Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20sp._20JCM_2030694_20[genbank_20GCA_5F001600515.1_202016-
03-01] 19 sequences; 21,758,297 total letters
Query= NC_025412.1
Length=369360
Score E
Sequences producing significant alignments: (Bits) Value
seq1 129 1e-24
seq2 107 5e-18
>seq1
Length=4845111
Score = 129 bits (142), Expect = 1e-24
Identities = 160/219 (73%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| ||| ||| || || || ||||| || ||||| | || || || |||||||
Sbjct 2007177 CAGATCTTTGTCAAGACTCTGACTGGAAAGACCATCACCCTCGAGGTTGAGTCTTCTGAC 2007118
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| | || || ||| |||||||| || || || |||||| |||||| ||
Sbjct 2007117 ACCATTGACAACGTCAAGTCTAAGATTCAGGACAAGGAGGGAATTCCCCCGGACCAGCAG 2007058
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
|||||||||||||||| |||||| | || |||||| | ||| || | ||||||||| ||
Sbjct 2007057 CGACTTATCTTCGCCGGTAAGCAGCTTGAGGATGGACGAACTCTGTCTGATTACAACATC 2006998
Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCGA 206391
||||| ||||| || ||||| || || | ||||||||
Sbjct 2006997 CAGAAGGAGTCCACCCTTCATCTCGTCCTCCGACTTCGA 2006959
Score = 107 bits (118), Expect = 5e-18
Identities = 148/207 (71%), Gaps = 0/207 (0%)
Strand=Plus/Minus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
|| || ||||| ||||| || || || | || || || || ||||| | ||
Sbjct 2007393 AAGACCCTCACTGGAAAGACCATTACCCTTGAGGTCGAGTCCTCCGACACCATTGACAAT 2007334
Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304
|| ||| |||||||| || || || |||||| |||||| || |||| || |||
Sbjct 2007333 GTCAAGTCCAAGATTCAGGACAAGGAGGGAATTCCCCCGGACCAGCAGCGACTCATTTTC 2007274
Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364
|| || |||||| | ||||||||| | ||| || |||| |||||| ||||||| ||||||
Sbjct 2007273 GCTGGTAAGCAGCTCGAAGATGGACGAACTCTGTCCGACTACAACATCCAGAAGGAGTCT 2007214
Query 206365 ACTCTTCACCTTGTTTTGAGACTTCGA 206391
||||| || || || | ||||||||
Sbjct 2007213 ACTCTCCATCTGGTCCTTCGACTTCGA 2007187
Score = 89.7 bits (98), Expect = 1e-12
Identities = 151/219 (69%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| ||| ||| || || || ||||| || |||||| | || || || || |||
Sbjct 2006754 CAGATCTTTGTCAAGACTCTGACTGGAAAGACTATCACTCTTGAGGTTGAGTCCTCCGAC 2006695
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| | || || ||| ||||| || || || || || || |||||| ||
Sbjct 2006694 ACCATTGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCAGCAG 2006635
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
|||||||||||||||| |||||| | || || ||| | || | | || || ||| ||
Sbjct 2006634 CGACTTATCTTCGCCGGTAAGCAGCTTGAGGACGGACGAACCCTTTCTGACTATAACATC 2006575
Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCGA 206391
||||| || || ||||| |||||||| | |||| |||
Sbjct 2006574 CAGAAGGAATCCACTCTCCACCTTGTGCTCCGACTCCGA 2006536
Score = 86.0 bits (94), Expect = 1e-11
Identities = 82/105 (78%), Gaps = 0/105 (0%)
Strand=Plus/Plus
Query 204751 TCGAAGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGT 204810
|||||||| | || || ||||| || ||||| ||||||| || || |||| || |||
Sbjct 2006959 TCGAAGTCGGAGGACGAGATGAAGGGTGGACTCCTTCTGGATGTTGTAATCAGACAGAGT 2007018
Query 204811 CCTTCCATCTTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTG 204855
| |||||| || |||||||| |||||||||||||| || || ||
Sbjct 2007019 TCGTCCATCCTCAAGCTGCTTACCGGCGAAGATAAGTCGCTGCTG 2007063
>seq2
Length=4150472
Score = 107 bits (118), Expect = 5e-18
Identities = 155/219 (71%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| ||| ||| || || || || || || ||||| | || ||||| ||| |||
Sbjct 3070394 CAGATTTTTGTCAAGACCCTTACCGGTAAGACTATCACCCTTGAGGTGGAGTCTTCCGAC 3070453
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| |||| || ||| ||||| || || || || |||||| |||||| ||
Sbjct 3070454 ACCATCGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGAATTCCCCCGGACCAGCAG 3070513
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
|||||||||||||||| |||||| | || || || | || | | || |||||| ||
Sbjct 3070514 CGACTTATCTTCGCCGGTAAGCAGCTCGAGGACGGCCGAACCCTTTCTGACTACAACATC 3070573
Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCGA 206391
||||| ||||| ||||| || || ||| || |||| |||
Sbjct 3070574 CAGAAGGAGTCCACTCTCCATCTCGTTCTGCGACTCCGA 3070612
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1181820512300499
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |