Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20sp._20JCM_2030694_20[genbank_20GCA_5F001600515.1_202016-
03-01] 19 sequences; 21,758,297 total letters
Query= NC_026440.1
Length=2243109
Score E
Sequences producing significant alignments: (Bits) Value
seq6 214 3e-49
seq2 167 3e-35
seq1 111 2e-18
>seq6
Length=2655350
Score = 214 bits (236), Expect = 3e-49
Identities = 399/571 (70%), Gaps = 20/571 (4%)
Strand=Plus/Plus
Query 1455715 CGAGCCGCTGCTGCGCGATAAC--CCGAACCGCTTTGTCCTGTTCCCCATCCGCTACCAG 1455772
|||||| ||||| || ||| |||| || ||||| || ||||| || | |||||
Sbjct 574292 CGAGCCTCTGCTCAAGGAGAACAACCGA--CGGTTTGTGCTCTTCCCTATTCAGTACCAT 574349
Query 1455773 CGGATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGA 1455832
||| ||| | |||||| || ||||||||||| || || ||||||||||||||| | ||
Sbjct 574350 GAGATTTGGCAGATGTAC-AAGAAGGCCGAGGCTTCTTTCTGGACCGCCGAGGAGATTGA 574408
Query 1455833 CCTCGGCGCCGACACGGTCCACTGGGTG---TCGCTGAGCGACGACGAGCGCCATTTCAT 1455889
|||||| || | || | |||||| | ||| | | ||||||| ||||||
Sbjct 574409 TCTCGGCAAGGATATGGGCGACTGGGAGAACCGGCTCAACAGCGACGAGAAGTTTTTCAT 574468
Query 1455890 CAAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCG 1455949
|||||| || | |||| || || ||| || || || || ||||||||||| |
Sbjct 574469 TTCGCACGTGCT-GGCTTTCTTTGCTGCCTCTGACGGTATTGTCAACGAGAACCTGGTTG 574527
Query 1455950 -GCCGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATC 1456008
|| | | | || |||||| || || ||||| | || ||||| |||||||||
Sbjct 574528 AGCGGTTCTCTG-GAGAGGTTCAGGCTCCTGAGGCCAAGTGCTTCTACGGATTCCAGATC 574586
Query 1456009 GCCATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGAC 1456068
|| || |||||||| || || |||||||| || || || || || ||| ||||||||
Sbjct 574587 ATGATGGAGAACATCCATTCCGAGACCTACTCTCTGCTCATTGATACTTACATCAAGGAC 574646
Query 1456069 CCGGTCGAGAAG-GACC--ACCTCTTTCGCGCCATCGACACGGTGCCGTCGGTGAGGAAA 1456125
|| | || || || | |||| || |||||| || || | || | | | |||
Sbjct 574647 CC---CAAGGAGCGAACTTACCTGTTCAACGCCATTGAGACCATTCCCTGCATCAAGAAG 574703
Query 1456126 AAGGCCGACTGGGCGATGAAGTGGATCAACAAGGAGGGCCTCGACACTTTGCCGAGCGGC 1456185
|||||||||||||| | ||||||||| | | || | || || ||||| |||||| |
Sbjct 574704 AAGGCCGACTGGGCTCTCAAGTGGATCTCCGACGA-CGAGTCTAC-CTTTGGCGAGCGAC 574761
Query 1456186 TCGTCGGCTTTGCCG-CGTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCGCCATCTTTT 1456244
| ||| |||||| | ||| ||||| || || ||||| || ||| | |||| || |
Sbjct 574762 TTATCGCCTTTGCTGCCGTTGAGGGTATTTTCTTCTCCGGATCTTTTGCCTCCATTTTCT 574821
Query 1456245 GGCTCAAGAAGCGCGGCCTCATGCCCGGTCT 1456275
||||||||||||| || |||||||| || ||
Sbjct 574822 GGCTCAAGAAGCGAGGTCTCATGCCTGGCCT 574852
>seq2
Length=4150472
Score = 167 bits (184), Expect = 3e-35
Identities = 217/300 (72%), Gaps = 0/300 (0%)
Strand=Plus/Plus
Query 259883 ACCTACGAGGCCATGTCGCAGCAGTTGTTCACCTCAGCGACGCCCACGCTCTTTAATGCC 259942
|||||| | |||||| ||| ||| |||||| || | ||||| |||| || ||
Sbjct 324638 ACCTACAACTACATGTCCCAGAAGTACTTCACCCACGCTTCCCCCACTCTCTACAACGCT 324697
Query 259943 GGCACGCCGCGCCCGCAGAATTCGTCGTGCTTTCTGTTGGACATGAAGGCCGATTCGATC 260002
|| || || | || |||| || ||||| || || | ||||||||| ||| || |||
Sbjct 324698 GGAACCCCCCAGCCCCAGATGTCTTCGTGTTTCCTCGTCAACATGAAGGACGACTCCATC 324757
Query 260003 GAGGGCATCTATGACACGCTCAAGCAGTGCGCGCTCATCTCCAAGGCGGCCGGCGGCATC 260062
|| |||||||| || || |||||| || || |||||||||||| | ||||| || |||
Sbjct 324758 GACGGCATCTACGATACCCTCAAGACCTGTGCTCTCATCTCCAAGTCTGCCGGAGGTATC 324817
Query 260063 GGTTTTGCCGCACACAAGGTGCGCGCCGCGGGCGCCTACGTGGCGGGCACCAACGGCCAG 260122
||| | || ||||| | || ||| | ||| ||||| | || |||||||||||
Sbjct 324818 GGTCTCTCCATCCACAACATTCGAGCCACCGGCTCCTACATTGCCGGCACCAACGGTACC 324877
Query 260123 TCCAACGGCCTTGTGCCCATGCTTCGCGTTTTTAACGACACGGCGCGCTACGTCGACCAG 260182
|||||||| | ||||||||||| || || | ||| |||| || || ||||| ||||||
Sbjct 324878 TCCAACGGTATCGTGCCCATGCTCCGAGTCTACAACAACACTGCCCGATACGTTGACCAG 324937
>seq1
Length=4845111
Score = 111 bits (122), Expect = 2e-18
Identities = 162/228 (71%), Gaps = 6/228 (3%)
Strand=Plus/Minus
Query 724899 TACTCGTCCTTTATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCC 724958
||||| || | |||||||||||||| |||||| |||||| |||| | |||
Sbjct 761191 TACTCTTCTTACATCTACAAGGTGCTGAAGCAGACCCACCCCGACACCGGT-----ATC- 761138
Query 724959 TCCAACAAGTCCATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGC 725018
|||| | ||||||| ||||||||||| ||||||||||| || |||| || | | |
Sbjct 761137 TCCACCCGAGCCATGTCCATCATGAACTCCTTTGTCAACGATATCTTCGAGCGTGTTGCC 761078
Query 725019 ACCGAGGCCGGTCGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATC 725078
||||||||| ||||| || || |||| ||| ||| | || ||||||
Sbjct 761077 ACCGAGGCCTCCAAGCTGGCCACCTACACCAAGAAGTCCACCATCACTTCTCGAGAGATC 761018
Query 725079 CAGACCGCCGTGCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCC 725126
||||| ||||| || || ||| | | ||| || ||||||| |||||||
Sbjct 761017 CAGACTGCCGTCCGACTTATCCTCCCCGGAGAGCTGGCCAAGCACGCC 760970
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7177809367415078
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