Sbjct 3070409 TCTTGACAAAAATCTGCAT 3070391
>seq1
Length=4845111
Score = 125 bits (138), Expect = 7e-24
Identities = 150/204 (74%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTG 133516
||| | ||||||||| ||||| || ||||| || || || |||||| |||||
Sbjct 2007433 ATGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGACAGAGTTCGTCCGTCCTCAAGCTG 2007492
Query 133517 CTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTT 133576
||| || ||| ||||||| ||||||||||| || ||||| || |||||||| |||||
Sbjct 2007493 CTTTCCAGCGAAAATGAGTCGCTGCTGGTCCGGGGGGATTCCCTCCTTGTCCTGAATCTT 2007552
Query 133577 TTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGT 133636
||||| | |||| ||||| | | ||| || || | ||||| || ||||||||
Sbjct 2007553 GGACTTGACGTTGTCAATGGTGTCAGAAGACTCGACCTCAAGGGTGATAGTCTTGCCGGT 2007612
Query 133637 CAGAGTTTTTACGAAAATCTGCAT 133660
||| || || ||||| ||||||||
Sbjct 2007613 CAGGGTCTTGACGAAGATCTGCAT 2007636
Score = 125 bits (138), Expect = 7e-24
Identities = 105/129 (81%), Gaps = 0/129 (0%)
Strand=Plus/Plus
Query 116476 GGCTTCCACGTGCACGAGTTTGGCGACACCAGCAACGGCTGCACCTCCGCCGGCGAACAC 116535
||||||||||||||||||||||| |||| || |||||||||||||||||||||| |||
Sbjct 2763556 GGCTTCCACGTGCACGAGTTTGGAGACAACACCAACGGCTGCACCTCCGCCGGCCCCCAC 2763615
Query 116536 TTCAACCCCACCGGCCAGGACCACGGCGCGCCCAACGCCGCCGTTCGTCACGTCGGTGAC 116595
||||||||| | || ||||||| || ||||||| | | | || ||||| || |||
Sbjct 2763616 TTCAACCCCTTCAAGAAGAACCACGGAGCCCCCAACGACACTGAGCGACACGTTGGAGAC 2763675
Query 116596 CTGGGCAAC 116604
|| ||||||
Sbjct 2763676 CTCGGCAAC 2763684
Score = 116 bits (128), Expect = 4e-21
Identities = 146/198 (74%), Gaps = 2/198 (1%)
Strand=Plus/Plus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522
|| ||||| ||||| || ||||| ||| || || | | | || ||||||||||| ||
Sbjct 2007212 GTAGACTCCTTCTGGATGTTGTAGTCGGACAGAGTTCGTCCA-TCTTCGAGCTGCTTACC 2007270
Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582
||| ||||||| ||||||||||| || || || || |||||||| ||||| |||
Sbjct 2007271 AGCGAAAATGAGTCGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCCTGAATCTTGGACTT 2007330
Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642
|| | |||| ||||||| || ||| || || | ||| | ||| || || || || ||
Sbjct 2007331 GACATTGTCAATGGTGTCGGAGGACTCGACCTCAAGGGTAATGGTCTTTCCAGTGAGGGT 2007390
Query 133643 TTTTACGAAAATCTGCAT 133660
|| ||||||||||||||
Sbjct 2007391 CTTCACGAAAATCTGCAT 2007408
Score = 114 bits (126), Expect = 1e-20
Identities = 150/205 (73%), Gaps = 2/205 (1%)
Strand=Plus/Plus
Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCT 133515
||| | ||||||||| ||||| || |||||||| || || | | | ||||| ||||
Sbjct 2006977 ATGAAGGGTGGACTCCTTCTGGATGTTGTAATCAGACAGAGTTCGTCCA-TCCTCAAGCT 2007035
Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCT 133575
|||| || ||| | || || ||||||||||| || || || || |||||||| ||||
Sbjct 2007036 GCTTACCGGCGAAGATAAGTCGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCCTGAATCT 2007095
Query 133576 TTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGG 133635
| ||||| | |||| ||||| | | ||| || |||| ||||| ||| || || |
Sbjct 2007096 TAGACTTGACGTTGTCAATGGTGTCAGAAGACTCAACCTCGAGGGTGATGGTCTTTCCAG 2007155
Query 133636 TCAGAGTTTTTACGAAAATCTGCAT 133660
||||||| || || || ||||||||
Sbjct 2007156 TCAGAGTCTTGACAAAGATCTGCAT 2007180
Score = 105 bits (116), Expect = 6e-18
Identities = 117/156 (75%), Gaps = 0/156 (0%)
Strand=Plus/Plus
Query 133505 GTCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTT 133564
|||||| |||||||| || ||| | || || ||||||||||| || ||||| || |||||
Sbjct 2006602 GTCCTCAAGCTGCTTACCGGCGAAGATAAGTCGCTGCTGGTCCGGGGGGATACCCTCCTT 2006661
Query 133565 GTCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGAC 133624
||| |||||| ||||| | |||| ||||||| || ||| || || | ||||
Sbjct 2006662 GTCCTGGATCTTGGACTTGACGTTGTCAATGGTGTCGGAGGACTCAACCTCAAGAGTGAT 2006721
Query 133625 GGTTTTGCCGGTCAGAGTTTTTACGAAAATCTGCAT 133660
|| || || |||||||| || || || ||||||||
Sbjct 2006722 AGTCTTTCCAGTCAGAGTCTTGACAAAGATCTGCAT 2006757
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 483420685187560
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